RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 SSBP05455 408 aaKnown RBP eCLIP12.11□□□□□ -0.47
SHMT2-218ENST00000555213 SLFN14P0C7P3 912 aa12.11□□□□□ -0.47
SHMT2-218ENST00000555213 RSPH10BP0C881 870 aa12.11□□□□□ -0.47
SHMT2-218ENST00000555213 PLCG1P19174 1290 aa12.11□□□□□ -0.47
SHMT2-218ENST00000555213 CYP2C18P33260 490 aa12.11□□□□□ -0.47
SHMT2-218ENST00000555213 STAT6P42226 847 aa12.11□□□□□ -0.47
SHMT2-218ENST00000555213 SARSP49591 514 aaKnown RBP12.11□□□□□ -0.47
SHMT2-218ENST00000555213 CLCN3P51790 818 aa12.11□□□□□ -0.47
SHMT2-218ENST00000555213 MRPS6P82932 125 aaKnown RBP12.11□□□□□ -0.47
SHMT2-218ENST00000555213 CDC42EP1Q00587 391 aa12.11□□□□□ -0.47
SHMT2-218ENST00000555213 GRB10Q13322 594 aa12.11□□□□□ -0.47
SHMT2-218ENST00000555213 PPIGQ13427 754 aaKnown RBP eCLIP12.11□□□□□ -0.474e-10■□□□□ 8.7
SHMT2-218ENST00000555213 KARSQ15046 597 aaKnown RBP12.11□□□□□ -0.47
SHMT2-218ENST00000555213 TRIM71Q2Q1W2 868 aaKnown RBP12.11□□□□□ -0.47
SHMT2-218ENST00000555213 TMEM119Q4V9L6 283 aa12.11□□□□□ -0.47
SHMT2-218ENST00000555213 PADI6Q6TGC4 694 aa12.11□□□□□ -0.47
SHMT2-218ENST00000555213 LRRC71Q8N4P6 559 aa12.11□□□□□ -0.47
SHMT2-218ENST00000555213 PDILTQ8N807 584 aa12.11□□□□□ -0.47
SHMT2-218ENST00000555213 PSPC1Q8WXF1 523 aaKnown RBP12.11□□□□□ -0.47
SHMT2-218ENST00000555213 ZBTB10Q96DT7 871 aa12.11□□□□□ -0.47
SHMT2-218ENST00000555213 PAGE5Q96GU1 130 aa12.11□□□□□ -0.47
SHMT2-218ENST00000555213 SH2D3AQ9BRG2 576 aa12.11□□□□□ -0.47
SHMT2-218ENST00000555213 RBSNQ9H1K0 784 aa12.11□□□□□ -0.47
SHMT2-218ENST00000555213 DHX33Q9H6R0 707 aaKnown RBP12.11□□□□□ -0.47
SHMT2-218ENST00000555213 STK17AQ9UEE5 414 aa12.11□□□□□ -0.47
SHMT2-218ENST00000555213 A0A087WWV3 80 aa12.1□□□□□ -0.47
SHMT2-218ENST00000555213 IGKV6-21A0A0C4DH24 114 aa12.1□□□□□ -0.47
SHMT2-218ENST00000555213 E9PMD0 336 aa12.1□□□□□ -0.47
SHMT2-218ENST00000555213 PFKMP08237 780 aa12.1□□□□□ -0.47
SHMT2-218ENST00000555213 IQCF3P0C7M6 154 aa12.1□□□□□ -0.47
SHMT2-218ENST00000555213 CCL23P55773 120 aa12.1□□□□□ -0.47
SHMT2-218ENST00000555213 ZNF618Q5T7W0 954 aa12.1□□□□□ -0.47
SHMT2-218ENST00000555213 RRAGBQ5VZM2 374 aa12.1□□□□□ -0.47
SHMT2-218ENST00000555213 GRAMD1CQ8IYS0 662 aa12.1□□□□□ -0.47
SHMT2-218ENST00000555213 KIAA0319LQ8IZA0 1049 aa12.1□□□□□ -0.47
SHMT2-218ENST00000555213 SPATA20Q8TB22 786 aa12.1□□□□□ -0.47
SHMT2-218ENST00000555213 BADQ92934 168 aa12.1□□□□□ -0.47
SHMT2-218ENST00000555213 WNT8BQ93098 351 aa12.1□□□□□ -0.47
SHMT2-218ENST00000555213 PLIN2Q99541 437 aa12.1□□□□□ -0.47
SHMT2-218ENST00000555213 WNT8AQ9H1J5 351 aa12.1□□□□□ -0.47
SHMT2-218ENST00000555213 BMP2KQ9NSY1 1161 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-218ENST00000555213 KCND2Q9NZV8 630 aa12.1□□□□□ -0.47
SHMT2-218ENST00000555213 KIAA1468Q9P260 1216 aa12.1□□□□□ -0.47
SHMT2-218ENST00000555213 TRPV2Q9Y5S1 764 aa12.1□□□□□ -0.47
SHMT2-218ENST00000555213 UMODL1Q5DID0 1318 aa12.1□□□□□ -0.47
SHMT2-218ENST00000555213 KAT6AQ92794 2004 aa12.1□□□□□ -0.47
SHMT2-218ENST00000555213 TANC1Q9C0D5 1861 aa12.09□□□□□ -0.47
SHMT2-218ENST00000555213 ZBTB39O15060 712 aa12.09□□□□□ -0.47
SHMT2-218ENST00000555213 PRR29P0C7W0 189 aa12.09□□□□□ -0.47
SHMT2-218ENST00000555213 PLA2G4BP0C869 781 aa12.09□□□□□ -0.47
SHMT2-218ENST00000555213 CYP11B2P19099 503 aa12.09□□□□□ -0.47
SHMT2-218ENST00000555213 MAGEA10P43363 369 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-218ENST00000555213 TMEM62Q0P6H9 643 aa12.09□□□□□ -0.47
SHMT2-218ENST00000555213 PNOCQ13519 176 aa12.09□□□□□ -0.47
SHMT2-218ENST00000555213 TFDP1Q14186 410 aa12.09□□□□□ -0.47
SHMT2-218ENST00000555213 MXD4Q14582 209 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-218ENST00000555213 FAM26DQ5JW98 314 aa12.09□□□□□ -0.47
SHMT2-218ENST00000555213 NT5DC1Q5TFE4 455 aa12.09□□□□□ -0.47
SHMT2-218ENST00000555213 PSRC1Q6PGN9 363 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-218ENST00000555213 RPUSD2Q8IZ73 545 aaKnown RBP12.09□□□□□ -0.47
SHMT2-218ENST00000555213 LINC01465Q8N7H1 131 aa12.09□□□□□ -0.47
SHMT2-218ENST00000555213 NLRP7Q8WX94 980 aa12.09□□□□□ -0.47
SHMT2-218ENST00000555213 DHX58Q96C10 678 aa12.09□□□□□ -0.47
SHMT2-218ENST00000555213 CEP89Q96ST8 783 aa12.09□□□□□ -0.47
SHMT2-218ENST00000555213 TIPINQ9BVW5 301 aa12.09□□□□□ -0.47
SHMT2-218ENST00000555213 CUEDC2Q9H467 287 aa12.09□□□□□ -0.47
SHMT2-218ENST00000555213 BLOC1S4Q9NUP1 217 aa12.09□□□□□ -0.47
SHMT2-218ENST00000555213 SUCLA2Q9P2R7 463 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-218ENST00000555213 GINS2Q9Y248 185 aa12.09□□□□□ -0.47
SHMT2-218ENST00000555213 CDY2AQ9Y6F7 541 aa12.09□□□□□ -0.47
SHMT2-218ENST00000555213 WDR81Q562E7 1941 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 LOXHD1Q8IVV2 1947 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 ASAP2O43150 1006 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 VTNP04004 478 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 KRT18P05783 430 aaKnown RBP12.08□□□□□ -0.48
SHMT2-218ENST00000555213 ACTN1P12814 892 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 CSF2RAP15509 400 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 BMP6P22004 513 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 ITGB8P26012 769 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 CASP1P29466 404 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 TYRO3Q06418 890 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 KIZQ2M2Z5 673 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 ODR4Q5SWX8 454 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 FAM102BQ5T8I3 360 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 KCNK18Q7Z418 384 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 ZNF410Q86VK4 478 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 RHPN2Q8IUC4 686 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 IQUBQ8NA54 791 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 USP38Q8NB14 1042 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 CNNM3Q8NE01 707 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 LARP4BQ92615 738 aaKnown RBP12.08□□□□□ -0.48
SHMT2-218ENST00000555213 RAD54LQ92698 747 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 STAMQ92783 540 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 KIFAP3Q92845 792 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 TMEM143Q96AN5 459 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 SCLYQ96I15 445 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 DRC1Q96MC2 740 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 NLRP4Q96MN2 994 aa12.08□□□□□ -0.48
SHMT2-218ENST00000555213 CELF4Q9BZC1 486 aaKnown RBP12.08□□□□□ -0.48
SHMT2-218ENST00000555213 POLR3FQ9H1D9 316 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms