RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 CNTNAP5Q8WYK1 1306 aa12.31□□□□□ -0.44
SRP54-205ENST00000554803 ZNF292O60281 2723 aa12.3□□□□□ -0.44
SRP54-205ENST00000554803 PALM3A6NDB9 673 aaPredicted RBP12.3□□□□□ -0.44
SRP54-205ENST00000554803 SNHG28P0DPA3 235 aa12.3□□□□□ -0.44
SRP54-205ENST00000554803 FDX1P10109 184 aa12.3□□□□□ -0.44
SRP54-205ENST00000554803 PLA2G4AP47712 749 aa12.3□□□□□ -0.44
SRP54-205ENST00000554803 CNTN2Q02246 1040 aa12.3□□□□□ -0.44
SRP54-205ENST00000554803 ZNF543Q08ER8 600 aa12.3□□□□□ -0.44
SRP54-205ENST00000554803 PAK1Q13153 545 aa12.3□□□□□ -0.44
SRP54-205ENST00000554803 PKN1Q16512 942 aa12.3□□□□□ -0.44
SRP54-205ENST00000554803 MAP9Q49MG5 647 aa12.3□□□□□ -0.44
SRP54-205ENST00000554803 SLFN13Q68D06 897 aa12.3□□□□□ -0.44
SRP54-205ENST00000554803 ISM2Q6H9L7 571 aa12.3□□□□□ -0.44
SRP54-205ENST00000554803 IQCEQ6IPM2 695 aa12.3□□□□□ -0.44
SRP54-205ENST00000554803 TTBK2Q6IQ55 1244 aa12.3□□□□□ -0.44
SRP54-205ENST00000554803 TMCO2Q7Z6W1 182 aaPredicted RBP12.3□□□□□ -0.44
SRP54-205ENST00000554803 FAM114A1Q8IWE2 563 aa12.3□□□□□ -0.44
SRP54-205ENST00000554803 CPXCR1Q8N123 301 aa12.3□□□□□ -0.44
SRP54-205ENST00000554803 FAM133AQ8N9E0 248 aa12.3□□□□□ -0.44
SRP54-205ENST00000554803 GMCL1P1Q8NEA9 526 aa12.3□□□□□ -0.44
SRP54-205ENST00000554803 CCDC148Q8NFR7 591 aa12.3□□□□□ -0.44
SRP54-205ENST00000554803 AK8Q96MA6 479 aa12.3□□□□□ -0.44
SRP54-205ENST00000554803 NAPGQ99747 312 aaPredicted RBP12.3□□□□□ -0.44
SRP54-205ENST00000554803 ZBED2Q9BTP6 218 aa12.3□□□□□ -0.44
SRP54-205ENST00000554803 GPCPD1Q9NPB8 672 aa12.3□□□□□ -0.44
SRP54-205ENST00000554803 KCNJ14Q9UNX9 436 aa12.3□□□□□ -0.44
SRP54-205ENST00000554803 KMT2BQ9UMN6 2715 aaPredicted RBP12.3□□□□□ -0.44
SRP54-205ENST00000554803 TPRP12270 2363 aaKnown RBP12.29□□□□□ -0.44
SRP54-205ENST00000554803 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.29□□□□□ -0.44
SRP54-205ENST00000554803 hCG_1642624A0A1W2PR95 340 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 ASB14A6NK59 587 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 PPP1R3GB7ZBB8 358 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 F5H6K3 240 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 MAP2K7O14733 419 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 ZBED4O75132 1171 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 GJB5O95377 273 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 PARP1P09874 1014 aaKnown RBP12.29□□□□□ -0.44
SRP54-205ENST00000554803 PRR29P0C7W0 189 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 PRPHP41219 470 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 KRT83P78385 493 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 KLRC3Q07444 240 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 COL19A1Q14993 1142 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 E2F4Q16254 413 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 CCDC96Q2M329 555 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 COBLL1Q53SF7 1204 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 IQSEC1Q6DN90 963 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 FOXR2Q6PJQ5 311 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 TOGARAM2Q6ZUX3 1019 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 KCTD1Q719H9 257 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 ERMP1Q7Z2K6 904 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 DAGLBQ8NCG7 672 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 EDAQ92838 391 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 DHX58Q96C10 678 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 PABPC5Q96DU9 382 aaKnown RBP12.29□□□□□ -0.44
SRP54-205ENST00000554803 MRPL38Q96DV4 380 aaKnown RBP12.29□□□□□ -0.44
SRP54-205ENST00000554803 WDR24Q96S15 920 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 RAD9AQ99638 391 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 UBA5Q9GZZ9 404 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 THAP9Q9H5L6 903 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 HAUS4Q9H6D7 363 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 VIPAS39Q9H9C1 493 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 RAVER2Q9HCJ3 691 aaKnown RBP12.29□□□□□ -0.44
SRP54-205ENST00000554803 MED4Q9NPJ6 270 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 SAMSN1Q9NSI8 373 aaKnown RBP12.29□□□□□ -0.44
SRP54-205ENST00000554803 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.29□□□□□ -0.44
SRP54-205ENST00000554803 MUTYHQ9UIF7 546 aa12.29□□□□□ -0.44
SRP54-205ENST00000554803 CACNA1GO43497 2377 aa12.28□□□□□ -0.44
SRP54-205ENST00000554803 CTAGE15A4D2H0 777 aa12.28□□□□□ -0.44
SRP54-205ENST00000554803 N4BP3O15049 544 aa12.28□□□□□ -0.44
SRP54-205ENST00000554803 CYTH3O43739 400 aa12.28□□□□□ -0.44
SRP54-205ENST00000554803 CTAGE8P0CG41 777 aa12.28□□□□□ -0.44
SRP54-205ENST00000554803 SCG2P13521 617 aa12.28□□□□□ -0.44
SRP54-205ENST00000554803 SLC16A2P36021 539 aa12.28□□□□□ -0.44
SRP54-205ENST00000554803 DEFB103AP81534 67 aa12.28□□□□□ -0.44
SRP54-205ENST00000554803 PURAQ00577 322 aaKnown RBP12.28□□□□□ -0.44
SRP54-205ENST00000554803 CKAP4Q07065 602 aaKnown RBP12.28□□□□□ -0.44
SRP54-205ENST00000554803 SLC20A2Q08357 652 aa12.28□□□□□ -0.44
SRP54-205ENST00000554803 NR5A1Q13285 461 aa12.28□□□□□ -0.44
SRP54-205ENST00000554803 SMC1AQ14683 1233 aaKnown RBP12.28□□□□□ -0.44
SRP54-205ENST00000554803 PFKFB3Q16875 520 aaPredicted RBP12.28□□□□□ -0.44
SRP54-205ENST00000554803 TIGD5Q53EQ6 642 aa12.28□□□□□ -0.44
SRP54-205ENST00000554803 ASPRV1Q53RT3 343 aa12.28□□□□□ -0.44
SRP54-205ENST00000554803 TMEM63BQ5T3F8 832 aa12.28□□□□□ -0.44
SRP54-205ENST00000554803 TAPT1Q6NXT6 567 aa12.28□□□□□ -0.44
SRP54-205ENST00000554803 WDR93Q6P2C0 686 aa12.28□□□□□ -0.44
SRP54-205ENST00000554803 CTAGE6Q86UF2 777 aa12.28□□□□□ -0.44
SRP54-205ENST00000554803 CTAGE4Q8IX94 777 aa12.28□□□□□ -0.44
SRP54-205ENST00000554803 DCAF4Q8WV16 495 aa12.28□□□□□ -0.44
SRP54-205ENST00000554803 SLC38A10Q9HBR0 1119 aa12.28□□□□□ -0.44
SRP54-205ENST00000554803 ALG13Q9NP73 1137 aaKnown RBP12.28□□□□□ -0.44
SRP54-205ENST00000554803 PDGFCQ9NRA1 345 aa12.28□□□□□ -0.44
SRP54-205ENST00000554803 CTDP1Q9Y5B0 961 aaPredicted RBP12.28□□□□□ -0.44
SRP54-205ENST00000554803 COL4A6Q14031 1691 aa12.28□□□□□ -0.44
SRP54-205ENST00000554803 VPS13AQ96RL7 3174 aa12.28□□□□□ -0.44
SRP54-205ENST00000554803 ANO9A1A5B4 782 aa12.27□□□□□ -0.45
SRP54-205ENST00000554803 BICDL2A1A5D9 508 aa12.27□□□□□ -0.45
SRP54-205ENST00000554803 TARSL2A2RTX5 802 aaKnown RBP12.27□□□□□ -0.45
SRP54-205ENST00000554803 SOWAHBA6NEL2 793 aa12.27□□□□□ -0.45
SRP54-205ENST00000554803 KLRF2D3W0D1 207 aa12.27□□□□□ -0.45
SRP54-205ENST00000554803 CLSTN1O94985 981 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms