RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 IQCKQ8N0W5 287 aa25.88■■□□□ 1.73
STRN3-207ENST00000555358 AIPL1Q9NZN9 384 aa25.88■■□□□ 1.73
STRN3-207ENST00000555358 ADAMTS5Q9UNA0 930 aa25.88■■□□□ 1.73
STRN3-207ENST00000555358 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.88■■□□□ 1.73
STRN3-207ENST00000555358 KDM3AQ9Y4C1 1321 aa25.88■■□□□ 1.73
STRN3-207ENST00000555358 CLSTN1O94985 981 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 FDX1P10109 184 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 ARP10275 920 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 CATSPER3Q86XQ3 398 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 NELFCDQ8IXH7 590 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 BCAS4Q8TDM0 211 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 SCFD1Q8WVM8 642 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 NT5C3AQ9H0P0 336 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 GANQ9H2C0 597 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 ELP3Q9H9T3 547 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 EFCC1Q9HA90 598 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 EPB41L5Q9HCM4 733 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 RPTORQ8N122 1335 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 ESYT3A0FGR9 886 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 POTEFA5A3E0 1075 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 EML1O00423 815 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 POTEIP0CG38 1075 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 TMEM132BQ14DG7 1078 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 TTC31Q49AM3 519 aaPredicted RBP25.87■■□□□ 1.73
STRN3-207ENST00000555358 SH3D19Q5HYK7 790 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 TREML2Q5T2D2 321 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 POTEGQ6S5H5 508 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 POTEEQ6S8J3 1075 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 MREGQ8N565 214 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 TAAR1Q96RJ0 339 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 PACSIN1Q9BY11 444 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 RNF146Q9NTX7 359 aa25.87■■□□□ 1.73
STRN3-207ENST00000555358 ZNF214Q9UL59 606 aaPredicted RBP25.87■■□□□ 1.73
STRN3-207ENST00000555358 CPP00450 1065 aa25.86■■□□□ 1.73
STRN3-207ENST00000555358 SSBP05455 408 aaKnown RBP eCLIP25.86■■□□□ 1.73
STRN3-207ENST00000555358 IREB2P48200 963 aaKnown RBP25.86■■□□□ 1.73
STRN3-207ENST00000555358 GUCY2DQ02846 1103 aa25.86■■□□□ 1.73
STRN3-207ENST00000555358 PAK2Q13177 524 aa25.86■■□□□ 1.73
STRN3-207ENST00000555358 RAPGEF1Q13905 1077 aa25.86■■□□□ 1.73
STRN3-207ENST00000555358 SNRNP48Q6IEG0 339 aaKnown RBP25.86■■□□□ 1.73
STRN3-207ENST00000555358 NSMFQ6X4W1 530 aa25.86■■□□□ 1.73
STRN3-207ENST00000555358 BMP2KQ9NSY1 1161 aaPredicted RBP25.86■■□□□ 1.73
STRN3-207ENST00000555358 NPHP3-ACAD11A0A0J9YXS1 232 aa25.86■■□□□ 1.73
STRN3-207ENST00000555358 MEIS1O00470 390 aa25.86■■□□□ 1.73
STRN3-207ENST00000555358 SPATA31C1P0DKV0 1188 aa25.86■■□□□ 1.73
STRN3-207ENST00000555358 DNA2P51530 1060 aa25.86■■□□□ 1.73
STRN3-207ENST00000555358 CCDC65Q8IXS2 484 aa25.86■■□□□ 1.73
STRN3-207ENST00000555358 ZC3H15Q8WU90 426 aaKnown RBP25.86■■□□□ 1.73
STRN3-207ENST00000555358 PIK3R5Q8WYR1 880 aa25.86■■□□□ 1.73
STRN3-207ENST00000555358 TAF1DQ9H5J8 278 aaPredicted RBP25.86■■□□□ 1.73
STRN3-207ENST00000555358 PACSIN2Q9UNF0 486 aaPredicted RBP25.86■■□□□ 1.73
STRN3-207ENST00000555358 KRT14P02533 472 aa25.85■■□□□ 1.73
STRN3-207ENST00000555358 PLA2G4BP0C869 781 aa25.85■■□□□ 1.73
STRN3-207ENST00000555358 ITGB5P18084 799 aa25.85■■□□□ 1.73
STRN3-207ENST00000555358 LRCH2Q5VUJ6 765 aa25.85■■□□□ 1.73
STRN3-207ENST00000555358 FAM133AQ8N9E0 248 aa25.85■■□□□ 1.73
STRN3-207ENST00000555358 RBM46Q8TBY0 533 aaKnown RBP25.85■■□□□ 1.73
STRN3-207ENST00000555358 CASKIN2Q8WXE0 1202 aa25.85■■□□□ 1.73
STRN3-207ENST00000555358 SLC5A5Q92911 643 aa25.85■■□□□ 1.73
STRN3-207ENST00000555358 CCDC43Q96MW1 224 aaKnown RBP25.85■■□□□ 1.73
STRN3-207ENST00000555358 FAM107BQ9H098 131 aa25.85■■□□□ 1.73
STRN3-207ENST00000555358 A0A087WUV0 522 aaPredicted RBP25.84■■□□□ 1.73
STRN3-207ENST00000555358 ZNF233A6NK53 670 aa25.84■■□□□ 1.73
STRN3-207ENST00000555358 SPDYE16A6NNV3 312 aaPredicted RBP25.84■■□□□ 1.73
STRN3-207ENST00000555358 PSMD10O75832 226 aa25.84■■□□□ 1.73
STRN3-207ENST00000555358 CACNB1Q02641 598 aaPredicted RBP25.84■■□□□ 1.73
STRN3-207ENST00000555358 KLHL30Q0D2K2 578 aa25.84■■□□□ 1.73
STRN3-207ENST00000555358 TTLL12Q14166 644 aaPredicted RBP25.84■■□□□ 1.73
STRN3-207ENST00000555358 KIAA0753Q2KHM9 967 aa25.84■■□□□ 1.73
STRN3-207ENST00000555358 TTC19Q6DKK2 380 aaPredicted RBP25.84■■□□□ 1.73
STRN3-207ENST00000555358 RNF207Q6ZRF8 634 aa25.84■■□□□ 1.73
STRN3-207ENST00000555358 OTOP1Q7RTM1 612 aa25.84■■□□□ 1.73
STRN3-207ENST00000555358 TADA2BQ86TJ2 420 aa25.84■■□□□ 1.73
STRN3-207ENST00000555358 KRT12Q99456 494 aa25.84■■□□□ 1.73
STRN3-207ENST00000555358 MXRA8Q9BRK3 442 aa25.84■■□□□ 1.73
STRN3-207ENST00000555358 ADAMTS1Q9UHI8 967 aa25.84■■□□□ 1.73
STRN3-207ENST00000555358 SCN4AP35499 1836 aa25.84■■□□□ 1.73
STRN3-207ENST00000555358 EBAG9O00559 213 aa25.84■■□□□ 1.73
STRN3-207ENST00000555358 IRF6O14896 467 aa25.84■■□□□ 1.73
STRN3-207ENST00000555358 CYP11B2P19099 503 aa25.84■■□□□ 1.73
STRN3-207ENST00000555358 PSMC6P62333 389 aa25.84■■□□□ 1.73
STRN3-207ENST00000555358 CYP4A11Q02928 519 aa25.84■■□□□ 1.73
STRN3-207ENST00000555358 ARID5AQ03989 594 aa25.84■■□□□ 1.73
STRN3-207ENST00000555358 DPY19L2P1Q6NXN4 242 aa25.84■■□□□ 1.73
STRN3-207ENST00000555358 SH2D3CQ8N5H7 860 aa25.84■■□□□ 1.73
STRN3-207ENST00000555358 IFT81Q8WYA0 676 aa25.84■■□□□ 1.73
STRN3-207ENST00000555358 OTUD5Q96G74 571 aa25.84■■□□□ 1.73
STRN3-207ENST00000555358 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.84■■□□□ 1.73
STRN3-207ENST00000555358 FRMD3A2A2Y4 597 aa25.83■■□□□ 1.73
STRN3-207ENST00000555358 CHMP2AO43633 222 aa25.83■■□□□ 1.73
STRN3-207ENST00000555358 EIF2AK2P19525 551 aaKnown RBP25.83■■□□□ 1.73
STRN3-207ENST00000555358 ASIC2Q16515 512 aa25.83■■□□□ 1.73
STRN3-207ENST00000555358 HERC4Q5GLZ8 1057 aaPredicted RBP25.83■■□□□ 1.73
STRN3-207ENST00000555358 GPBP1Q86WP2 473 aa25.83■■□□□ 1.73
STRN3-207ENST00000555358 RABEP2Q9H5N1 569 aa25.83■■□□□ 1.73
STRN3-207ENST00000555358 TMEM59LQ9UK28 342 aa25.83■■□□□ 1.73
STRN3-207ENST00000555358 BTNL10A8MVZ5 291 aa25.83■■□□□ 1.72
STRN3-207ENST00000555358 PEX10O60683 326 aa25.83■■□□□ 1.72
STRN3-207ENST00000555358 MYBP10242 640 aa25.83■■□□□ 1.72
STRN3-207ENST00000555358 RPA1P27694 616 aa25.83■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms