RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 NAALADL2Q58DX5 795 aa13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 POTEGQ6S5H5 508 aa13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 ABHD15Q6UXT9 468 aa13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 CATSPER3Q86XQ3 398 aa13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 DHX37Q8IY37 1157 aaKnown RBP13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 PPTC7Q8NI37 304 aa13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 GPR20Q99678 358 aa13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 MLXIPQ9HAP2 919 aa13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 TUFT1Q9NNX1 390 aa13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 WRAP73Q9P2S5 460 aaPredicted RBP13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 PCDHA10Q9Y5I2 948 aa13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 ARID2Q68CP9 1835 aa13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 LINC01553A4QN01 128 aa13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 PROB1E7EW31 1015 aa13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 POLR2DO15514 142 aaKnown RBP13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 ACTN4O43707 911 aaKnown RBP13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 SLITRK3O94933 977 aa13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 IQCF3P0C7M6 154 aa13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 MUTP22033 750 aa13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 UGCGQ16739 394 aa13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 PDXDC2PQ6P474 469 aa13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 KCNK18Q7Z418 384 aa13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 TLK2Q86UE8 772 aa13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 RNF135Q8IUD6 432 aa13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 CCDC60Q8IWA6 550 aaPredicted RBP13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 PDILTQ8N807 584 aa13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 CALML4Q96GE6 196 aa13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 DYDC2Q96IM9 177 aa13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 SPATA33Q96N06 139 aa13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 TGS1Q96RS0 853 aaKnown RBP13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 PCYT2Q99447 389 aa13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 PYM1Q9BRP8 204 aaKnown RBP13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 LXNQ9BS40 222 aa13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 DACT1Q9NYF0 836 aa13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 RGL1Q9NZL6 768 aa13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 CCDC39Q9UFE4 941 aa13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 Q9Y3F1 56 aa13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 SAMM50Q9Y512 469 aa13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 EMSYQ7Z589 1322 aa13.09□□□□□ -0.31
MTHFD1-211ENST00000555709 TMEM221A6NGB7 291 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 M0R296 226 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 NOP56O00567 594 aaKnown RBP13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 LGR5O75473 907 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 KRT37O76014 449 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 ZNF202O95125 648 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 LYPLA2O95372 231 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 PSAPP07602 524 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 MMP3P08254 477 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 TCF7P36402 384 aaPredicted RBP13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 STAT6P42226 847 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 WDR5P61964 334 aaKnown RBP13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 CTTNQ14247 550 aaKnown RBP13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 MIS18BP1Q6P0N0 1132 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 TRIM67Q6ZTA4 783 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 ASCL5Q7RTU5 278 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 KCTD17Q8N5Z5 321 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 BANK1Q8NDB2 785 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 OR6J1Q8NGC5 347 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 AFAP1L1Q8TED9 768 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 AFG1LQ8WV93 481 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 SEPT1Q8WYJ6 367 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 PBXIP1Q96AQ6 731 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 DHX58Q96C10 678 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 PABPC5Q96DU9 382 aaKnown RBP13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 NT5C3AQ9H0P0 336 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 BLOC1S4Q9NUP1 217 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 DDX19AQ9NUU7 478 aaKnown RBP13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 STK17AQ9UEE5 414 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 FAM50BQ9Y247 325 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 VPS13AQ96RL7 3174 aa13.08□□□□□ -0.32
MTHFD1-211ENST00000555709 DMDP11532 3685 aa13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 A6NJR5 290 aa13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 PITPNM1O00562 1244 aa13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 DYNC1LI2O43237 492 aaPredicted RBP13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 ZNF862O60290 1169 aa13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 TRAK2O60296 914 aa13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 KINO60870 393 aaKnown RBP13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 P4HBP07237 508 aaKnown RBP13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 SLFN14P0C7P3 912 aa13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 QARSP47897 775 aaKnown RBP13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 PSMC5P62195 406 aa13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 DEFB103AP81534 67 aa13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 GPNMBQ14956 572 aa13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 ZRSR1Q15695 479 aaKnown RBP13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 SKOR2Q2VWA4 1001 aaPredicted RBP13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 LONRF3Q496Y0 759 aa13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 RRAGBQ5VZM2 374 aa13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 KRBA2Q6ZNG9 492 aa13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 IQUBQ8NA54 791 aa13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 RASSF8Q8NHQ8 419 aa13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 ATP6V0A1Q93050 837 aa13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 MRPL38Q96DV4 380 aaKnown RBP13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 CDK5RAP3Q96JB5 506 aa13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 TIGD1Q96MW7 591 aa13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 PLIN2Q99541 437 aa13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 PANK2Q9BZ23 570 aa13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 CUEDC2Q9H467 287 aa13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 ZSWIM4Q9H7M6 989 aa13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 GABBR1Q9UBS5 961 aa13.07□□□□□ -0.32
MTHFD1-211ENST00000555709 USP25Q9UHP3 1055 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms