RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 ST14Q9Y5Y6 855 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 SSC5DA1L4H1 1573 aa5.07□□□□□ -1.6
CPSF2-204ENST00000555244 LAMB1P07942 1786 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 A0A1B0GUL7 405 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 A0A1W2PQU0 124 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 UBE2Q2LH0YL09 131 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 H3BS24 57 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 USP2O75604 605 aaPredicted RBP5.06□□□□□ -1.6
CPSF2-204ENST00000555244 ITGAVP06756 1048 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 ZBTB48P10074 688 aaPredicted RBP5.06□□□□□ -1.6
CPSF2-204ENST00000555244 TPP2P29144 1249 aaPredicted RBP5.06□□□□□ -1.6
CPSF2-204ENST00000555244 PHKA1P46020 1223 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 NOP2P46087 812 aaKnown RBP5.06□□□□□ -1.6
CPSF2-204ENST00000555244 LBX1P52954 281 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 TIMM10P62072 90 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 KIF23Q02241 960 aaPredicted RBP5.06□□□□□ -1.6
CPSF2-204ENST00000555244 TFCP2Q12800 502 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 GRB10Q13322 594 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 PPP2R5DQ14738 602 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 MVPQ14764 893 aaKnown RBP5.06□□□□□ -1.6
CPSF2-204ENST00000555244 C2orf27AQ580R0 203 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 SDE2Q6IQ49 451 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 CEP85Q6P2H3 762 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 TSPYL5Q86VY4 417 aaPredicted RBP5.06□□□□□ -1.6
CPSF2-204ENST00000555244 PLD6Q8N2A8 252 aaKnown RBP5.06□□□□□ -1.6
CPSF2-204ENST00000555244 LILRB2Q8N423 598 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 ZSWIM2Q8NEG5 633 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 UBE2FQ969M7 185 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 TEKT1Q969V4 418 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 MISP3Q96FF7 219 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 RNPC3Q96LT9 517 aaKnown RBP5.06□□□□□ -1.6
CPSF2-204ENST00000555244 AARSD1Q9BTE6 412 aaKnown RBP5.06□□□□□ -1.6
CPSF2-204ENST00000555244 IDI2Q9BXS1 227 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 SIL1Q9H173 461 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 TDRD3Q9H7E2 651 aaKnown RBP5.06□□□□□ -1.6
CPSF2-204ENST00000555244 ZBTB40Q9NUA8 1239 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 ZC3H7BQ9UGR2 993 aaKnown RBP5.06□□□□□ -1.6
CPSF2-204ENST00000555244 ZNF112Q9UJU3 913 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 PLAGL2Q9UPG8 496 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 EMC9Q9Y3B6 208 aa5.06□□□□□ -1.6
CPSF2-204ENST00000555244 MRPL42Q9Y6G3 142 aaKnown RBP5.06□□□□□ -1.6
CPSF2-204ENST00000555244 RFX7Q2KHR2 1363 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 GPR75-ASB3A0A0A6YYF3 556 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 TRAV20A0A0B4J274 112 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 CCDC163A0A0D9SF12 145 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 SHISA3A0PJX4 238 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 F8W031 263 aaPredicted RBP5.05□□□□□ -1.6
CPSF2-204ENST00000555244 MEIS1O00470 390 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 FRAT2O75474 233 aaPredicted RBP5.05□□□□□ -1.6
CPSF2-204ENST00000555244 KCNH1O95259 989 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 UQCRFS1P1P0C7P4 283 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 ENDOUP21128 410 aaKnown RBP5.05□□□□□ -1.6
CPSF2-204ENST00000555244 PRDX5P30044 214 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 ADORA1P30542 326 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 PCBP3P57721 371 aaKnown RBP5.05□□□□□ -1.6
CPSF2-204ENST00000555244 PPP2R2AP63151 447 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 AMPD2Q01433 879 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 PRKCQQ04759 706 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 G3BP1Q13283 466 aaKnown RBP eCLIP5.05□□□□□ -1.65e-6■□□□□ 11
CPSF2-204ENST00000555244 PRAMEF18Q5VWM3 479 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 SPTY2D1Q68D10 685 aaPredicted RBP5.05□□□□□ -1.6
CPSF2-204ENST00000555244 MOB2Q70IA6 237 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 TMPRSS7Q7RTY8 843 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 JAZF1Q86VZ6 243 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 ZNF227Q86WZ6 799 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 HOMER1Q86YM7 354 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 TRIM59Q8IWR1 403 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 RPAP2Q8IXW5 612 aaPredicted RBP5.05□□□□□ -1.6
CPSF2-204ENST00000555244 FTSJ3Q8IY81 847 aaKnown RBP5.05□□□□□ -1.6
CPSF2-204ENST00000555244 ANKRD13AQ8IZ07 590 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 STK11IPQ8N1F8 1099 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 ZNF513Q8N8E2 541 aaPredicted RBP5.05□□□□□ -1.6
CPSF2-204ENST00000555244 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.05□□□□□ -1.6
CPSF2-204ENST00000555244 ZNF384Q8TF68 577 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 FAM151AQ8WW52 585 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 APPBP2Q92624 585 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 HOOK2Q96ED9 719 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 TCTN2Q96GX1 697 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 CCDC140Q96MF4 163 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 CDC6Q99741 560 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 CHMP4BQ9H444 224 aaKnown RBP5.05□□□□□ -1.6
CPSF2-204ENST00000555244 RNF186Q9NXI6 227 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 HMG20BQ9P0W2 317 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 RCAN3Q9UKA8 241 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 VAV3Q9UKW4 847 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 DDX19BQ9UMR2 479 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 JAG2Q9Y219 1238 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 RNF114Q9Y508 228 aa5.05□□□□□ -1.6
CPSF2-204ENST00000555244 ATRNL1Q5VV63 1379 aa5.04□□□□□ -1.6
CPSF2-204ENST00000555244 HTTP42858 3142 aa5.04□□□□□ -1.6
CPSF2-204ENST00000555244 CLRN2A0PK11 232 aa5.04□□□□□ -1.6
CPSF2-204ENST00000555244 MANSC4A6NHS7 340 aaPredicted RBP5.04□□□□□ -1.6
CPSF2-204ENST00000555244 ENTPD3O75355 529 aa5.04□□□□□ -1.6
CPSF2-204ENST00000555244 HOXC12P31275 282 aa5.04□□□□□ -1.6
CPSF2-204ENST00000555244 BMP8BP34820 402 aa5.04□□□□□ -1.6
CPSF2-204ENST00000555244 RHBDL3P58872 404 aa5.04□□□□□ -1.6
CPSF2-204ENST00000555244 SREBF2Q12772 1141 aa5.04□□□□□ -1.6
CPSF2-204ENST00000555244 CHAF1AQ13111 956 aaPredicted RBP5.04□□□□□ -1.6
CPSF2-204ENST00000555244 HSP90AB4PQ58FF6 505 aa5.04□□□□□ -1.6
CPSF2-204ENST00000555244 TMEM67Q5HYA8 995 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms