RNA–Protein interactions for RNA: ENST00000555094.5

GABRB3-208, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,494 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-208ENST00000555094 TEX33O43247 280 aa11.96□□□□□ -0.49
GABRB3-208ENST00000555094 LGALS2P05162 132 aa11.96□□□□□ -0.49
GABRB3-208ENST00000555094 TPM3P06753 285 aa11.96□□□□□ -0.49
GABRB3-208ENST00000555094 ZNF865P0CJ78 1059 aaPredicted RBP11.96□□□□□ -0.49
GABRB3-208ENST00000555094 MARK3P27448 753 aa11.96□□□□□ -0.49
GABRB3-208ENST00000555094 PBX1P40424 430 aa11.96□□□□□ -0.49
GABRB3-208ENST00000555094 RFC5P40937 340 aa11.96□□□□□ -0.49
GABRB3-208ENST00000555094 PSMC4P43686 418 aa11.96□□□□□ -0.49
GABRB3-208ENST00000555094 SLC26A2P50443 739 aa11.96□□□□□ -0.49
GABRB3-208ENST00000555094 POLGP54098 1239 aaPredicted RBP11.96□□□□□ -0.49
GABRB3-208ENST00000555094 NCKAP1LP55160 1127 aa11.96□□□□□ -0.49
GABRB3-208ENST00000555094 RTP1P59025 263 aa11.96□□□□□ -0.49
GABRB3-208ENST00000555094 FKBP3Q00688 224 aaKnown RBP11.96□□□□□ -0.49
GABRB3-208ENST00000555094 ALCAMQ13740 583 aa11.96□□□□□ -0.49
GABRB3-208ENST00000555094 PLCB4Q15147 1175 aa11.96□□□□□ -0.49
GABRB3-208ENST00000555094 IQSEC1Q6DN90 963 aa11.96□□□□□ -0.49
GABRB3-208ENST00000555094 STXBP4Q6ZWJ1 553 aa11.96□□□□□ -0.49
GABRB3-208ENST00000555094 ANKRD20A12PQ8NF67 263 aa11.96□□□□□ -0.49
GABRB3-208ENST00000555094 AFG1LQ8WV93 481 aa11.96□□□□□ -0.49
GABRB3-208ENST00000555094 CFHR5Q9BXR6 569 aa11.96□□□□□ -0.49
GABRB3-208ENST00000555094 POLR3FQ9H1D9 316 aaPredicted RBP11.96□□□□□ -0.49
GABRB3-208ENST00000555094 SMARCAD1Q9H4L7 1026 aa11.96□□□□□ -0.49
GABRB3-208ENST00000555094 NRBP2Q9NSY0 501 aa11.96□□□□□ -0.49
GABRB3-208ENST00000555094 MAGEC2Q9UBF1 373 aaPredicted RBP11.96□□□□□ -0.49
GABRB3-208ENST00000555094 PPME1Q9Y570 386 aa11.96□□□□□ -0.49
GABRB3-208ENST00000555094 LGALS16A8MUM7 142 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 PDXKO00764 312 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 TGFB1I1O43294 461 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 FGFR1OPO95684 399 aaKnown RBP11.95□□□□□ -0.5
GABRB3-208ENST00000555094 CYP2C19P33261 490 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 NPTX2P47972 431 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 PEX3P56589 373 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 CAP1Q01518 475 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 NFIL3Q16649 462 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 PTPN21Q16825 1174 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 FILIP1LQ4L180 1135 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 PRAMEF19Q5SWL8 479 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 CCDC186Q7Z3E2 898 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 KSR1Q8IVT5 923 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 OR6J1Q8NGC5 347 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 SPIRE2Q8WWL2 714 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 VPS16Q9H269 839 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 IKZF4Q9H2S9 585 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 C17orf75Q9HAS0 396 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 IMPACTQ9P2X3 320 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 GNEQ9Y223 722 aaKnown RBP11.95□□□□□ -0.5
GABRB3-208ENST00000555094 PCDHB13Q9Y5F0 798 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 ADGRA3Q8IWK6 1321 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 N4BP3O15049 544 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 SLC16A4O15374 487 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 CALUO43852 315 aaPredicted RBP11.95□□□□□ -0.5
GABRB3-208ENST00000555094 NR3C1P04150 777 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 MMP3P08254 477 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 ZNF286BP0CG31 522 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 XRCC5P13010 732 aaKnown RBP11.95□□□□□ -0.5
GABRB3-208ENST00000555094 MTIF2P46199 727 aaKnown RBP11.95□□□□□ -0.5
GABRB3-208ENST00000555094 GTF2BQ00403 316 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 TNFAIP2Q03169 654 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 DMP1Q13316 513 aaPredicted RBP11.95□□□□□ -0.5
GABRB3-208ENST00000555094 MIIPQ5JXC2 388 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 HAUS6Q7Z4H7 955 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 FILIP1Q7Z7B0 1213 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 SLC17A8Q8NDX2 589 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 TMEM161BQ8NDZ6 487 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 ASAP3Q8TDY4 903 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 SLC7A3Q8WY07 619 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 LENG1Q96BZ8 264 aaPredicted RBP11.95□□□□□ -0.5
GABRB3-208ENST00000555094 HVCN1Q96D96 273 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 TUBGCP2Q9BSJ2 902 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 KIFC3Q9BVG8 833 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 KCNF1Q9H3M0 494 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 GABRQQ9UN88 632 aa11.95□□□□□ -0.5
GABRB3-208ENST00000555094 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.95□□□□□ -0.5
GABRB3-208ENST00000555094 MAFO75444 373 aaPredicted RBP11.94□□□□□ -0.5
GABRB3-208ENST00000555094 TBC1D8O95759 1140 aa11.94□□□□□ -0.5
GABRB3-208ENST00000555094 NR2F2P24468 414 aa11.94□□□□□ -0.5
GABRB3-208ENST00000555094 ARL2P36404 184 aa11.94□□□□□ -0.5
GABRB3-208ENST00000555094 VEGFBP49765 207 aa11.94□□□□□ -0.5
GABRB3-208ENST00000555094 MARSP56192 900 aaKnown RBP11.94□□□□□ -0.5
GABRB3-208ENST00000555094 TBX2Q13207 712 aaPredicted RBP11.94□□□□□ -0.5
GABRB3-208ENST00000555094 SPECC1LQ69YQ0 1117 aa11.94□□□□□ -0.5
GABRB3-208ENST00000555094 TRPV1Q8NER1 839 aa11.94□□□□□ -0.5
GABRB3-208ENST00000555094 TMEM143Q96AN5 459 aa11.94□□□□□ -0.5
GABRB3-208ENST00000555094 ACCSQ96QU6 501 aa11.94□□□□□ -0.5
GABRB3-208ENST00000555094 C16orf70Q9BSU1 422 aa11.94□□□□□ -0.5
GABRB3-208ENST00000555094 KMT5AQ9NQR1 393 aa11.94□□□□□ -0.5
GABRB3-208ENST00000555094 AGPAT3Q9NRZ7 376 aa11.94□□□□□ -0.5
GABRB3-208ENST00000555094 ERAP1Q9NZ08 941 aa11.94□□□□□ -0.5
GABRB3-208ENST00000555094 TRPC6Q9Y210 931 aa11.94□□□□□ -0.5
GABRB3-208ENST00000555094 ITIH6Q6UXX5 1313 aa11.94□□□□□ -0.5
GABRB3-208ENST00000555094 EVPLQ92817 2033 aa11.93□□□□□ -0.5
GABRB3-208ENST00000555094 IGKV6-21A0A0C4DH24 114 aa11.93□□□□□ -0.5
GABRB3-208ENST00000555094 CCDC169A6NNP5 214 aa11.93□□□□□ -0.5
GABRB3-208ENST00000555094 CETN3O15182 167 aa11.93□□□□□ -0.5
GABRB3-208ENST00000555094 SLC16A3O15427 465 aaKnown RBP11.93□□□□□ -0.5
GABRB3-208ENST00000555094 HBP1O60381 514 aa11.93□□□□□ -0.5
GABRB3-208ENST00000555094 GLRA2P23416 452 aa11.93□□□□□ -0.5
GABRB3-208ENST00000555094 MAP2K2P36507 400 aa11.93□□□□□ -0.5
GABRB3-208ENST00000555094 GSDMDP57764 484 aa11.93□□□□□ -0.5
GABRB3-208ENST00000555094 PRKCZQ05513 592 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms