RNA–Protein interactions for RNA: ENST00000556054.5

APEX1-212, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-212ENST00000556054 DNM2P50570 870 aa13.28□□□□□ -0.28
APEX1-212ENST00000556054 POU5F1BQ06416 359 aa13.28□□□□□ -0.28
APEX1-212ENST00000556054 COASYQ13057 564 aa13.28□□□□□ -0.28
APEX1-212ENST00000556054 ALCAMQ13740 583 aa13.28□□□□□ -0.28
APEX1-212ENST00000556054 MXD4Q14582 209 aaPredicted RBP13.28□□□□□ -0.28
APEX1-212ENST00000556054 PPP2R5AQ15172 486 aa13.28□□□□□ -0.28
APEX1-212ENST00000556054 STX1AQ16623 288 aa13.28□□□□□ -0.28
APEX1-212ENST00000556054 HERC4Q5GLZ8 1057 aaPredicted RBP13.28□□□□□ -0.28
APEX1-212ENST00000556054 MARCH8Q5T0T0 291 aa13.28□□□□□ -0.28
APEX1-212ENST00000556054 FOXR2Q6PJQ5 311 aa13.28□□□□□ -0.28
APEX1-212ENST00000556054 MTHFD1LQ6UB35 978 aa13.28□□□□□ -0.28
APEX1-212ENST00000556054 LRSAM1Q6UWE0 723 aa13.28□□□□□ -0.28
APEX1-212ENST00000556054 SLC43A3Q8NBI5 491 aa13.28□□□□□ -0.28
APEX1-212ENST00000556054 GLT1D1Q96MS3 346 aa13.28□□□□□ -0.28
APEX1-212ENST00000556054 DEFB118Q96PH6 123 aa13.28□□□□□ -0.28
APEX1-212ENST00000556054 TRIP12Q14669 1992 aaPredicted RBP13.28□□□□□ -0.28
APEX1-212ENST00000556054 NPHP3-ACAD11A0A0J9YXS1 232 aa13.27□□□□□ -0.29
APEX1-212ENST00000556054 SMIM35A0A1B0GVV1 85 aa13.27□□□□□ -0.29
APEX1-212ENST00000556054 H0YCG3 227 aa13.27□□□□□ -0.29
APEX1-212ENST00000556054 KIF20AO95235 890 aa13.27□□□□□ -0.29
APEX1-212ENST00000556054 GJA8P48165 433 aa13.27□□□□□ -0.29
APEX1-212ENST00000556054 TYRO3Q06418 890 aa13.27□□□□□ -0.29
APEX1-212ENST00000556054 NBPF20Q3BBV1 942 aa13.27□□□□□ -0.29
APEX1-212ENST00000556054 FAM26FQ5R3K3 315 aa13.27□□□□□ -0.29
APEX1-212ENST00000556054 RPAINQ86UA6 219 aa13.27□□□□□ -0.29
APEX1-212ENST00000556054 C7orf31Q8N865 590 aa13.27□□□□□ -0.29
APEX1-212ENST00000556054 LMBR1Q8WVP7 490 aa13.27□□□□□ -0.29
APEX1-212ENST00000556054 ERCC4Q92889 916 aaPredicted RBP13.27□□□□□ -0.29
APEX1-212ENST00000556054 HDAC6Q9UBN7 1215 aa13.27□□□□□ -0.29
APEX1-212ENST00000556054 GTF2IRD1Q9UHL9 959 aa13.27□□□□□ -0.29
APEX1-212ENST00000556054 DACH1Q9UI36 760 aa13.27□□□□□ -0.29
APEX1-212ENST00000556054 PHLPP2Q6ZVD8 1323 aa13.27□□□□□ -0.29
APEX1-212ENST00000556054 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.26□□□□□ -0.29
APEX1-212ENST00000556054 C17orf102A2RUQ5 167 aa13.26□□□□□ -0.29
APEX1-212ENST00000556054 RSPH10B2B2RC85 870 aa13.26□□□□□ -0.29
APEX1-212ENST00000556054 EIF3DO15371 548 aaKnown RBP eCLIP13.26□□□□□ -0.295e-15■■□□□ 13.2
APEX1-212ENST00000556054 GRIN2DO15399 1336 aa13.26□□□□□ -0.29
APEX1-212ENST00000556054 UBE4BO95155 1302 aa13.26□□□□□ -0.29
APEX1-212ENST00000556054 RSPH10BP0C881 870 aa13.26□□□□□ -0.29
APEX1-212ENST00000556054 BMP6P22004 513 aa13.26□□□□□ -0.29
APEX1-212ENST00000556054 NAMPTP43490 491 aa13.26□□□□□ -0.29
APEX1-212ENST00000556054 SMTNP53814 917 aa13.26□□□□□ -0.29
APEX1-212ENST00000556054 NCKAP1LP55160 1127 aa13.26□□□□□ -0.29
APEX1-212ENST00000556054 MKRN4PQ13434 485 aaPredicted RBP13.26□□□□□ -0.29
APEX1-212ENST00000556054 FAM102BQ5T8I3 360 aa13.26□□□□□ -0.29
APEX1-212ENST00000556054 EFCAB12Q6NXP0 572 aa13.26□□□□□ -0.29
APEX1-212ENST00000556054 TAF2Q6P1X5 1199 aa13.26□□□□□ -0.29
APEX1-212ENST00000556054 STXBP4Q6ZWJ1 553 aa13.26□□□□□ -0.29
APEX1-212ENST00000556054 EPM2AIP1Q7L775 607 aaPredicted RBP13.26□□□□□ -0.29
APEX1-212ENST00000556054 ZNF720Q7Z2F6 126 aa13.26□□□□□ -0.29
APEX1-212ENST00000556054 TRMT1LQ7Z2T5 733 aaKnown RBP13.26□□□□□ -0.29
APEX1-212ENST00000556054 NME8Q8N427 588 aa13.26□□□□□ -0.29
APEX1-212ENST00000556054 GUF1Q8N442 669 aaKnown RBP13.26□□□□□ -0.29
APEX1-212ENST00000556054 MYCT1Q8N699 235 aa13.26□□□□□ -0.29
APEX1-212ENST00000556054 U2AF1L4Q8WU68 220 aaKnown RBP13.26□□□□□ -0.29
APEX1-212ENST00000556054 PSPC1Q8WXF1 523 aaKnown RBP13.26□□□□□ -0.29
APEX1-212ENST00000556054 HVCN1Q96D96 273 aa13.26□□□□□ -0.29
APEX1-212ENST00000556054 IFT74Q96LB3 600 aa13.26□□□□□ -0.29
APEX1-212ENST00000556054 FIZ1Q96SL8 496 aa13.26□□□□□ -0.29
APEX1-212ENST00000556054 SH2D3AQ9BRG2 576 aa13.26□□□□□ -0.29
APEX1-212ENST00000556054 STRA6Q9BX79 667 aa13.26□□□□□ -0.29
APEX1-212ENST00000556054 NFKBIZQ9BYH8 718 aa13.26□□□□□ -0.29
APEX1-212ENST00000556054 GZF1Q9H116 711 aaPredicted RBP13.26□□□□□ -0.29
APEX1-212ENST00000556054 SETD4Q9NVD3 440 aa13.26□□□□□ -0.29
APEX1-212ENST00000556054 A0A0U1RQG5 324 aaPredicted RBP13.25□□□□□ -0.29
APEX1-212ENST00000556054 A0A1W2PQ45 241 aaPredicted RBP13.25□□□□□ -0.29
APEX1-212ENST00000556054 A0A1W2PQY0 241 aa13.25□□□□□ -0.29
APEX1-212ENST00000556054 ERCC5P28715 1186 aaPredicted RBP13.25□□□□□ -0.29
APEX1-212ENST00000556054 RAD51AP2Q09MP3 1159 aa13.25□□□□□ -0.29
APEX1-212ENST00000556054 STK4Q13043 487 aa13.25□□□□□ -0.29
APEX1-212ENST00000556054 DMP1Q13316 513 aaPredicted RBP13.25□□□□□ -0.29
APEX1-212ENST00000556054 STIM1Q13586 685 aa13.25□□□□□ -0.29
APEX1-212ENST00000556054 ITGA7Q13683 1181 aa13.25□□□□□ -0.29
APEX1-212ENST00000556054 BMT2Q1RMZ1 405 aa13.25□□□□□ -0.29
APEX1-212ENST00000556054 ODR4Q5SWX8 454 aa13.25□□□□□ -0.29
APEX1-212ENST00000556054 C1orf53Q5VUE5 145 aa13.25□□□□□ -0.29
APEX1-212ENST00000556054 SFR1Q86XK3 245 aa13.25□□□□□ -0.29
APEX1-212ENST00000556054 IFNLR1Q8IU57 520 aaPredicted RBP13.25□□□□□ -0.29
APEX1-212ENST00000556054 FAM178BQ8IXR5 827 aa13.25□□□□□ -0.29
APEX1-212ENST00000556054 ADSSL1Q8N142 457 aa13.25□□□□□ -0.29
APEX1-212ENST00000556054 ZNF507Q8TCN5 953 aa13.25□□□□□ -0.29
APEX1-212ENST00000556054 TRAPPC12Q8WVT3 735 aa13.25□□□□□ -0.29
APEX1-212ENST00000556054 DHTKD1Q96HY7 919 aaPredicted RBP13.25□□□□□ -0.29
APEX1-212ENST00000556054 BPIFA3Q9BQP9 254 aa13.25□□□□□ -0.29
APEX1-212ENST00000556054 MCOLN1Q9GZU1 580 aa13.25□□□□□ -0.29
APEX1-212ENST00000556054 NAT10Q9H0A0 1025 aaKnown RBP13.25□□□□□ -0.29
APEX1-212ENST00000556054 POLR3FQ9H1D9 316 aaPredicted RBP13.25□□□□□ -0.29
APEX1-212ENST00000556054 SUCLA2Q9P2R7 463 aaPredicted RBP13.25□□□□□ -0.29
APEX1-212ENST00000556054 PCDHB13Q9Y5F0 798 aa13.25□□□□□ -0.29
APEX1-212ENST00000556054 ARVCFO00192 962 aa13.24□□□□□ -0.29
APEX1-212ENST00000556054 BIN1O00499 593 aa13.24□□□□□ -0.29
APEX1-212ENST00000556054 PPP1R37O75864 691 aa13.24□□□□□ -0.29
APEX1-212ENST00000556054 GLRA2P23416 452 aa13.24□□□□□ -0.29
APEX1-212ENST00000556054 NPTX2P47972 431 aa13.24□□□□□ -0.29
APEX1-212ENST00000556054 CDK7P50613 346 aa13.24□□□□□ -0.29
APEX1-212ENST00000556054 IGBP1P78318 339 aa13.24□□□□□ -0.29
APEX1-212ENST00000556054 GTF2BQ00403 316 aa13.24□□□□□ -0.29
APEX1-212ENST00000556054 CACNB1Q02641 598 aaPredicted RBP13.24□□□□□ -0.29
APEX1-212ENST00000556054 TFDP1Q14186 410 aa13.24□□□□□ -0.29
APEX1-212ENST00000556054 KIAA0319LQ8IZA0 1049 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms