RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 MAD2L2Q9UI95 211 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 KCNJ6P48051 423 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 DR1Q01658 176 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 BTNL9Q6UXG8 535 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 PCDHGB4Q9UN71 923 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 TRIM33Q9UPN9 1127 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 IRF1P10914 325 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 CHRNA3P32297 505 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 NCALDP61601 193 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 FGD2Q7Z6J4 655 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 ARL8AQ96BM9 186 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 CENPTQ96BT3 561 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 MAGEB5Q9BZ81 275 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 ZMYND12Q9H0C1 365 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 C19orf44Q9H6X5 657 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 ZFP69BQ9UJL9 534 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 AURKCQ9UQB9 309 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 ADORA1P30542 326 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 ARL4CP56559 192 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 MFSD14CQ5VZR4 134 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 NUDT18Q6ZVK8 323 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 C2orf69Q8N8R5 385 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 FANCBQ8NB91 859 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 BCL2L14Q9BZR8 327 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 NDEL1Q9GZM8 345 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 DONSONQ9NYP3 566 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 APOBEC2Q9Y235 224 aaKnown RBP7.33□□□□□ -1.24
SYNE2-216ENST00000555002 YEATS2Q9ULM3 1422 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 AOX1Q06278 1338 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 PDIK1LQ8N165 341 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 USP6NLQ92738 828 aa7.33□□□□□ -1.24
SYNE2-216ENST00000555002 CNOT10Q9H9A5 744 aaKnown RBP7.33□□□□□ -1.24
SYNE2-216ENST00000555002 SRGAP2O75044 1071 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 TCP1P17987 556 aaKnown RBP7.32□□□□□ -1.24
SYNE2-216ENST00000555002 SOAT1P35610 550 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 PHKA2P46019 1235 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 MDM2Q00987 491 aaPredicted RBP7.32□□□□□ -1.24
SYNE2-216ENST00000555002 MYRIPQ8NFW9 859 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 EYA1Q99502 592 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 A0A1B0GW55 424 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 SERPINB2P05120 415 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 DUX4L2P0CJ85 424 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 DUX4L3P0CJ86 424 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 DUX4L4P0CJ87 422 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 DUX4L5P0CJ88 424 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 DUX4L6P0CJ89 424 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 DUX4L7P0CJ90 424 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 SLC7A5Q01650 507 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 PPP2R5BQ15173 497 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 SYT2Q8N9I0 419 aaPredicted RBP7.32□□□□□ -1.24
SYNE2-216ENST00000555002 FLCNQ8NFG4 579 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 DEPDC7Q96QD5 511 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 TUBGCP2Q9BSJ2 902 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 TRIM54Q9BYV2 358 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 DUX4Q9UBX2 424 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 URB2Q14146 1524 aaKnown RBP7.32□□□□□ -1.24
SYNE2-216ENST00000555002 FAM47E-STBD1D6RA91 191 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 APOA1P02647 267 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 GCP02774 474 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 ASPRV1Q53RT3 343 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 FAM117BQ6P1L5 589 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 IYDQ6PHW0 289 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 RFX8Q6ZV50 586 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 ENAHQ8N8S7 591 aaPredicted RBP7.32□□□□□ -1.24
SYNE2-216ENST00000555002 LARP4BQ92615 738 aaKnown RBP7.32□□□□□ -1.24
SYNE2-216ENST00000555002 EDC3Q96F86 508 aaKnown RBP7.32□□□□□ -1.24
SYNE2-216ENST00000555002 FOPNLQ96NB1 174 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 C17orf80Q9BSJ5 609 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 ARHGEF3Q9NR81 526 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 HSPBP1Q9NZL4 362 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 ATP11BQ9Y2G3 1177 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 RASSF10A6NK89 507 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 HNRNPCP07910 306 aaKnown RBP eCLIP7.32□□□□□ -1.24
SYNE2-216ENST00000555002 ARHGAP17Q68EM7 881 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 TRIM69Q86WT6 500 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 GRAMD1CQ8IYS0 662 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 SIK2Q9H0K1 926 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 CSE1LP55060 971 aaKnown RBP7.32□□□□□ -1.24
SYNE2-216ENST00000555002 SHROOM1Q2M3G4 852 aaPredicted RBP7.32□□□□□ -1.24
SYNE2-216ENST00000555002 MCTP2Q6DN12 878 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 RAET1EQ8TD07 263 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 OPTNQ96CV9 577 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 DARSP14868 501 aaKnown RBP7.32□□□□□ -1.24
SYNE2-216ENST00000555002 CPB1P15086 417 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 DDX5P17844 614 aaKnown RBP7.32□□□□□ -1.24
SYNE2-216ENST00000555002 PIK3R2O00459 728 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 MAPK13O15264 365 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 PRAMEP78395 509 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 ZNF667Q5HYK9 610 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 FLAD1Q8NFF5 587 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 CYP4F11Q9HBI6 524 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 FAM32AQ9Y421 112 aaKnown RBP7.32□□□□□ -1.24
SYNE2-216ENST00000555002 KDM5AP29375 1690 aaKnown RBP7.32□□□□□ -1.24
SYNE2-216ENST00000555002 SKAP2O75563 359 aaPredicted RBP7.32□□□□□ -1.24
SYNE2-216ENST00000555002 EIF4A3P38919 411 aaKnown RBP7.32□□□□□ -1.24
SYNE2-216ENST00000555002 KIZQ2M2Z5 673 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 RCSD1Q6JBY9 416 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 DCTPP1Q9H773 170 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 BABAM1Q9NWV8 329 aa7.32□□□□□ -1.24
SYNE2-216ENST00000555002 TTC7AQ9ULT0 858 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms