RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 GATMP50440 423 aa15.29■□□□□ 0.04
SNX6-203ENST00000555416 ERVK-21P61565 698 aa15.29■□□□□ 0.04
SNX6-203ENST00000555416 PTGDRQ13258 359 aa15.29■□□□□ 0.04
SNX6-203ENST00000555416 ORC2Q13416 577 aaPredicted RBP15.29■□□□□ 0.04
SNX6-203ENST00000555416 DSC3Q14574 896 aa15.29■□□□□ 0.04
SNX6-203ENST00000555416 ECM1Q16610 540 aa15.29■□□□□ 0.04
SNX6-203ENST00000555416 XKR9Q5GH70 373 aa15.29■□□□□ 0.04
SNX6-203ENST00000555416 LARP1BQ659C4 914 aaKnown RBP15.29■□□□□ 0.04
SNX6-203ENST00000555416 CATSPER3Q86XQ3 398 aa15.29■□□□□ 0.04
SNX6-203ENST00000555416 YME1L1Q96TA2 773 aa15.29■□□□□ 0.04
SNX6-203ENST00000555416 ADAM2Q99965 735 aa15.29■□□□□ 0.04
SNX6-203ENST00000555416 XPNPEP1Q9NQW7 623 aa15.29■□□□□ 0.04
SNX6-203ENST00000555416 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.29■□□□□ 0.04
SNX6-203ENST00000555416 FOXD4L1Q9NU39 408 aa15.29■□□□□ 0.04
SNX6-203ENST00000555416 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.29■□□□□ 0.04
SNX6-203ENST00000555416 COL4A4P53420 1690 aaPredicted RBP15.28■□□□□ 0.04
SNX6-203ENST00000555416 A0A087WZ62 844 aa15.28■□□□□ 0.04
SNX6-203ENST00000555416 H3BQV1 296 aa15.28■□□□□ 0.04
SNX6-203ENST00000555416 DKC1O60832 514 aaKnown RBP eCLIP15.28■□□□□ 0.04
SNX6-203ENST00000555416 IBSPP21815 317 aaPredicted RBP15.28■□□□□ 0.04
SNX6-203ENST00000555416 IGFBP4P22692 258 aa15.28■□□□□ 0.04
SNX6-203ENST00000555416 EIF4BP23588 611 aaKnown RBP15.28■□□□□ 0.04
SNX6-203ENST00000555416 EMC2Q15006 297 aa15.28■□□□□ 0.04
SNX6-203ENST00000555416 RHPN2Q8IUC4 686 aa15.28■□□□□ 0.04
SNX6-203ENST00000555416 NLRP7Q8WX94 980 aa15.28■□□□□ 0.04
SNX6-203ENST00000555416 ZNF689Q96CS4 500 aaPredicted RBP15.28■□□□□ 0.04
SNX6-203ENST00000555416 FDXACB1Q9BRP7 624 aaPredicted RBP15.28■□□□□ 0.04
SNX6-203ENST00000555416 FTHL17Q9BXU8 183 aa15.28■□□□□ 0.04
SNX6-203ENST00000555416 PP2D1A8MPX8 630 aa15.27■□□□□ 0.04
SNX6-203ENST00000555416 C9IYK1 514 aa15.27■□□□□ 0.04
SNX6-203ENST00000555416 GPR182O15218 404 aa15.27■□□□□ 0.04
SNX6-203ENST00000555416 DGKIO75912 1065 aa15.27■□□□□ 0.04
SNX6-203ENST00000555416 FXR2P51116 673 aaKnown RBP eCLIP15.27■□□□□ 0.04
SNX6-203ENST00000555416 POLGP54098 1239 aaPredicted RBP15.27■□□□□ 0.04
SNX6-203ENST00000555416 GRB10Q13322 594 aa15.27■□□□□ 0.04
SNX6-203ENST00000555416 POTEGQ6S5H5 508 aa15.27■□□□□ 0.04
SNX6-203ENST00000555416 OTUD6AQ7L8S5 288 aa15.27■□□□□ 0.04
SNX6-203ENST00000555416 NEK9Q8TD19 979 aa15.27■□□□□ 0.04
SNX6-203ENST00000555416 GDPD5Q8WTR4 605 aa15.27■□□□□ 0.04
SNX6-203ENST00000555416 PRPF31Q8WWY3 499 aaKnown RBP15.27■□□□□ 0.04
SNX6-203ENST00000555416 NLRP4Q96MN2 994 aa15.27■□□□□ 0.04
SNX6-203ENST00000555416 SCLT1Q96NL6 688 aa15.27■□□□□ 0.04
SNX6-203ENST00000555416 TGS1Q96RS0 853 aaKnown RBP15.27■□□□□ 0.04
SNX6-203ENST00000555416 GAS2L1Q99501 681 aaPredicted RBP15.27■□□□□ 0.04
SNX6-203ENST00000555416 IFT122Q9HBG6 1241 aa15.27■□□□□ 0.04
SNX6-203ENST00000555416 PRDM6Q9NQX0 595 aa15.27■□□□□ 0.04
SNX6-203ENST00000555416 RGS18Q9NS28 235 aa15.27■□□□□ 0.04
SNX6-203ENST00000555416 UNC80Q8N2C7 3258 aa15.26■□□□□ 0.03
SNX6-203ENST00000555416 CDC25AP30304 524 aa15.26■□□□□ 0.03
SNX6-203ENST00000555416 RFC5P40937 340 aa15.26■□□□□ 0.03
SNX6-203ENST00000555416 RARRES1P49788 294 aa15.26■□□□□ 0.03
SNX6-203ENST00000555416 DNM2P50570 870 aa15.26■□□□□ 0.03
SNX6-203ENST00000555416 LAMTOR4Q0VGL1 99 aa15.26■□□□□ 0.03
SNX6-203ENST00000555416 CCDC85BQ15834 202 aaPredicted RBP15.26■□□□□ 0.03
SNX6-203ENST00000555416 FERMT3Q86UX7 667 aa15.26■□□□□ 0.03
SNX6-203ENST00000555416 NPAS4Q8IUM7 802 aa15.26■□□□□ 0.03
SNX6-203ENST00000555416 SLC7A3Q8WY07 619 aa15.26■□□□□ 0.03
SNX6-203ENST00000555416 PPM1EQ8WY54 764 aa15.26■□□□□ 0.03
SNX6-203ENST00000555416 POLR3CQ9BUI4 534 aaPredicted RBP15.26■□□□□ 0.03
SNX6-203ENST00000555416 MINDY3Q9H8M7 445 aa15.26■□□□□ 0.03
SNX6-203ENST00000555416 TUFT1Q9NNX1 390 aa15.26■□□□□ 0.03
SNX6-203ENST00000555416 ANKEF1Q9NU02 776 aa15.26■□□□□ 0.03
SNX6-203ENST00000555416 COL4A3BPQ9Y5P4 624 aa15.26■□□□□ 0.03
SNX6-203ENST00000555416 MTCH2Q9Y6C9 303 aa15.26■□□□□ 0.03
SNX6-203ENST00000555416 PRRC2BQ5JSZ5 2229 aaKnown RBP15.26■□□□□ 0.03
SNX6-203ENST00000555416 ADGRA3Q8IWK6 1321 aa15.25■□□□□ 0.03
SNX6-203ENST00000555416 A0A0C4DFX4 3053 aa15.25■□□□□ 0.03
SNX6-203ENST00000555416 DENND3A2RUS2 1198 aa15.25■□□□□ 0.03
SNX6-203ENST00000555416 K7ELQ4 463 aaPredicted RBP15.25■□□□□ 0.03
SNX6-203ENST00000555416 RPA1P27694 616 aa15.25■□□□□ 0.03
SNX6-203ENST00000555416 SARSP49591 514 aaKnown RBP15.25■□□□□ 0.03
SNX6-203ENST00000555416 FAM189BP81408 668 aa15.25■□□□□ 0.03
SNX6-203ENST00000555416 PAN2Q504Q3 1202 aaKnown RBP15.25■□□□□ 0.03
SNX6-203ENST00000555416 RILPL1Q5EBL4 403 aa15.25■□□□□ 0.03
SNX6-203ENST00000555416 IGSF22Q8N9C0 903 aa15.25■□□□□ 0.03
SNX6-203ENST00000555416 ASAP3Q8TDY4 903 aa15.25■□□□□ 0.03
SNX6-203ENST00000555416 MMTAG2Q9BU76 263 aaKnown RBP15.25■□□□□ 0.03
SNX6-203ENST00000555416 GCOM2Q9BZD3 368 aaPredicted RBP15.25■□□□□ 0.03
SNX6-203ENST00000555416 RNF19AQ9NV58 838 aa15.25■□□□□ 0.03
SNX6-203ENST00000555416 HCSTQ9UBK5 93 aa15.25■□□□□ 0.03
SNX6-203ENST00000555416 VPS37CA5D8V6 355 aaPredicted RBP15.24■□□□□ 0.03
SNX6-203ENST00000555416 USO1O60763 962 aaKnown RBP15.24■□□□□ 0.03
SNX6-203ENST00000555416 SRGAP2CP0DJJ0 459 aa15.24■□□□□ 0.03
SNX6-203ENST00000555416 FGFR1P11362 822 aa15.24■□□□□ 0.03
SNX6-203ENST00000555416 ATP2C1P98194 919 aaPredicted RBP15.24■□□□□ 0.03
SNX6-203ENST00000555416 EPC2Q52LR7 807 aa15.24■□□□□ 0.03
SNX6-203ENST00000555416 FAM102BQ5T8I3 360 aa15.24■□□□□ 0.03
SNX6-203ENST00000555416 SLC24A5Q71RS6 500 aa15.24■□□□□ 0.03
SNX6-203ENST00000555416 ZNF410Q86VK4 478 aa15.24■□□□□ 0.03
SNX6-203ENST00000555416 ZNF710Q8N1W2 664 aa15.24■□□□□ 0.03
SNX6-203ENST00000555416 MICALL1Q8N3F8 863 aa15.24■□□□□ 0.03
SNX6-203ENST00000555416 PSPC1Q8WXF1 523 aaKnown RBP15.24■□□□□ 0.03
SNX6-203ENST00000555416 SNX21Q969T3 373 aa15.24■□□□□ 0.03
SNX6-203ENST00000555416 MTRQ99707 1265 aa15.24■□□□□ 0.03
SNX6-203ENST00000555416 JPH2Q9BR39 696 aaPredicted RBP15.24■□□□□ 0.03
SNX6-203ENST00000555416 GPRC5CQ9NQ84 441 aa15.24■□□□□ 0.03
SNX6-203ENST00000555416 LRWD1Q9UFC0 647 aa15.24■□□□□ 0.03
SNX6-203ENST00000555416 PPME1Q9Y570 386 aa15.24■□□□□ 0.03
SNX6-203ENST00000555416 MRPL42Q9Y6G3 142 aaKnown RBP15.24■□□□□ 0.03
SNX6-203ENST00000555416 NLRC5Q86WI3 1866 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms