RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 JAM2P57087 298 aa8.41□□□□□ -1.06
CHD8-209ENST00000555935 MECOMQ03112 1051 aa8.41□□□□□ -1.06
CHD8-209ENST00000555935 PPATQ06203 517 aa8.41□□□□□ -1.06
CHD8-209ENST00000555935 ACVR2BQ13705 512 aa8.41□□□□□ -1.06
CHD8-209ENST00000555935 HYIQ5T013 277 aa8.41□□□□□ -1.06
CHD8-209ENST00000555935 KCNK18Q7Z418 384 aa8.41□□□□□ -1.06
CHD8-209ENST00000555935 KIF2BQ8N4N8 673 aa8.41□□□□□ -1.06
CHD8-209ENST00000555935 GRAMD1AQ96CP6 724 aa8.41□□□□□ -1.06
CHD8-209ENST00000555935 SEMA4AQ9H3S1 761 aa8.41□□□□□ -1.06
CHD8-209ENST00000555935 TXLNGQ9NUQ3 528 aa8.41□□□□□ -1.06
CHD8-209ENST00000555935 FGFR1OP2Q9NVK5 253 aa8.41□□□□□ -1.06
CHD8-209ENST00000555935 ARMCX3Q9UH62 379 aaPredicted RBP8.41□□□□□ -1.06
CHD8-209ENST00000555935 SNX24Q9Y343 169 aa8.41□□□□□ -1.06
CHD8-209ENST00000555935 NR2E1Q9Y466 385 aa8.41□□□□□ -1.06
CHD8-209ENST00000555935 PCDHA2Q9Y5H9 948 aa8.41□□□□□ -1.06
CHD8-209ENST00000555935 KIAA1551Q9HCM1 1747 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 TOGARAM1Q9Y4F4 1720 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 SYNGAP1Q96PV0 1343 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 POTEMA6NI47 508 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 UNC5CO95185 931 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 GGPS1O95749 300 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 TSPY3P0CV98 308 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 TSPY8P0CW00 308 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 SLC9A1P19634 815 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 CTCFP49711 727 aaPredicted RBP8.4□□□□□ -1.06
CHD8-209ENST00000555935 ROR2Q01974 943 aaKnown RBP8.4□□□□□ -1.06
CHD8-209ENST00000555935 LBRQ14739 615 aaKnown RBP8.4□□□□□ -1.06
CHD8-209ENST00000555935 SGSM1Q2NKQ1 1148 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 C12orf60Q5U649 245 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 DCAF12L1Q5VU92 463 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 NUGGCQ68CJ6 796 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 CHADLQ6NUI6 762 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 BARGINQ6ZT62 677 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 TRMT10CQ7L0Y3 403 aaKnown RBP8.4□□□□□ -1.06
CHD8-209ENST00000555935 EXOC3L1Q86VI1 746 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 NELFCDQ8IXH7 590 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 RBM46Q8TBY0 533 aaKnown RBP8.4□□□□□ -1.06
CHD8-209ENST00000555935 EPS8L3Q8TE67 593 aaKnown RBP8.4□□□□□ -1.06
CHD8-209ENST00000555935 U2AF1L4Q8WU68 220 aaKnown RBP8.4□□□□□ -1.06
CHD8-209ENST00000555935 SCFD1Q8WVM8 642 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 CKAP2Q8WWK9 683 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 SERPINB12Q96P63 405 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 TSC22D3Q99576 134 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 MXD3Q9BW11 206 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 CCDC113Q9H0I3 377 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 RNPEPL1Q9HAU8 725 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 EMILIN3Q9NT22 766 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 USP40Q9NVE5 1235 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 MCM9Q9NXL9 1143 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 KLHL14Q9P2G3 628 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 PCYOX1Q9UHG3 505 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 SLIT2O94813 1529 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 NUP98P52948 1817 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 SHANK3Q9BYB0 1731 aa8.4□□□□□ -1.06
CHD8-209ENST00000555935 GTPBP10A4D1E9 387 aaKnown RBP8.4□□□□□ -1.07
CHD8-209ENST00000555935 A8MUI8 341 aa8.4□□□□□ -1.07
CHD8-209ENST00000555935 XRCC5P13010 732 aaKnown RBP8.4□□□□□ -1.07
CHD8-209ENST00000555935 GNAZP19086 355 aa8.4□□□□□ -1.07
CHD8-209ENST00000555935 CALB2P22676 271 aa8.4□□□□□ -1.07
CHD8-209ENST00000555935 NR2F2P24468 414 aa8.4□□□□□ -1.07
CHD8-209ENST00000555935 CDC25CP30307 473 aa8.4□□□□□ -1.07
CHD8-209ENST00000555935 PTGIRP43119 386 aa8.4□□□□□ -1.07
CHD8-209ENST00000555935 PAPOLAP51003 745 aaKnown RBP8.4□□□□□ -1.07
CHD8-209ENST00000555935 RAB27AP51159 221 aa8.4□□□□□ -1.07
CHD8-209ENST00000555935 SF3A3Q12874 501 aaKnown RBP eCLIP8.4□□□□□ -1.078e-7■□□□□ 10.2
CHD8-209ENST00000555935 PRPF4BQ13523 1007 aaKnown RBP8.4□□□□□ -1.07
CHD8-209ENST00000555935 EPHA7Q15375 998 aa8.4□□□□□ -1.07
CHD8-209ENST00000555935 PDCD2Q16342 344 aaPredicted RBP8.4□□□□□ -1.07
CHD8-209ENST00000555935 CWF19L1Q69YN2 538 aaKnown RBP8.4□□□□□ -1.07
CHD8-209ENST00000555935 AGGF1Q8N302 714 aaeCLIP8.4□□□□□ -1.07
CHD8-209ENST00000555935 FITM2Q8N6M3 262 aa8.4□□□□□ -1.07
CHD8-209ENST00000555935 CFAP61Q8NHU2 1237 aa8.4□□□□□ -1.07
CHD8-209ENST00000555935 ZFAND2BQ8WV99 257 aa8.4□□□□□ -1.07
CHD8-209ENST00000555935 CTNNBL1Q8WYA6 563 aaPredicted RBP8.4□□□□□ -1.07
CHD8-209ENST00000555935 GLG1Q92896 1179 aa8.4□□□□□ -1.07
CHD8-209ENST00000555935 TMEM47Q9BQJ4 181 aa8.4□□□□□ -1.07
CHD8-209ENST00000555935 KANSL2Q9H9L4 492 aa8.4□□□□□ -1.07
CHD8-209ENST00000555935 MKNK2Q9HBH9 465 aa8.4□□□□□ -1.07
CHD8-209ENST00000555935 METTL14Q9HCE5 456 aaKnown RBP8.4□□□□□ -1.07
CHD8-209ENST00000555935 TRAF3IP3Q9Y228 551 aa8.4□□□□□ -1.07
CHD8-209ENST00000555935 MYH4Q9Y623 1939 aa8.4□□□□□ -1.07
CHD8-209ENST00000555935 TMEM120BA0PK00 339 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 POTEFA5A3E0 1075 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 MIF4GDA9UHW6 222 aaKnown RBP8.39□□□□□ -1.07
CHD8-209ENST00000555935 SLC37A4O43826 429 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 POTEIP0CG38 1075 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 POTEJP0CG39 1038 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 KRT13P13646 458 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 ATF3P18847 181 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 ATP6V1C1P21283 382 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 CNGA1P29973 690 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 STAT1P42224 750 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 RPL21P46778 160 aaKnown RBP8.39□□□□□ -1.07
CHD8-209ENST00000555935 HERC4Q5GLZ8 1057 aaPredicted RBP8.39□□□□□ -1.07
CHD8-209ENST00000555935 POTEEQ6S8J3 1075 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 CYFIP1Q7L576 1253 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 APBB1IPQ7Z5R6 666 aaPredicted RBP8.39□□□□□ -1.07
CHD8-209ENST00000555935 SLC30A5Q8TAD4 765 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 SLC35G2Q8TBE7 412 aa8.39□□□□□ -1.07
CHD8-209ENST00000555935 SH3TC2Q8TF17 1288 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms