RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 PRPF6O94906 941 aaKnown RBP10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 ADCY5O95622 1261 aa10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 GNRH1P01148 92 aa10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 MYL3P08590 195 aa10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 ZNF286BP0CG31 522 aa10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 CYBAP13498 195 aa10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 ELNP15502 786 aa10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 CPT1AP50416 773 aa10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 PEX3P56589 373 aa10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 SOX10P56693 466 aa10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 CACNB2Q08289 660 aaPredicted RBP10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 TBC1D8BQ0IIM8 1120 aa10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 TRIM32Q13049 653 aa10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 ANKRD40Q6AI12 368 aa10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 TRPV1Q8NER1 839 aa10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 SCFD1Q8WVM8 642 aa10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 SLC7A3Q8WY07 619 aa10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 IFT74Q96LB3 600 aa10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 TRIM5Q9C035 493 aa10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 POLR3FQ9H1D9 316 aaPredicted RBP10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 SEMA6BQ9H3T3 888 aa10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 OCEL1Q9H607 264 aa10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 SAMSN1Q9NSI8 373 aaKnown RBP10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 TSKSQ9UJT2 592 aa10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 ZNF215Q9UL58 517 aaPredicted RBP10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 PPME1Q9Y570 386 aa10.66□□□□□ -0.7
HNRNPC-220ENST00000555585 CCDC169A6NNP5 214 aa10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 H3BRB1 525 aa10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 DUSP11O75319 330 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 MAFO75444 373 aaPredicted RBP10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 SERPINC1P01008 464 aa10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 MAPTP10636 758 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 CASP5P51878 434 aa10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 SMTNP53814 917 aa10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 PMS1P54277 932 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 CHMP4BP1P59074 171 aa10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 IGBP1P78318 339 aa10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 FANCCQ00597 558 aa10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 TARBP2Q15633 366 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 ZC2HC1CQ53FD0 456 aaPredicted RBP10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 ZNF484Q5JVG2 852 aa10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 CENPPQ6IPU0 288 aa10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 TTI2Q6NXR4 508 aa10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 EPM2AIP1Q7L775 607 aaPredicted RBP10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 ZNF720Q7Z2F6 126 aa10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 CREBRFQ8IUR6 639 aa10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 EXOC8Q8IYI6 725 aa10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 CSGALNACT2Q8N6G5 542 aa10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 ZNF507Q8TCN5 953 aa10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 NOC3LQ8WTT2 800 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 TMEM143Q96AN5 459 aa10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 JPH2Q9BR39 696 aaPredicted RBP10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 C16orf70Q9BSU1 422 aa10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 SRRTQ9BXP5 876 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 RNPEPQ9H4A4 650 aa10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 TUT1Q9H6E5 874 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 DHX33Q9H6R0 707 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 XPNPEP1Q9NQW7 623 aa10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 PDLIM7Q9NR12 457 aa10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 Q9Y3F1 56 aa10.65□□□□□ -0.7
HNRNPC-220ENST00000555585 UBE4BO95155 1302 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 A6NJR5 290 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 EIF3DO15371 548 aaKnown RBP eCLIP10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 SLC16A4O15374 487 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 SEPT4O43236 478 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 CALUO43852 315 aaPredicted RBP10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 FGFR1OPO95684 399 aaKnown RBP10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 HMGCRP04035 888 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 RARBP10826 455 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 HOXD8P13378 290 aaPredicted RBP10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 ATP1A3P13637 1013 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 INSRRP14616 1297 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 ZNF75DP51815 510 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 PRMT2P55345 433 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 C1QTNF8P60827 252 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 BEX3Q00994 111 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 LRRC63Q05C16 580 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 CCDC173Q0VFZ6 552 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 DMP1Q13316 513 aaPredicted RBP10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 ALCAMQ13740 583 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 KNOP1Q1ED39 458 aaKnown RBP10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 SARM1Q6SZW1 724 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 KSR1Q8IVT5 923 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 SYCP3Q8IZU3 236 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 SLC17A8Q8NDX2 589 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 ANKRD20A12PQ8NF67 263 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 TRAPPC12Q8WVT3 735 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 TCP11Q8WWU5 503 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 FIZ1Q96SL8 496 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 CEP89Q96ST8 783 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 DUSP9Q99956 384 aaKnown RBP10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 HSD3B7Q9H2F3 369 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 THAP9Q9H5L6 903 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 SUGCTQ9HAC7 445 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 C17orf75Q9HAS0 396 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 SPC25Q9HBM1 224 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 KMT5AQ9NQR1 393 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 IFNKQ9P0W0 207 aa10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 MAGEC2Q9UBF1 373 aaPredicted RBP10.64□□□□□ -0.71
HNRNPC-220ENST00000555585 KCNJ18B7U540 433 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms