RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 PRPF38AQ8NAV1 312 aaKnown RBP6.97□□□□□ -1.29
SCFD1-211ENST00000554437 OR5AN1Q8NGI8 311 aa6.97□□□□□ -1.29
SCFD1-211ENST00000554437 MTG2Q9H4K7 406 aa6.97□□□□□ -1.29
SCFD1-211ENST00000554437 SLC5A4Q9NY91 659 aa6.97□□□□□ -1.29
SCFD1-211ENST00000554437 SAE1Q9UBE0 346 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-211ENST00000554437 B4GALT4O60513 344 aa6.96□□□□□ -1.3
SCFD1-211ENST00000554437 PRKD3O94806 890 aa6.96□□□□□ -1.3
SCFD1-211ENST00000554437 PCDH8O95206 1070 aa6.96□□□□□ -1.3
SCFD1-211ENST00000554437 ZNF888P0CJ79 500 aaPredicted RBP6.96□□□□□ -1.3
SCFD1-211ENST00000554437 RRADP55042 308 aa6.96□□□□□ -1.3
SCFD1-211ENST00000554437 EVA1CP58658 441 aa6.96□□□□□ -1.3
SCFD1-211ENST00000554437 PDCD1Q15116 288 aa6.96□□□□□ -1.3
SCFD1-211ENST00000554437 ZBTB41Q5SVQ8 909 aa6.96□□□□□ -1.3
SCFD1-211ENST00000554437 LGI4Q8N135 537 aa6.96□□□□□ -1.3
SCFD1-211ENST00000554437 AHCYL2Q96HN2 611 aaKnown RBP6.96□□□□□ -1.3
SCFD1-211ENST00000554437 BRINP2Q9C0B6 783 aa6.96□□□□□ -1.3
SCFD1-211ENST00000554437 XYLT2Q9H1B5 865 aa6.96□□□□□ -1.3
SCFD1-211ENST00000554437 SYNPO2Q9UMS6 1093 aa6.96□□□□□ -1.3
SCFD1-211ENST00000554437 PTPN22Q9Y2R2 807 aa6.96□□□□□ -1.3
SCFD1-211ENST00000554437 NOP58Q9Y2X3 529 aaKnown RBP6.96□□□□□ -1.3
SCFD1-211ENST00000554437 PPP2R3BQ9Y5P8 575 aa6.96□□□□□ -1.3
SCFD1-211ENST00000554437 MYPNQ86TC9 1320 aa6.96□□□□□ -1.3
SCFD1-211ENST00000554437 PRSS38A1L453 326 aa6.95□□□□□ -1.3
SCFD1-211ENST00000554437 GOLGA8AA7E2F4 631 aa6.95□□□□□ -1.3
SCFD1-211ENST00000554437 GOLGA8BA8MQT2 603 aa6.95□□□□□ -1.3
SCFD1-211ENST00000554437 B4GALT3O60512 393 aa6.95□□□□□ -1.3
SCFD1-211ENST00000554437 INHBBP09529 407 aa6.95□□□□□ -1.3
SCFD1-211ENST00000554437 CLEC2LP0C7M8 214 aa6.95□□□□□ -1.3
SCFD1-211ENST00000554437 MEOX1P50221 254 aa6.95□□□□□ -1.3
SCFD1-211ENST00000554437 MANFP55145 182 aaKnown RBP6.95□□□□□ -1.3
SCFD1-211ENST00000554437 ANTXR2P58335 489 aa6.95□□□□□ -1.3
SCFD1-211ENST00000554437 FAM50AQ14320 339 aaKnown RBP6.95□□□□□ -1.3
SCFD1-211ENST00000554437 CCDC62Q6P9F0 684 aa6.95□□□□□ -1.3
SCFD1-211ENST00000554437 LARP4Q71RC2 724 aaKnown RBP eCLIP6.95□□□□□ -1.3
SCFD1-211ENST00000554437 BMP8AQ7Z5Y6 402 aa6.95□□□□□ -1.3
SCFD1-211ENST00000554437 DYDC2Q96IM9 177 aa6.95□□□□□ -1.3
SCFD1-211ENST00000554437 DENND2AQ9ULE3 1009 aa6.95□□□□□ -1.3
SCFD1-211ENST00000554437 hCG_2014768A0A024R1R8 64 aa6.94□□□□□ -1.3
SCFD1-211ENST00000554437 A0A0A6YYJ9 748 aa6.94□□□□□ -1.3
SCFD1-211ENST00000554437 OPHN1O60890 802 aa6.94□□□□□ -1.3
SCFD1-211ENST00000554437 CNR2P34972 360 aa6.94□□□□□ -1.3
SCFD1-211ENST00000554437 GUCY2FP51841 1108 aa6.94□□□□□ -1.3
SCFD1-211ENST00000554437 SCAND1P57086 179 aa6.94□□□□□ -1.3
SCFD1-211ENST00000554437 PCOLCEQ15113 449 aa6.94□□□□□ -1.3
SCFD1-211ENST00000554437 ZNF568Q3ZCX4 644 aa6.94□□□□□ -1.3
SCFD1-211ENST00000554437 CT83Q5H943 113 aa6.94□□□□□ -1.3
SCFD1-211ENST00000554437 TRIM68Q6AZZ1 485 aa6.94□□□□□ -1.3
SCFD1-211ENST00000554437 NECAB2Q7Z6G3 386 aa6.94□□□□□ -1.3
SCFD1-211ENST00000554437 FRMD5Q7Z6J6 570 aa6.94□□□□□ -1.3
SCFD1-211ENST00000554437 PLEKHH3Q7Z736 793 aa6.94□□□□□ -1.3
SCFD1-211ENST00000554437 CMIPQ8IY22 773 aa6.94□□□□□ -1.3
SCFD1-211ENST00000554437 BCL6BQ8N143 479 aaPredicted RBP6.94□□□□□ -1.3
SCFD1-211ENST00000554437 ACAP3Q96P50 834 aa6.94□□□□□ -1.3
SCFD1-211ENST00000554437 NOL10Q9BSC4 688 aaKnown RBP6.94□□□□□ -1.3
SCFD1-211ENST00000554437 PITHD1Q9GZP4 211 aaPredicted RBP6.94□□□□□ -1.3
SCFD1-211ENST00000554437 KIAA1683Q9H0B3 1180 aa6.94□□□□□ -1.3
SCFD1-211ENST00000554437 ADAM7Q9H2U9 754 aa6.94□□□□□ -1.3
SCFD1-211ENST00000554437 C14orf119Q9NWQ9 140 aa6.94□□□□□ -1.3
SCFD1-211ENST00000554437 FAM184BQ9ULE4 1060 aa6.94□□□□□ -1.3
SCFD1-211ENST00000554437 USP18Q9UMW8 372 aa6.94□□□□□ -1.3
SCFD1-211ENST00000554437 INVSQ9Y283 1065 aa6.94□□□□□ -1.3
SCFD1-211ENST00000554437 DUSP10Q9Y6W6 482 aa6.94□□□□□ -1.3
SCFD1-211ENST00000554437 MRE11P49959 708 aa6.93□□□□□ -1.3
SCFD1-211ENST00000554437 ANAPC15P60006 121 aa6.93□□□□□ -1.3
SCFD1-211ENST00000554437 ZMAT1Q5H9K5 638 aa6.93□□□□□ -1.3
SCFD1-211ENST00000554437 FERMT3Q86UX7 667 aa6.93□□□□□ -1.3
SCFD1-211ENST00000554437 CNTD1Q8N815 330 aa6.93□□□□□ -1.3
SCFD1-211ENST00000554437 HIST1H2AHQ96KK5 128 aa6.93□□□□□ -1.3
SCFD1-211ENST00000554437 HIST1H2AJQ99878 128 aa6.93□□□□□ -1.3
SCFD1-211ENST00000554437 PUS7LQ9H0K6 701 aaKnown RBP6.93□□□□□ -1.3
SCFD1-211ENST00000554437 WNT8AQ9H1J5 351 aa6.93□□□□□ -1.3
SCFD1-211ENST00000554437 POLR3BQ9NW08 1133 aaPredicted RBP6.93□□□□□ -1.3
SCFD1-211ENST00000554437 DNAI1Q9UI46 699 aa6.93□□□□□ -1.3
SCFD1-211ENST00000554437 PCDHB6Q9Y5E3 794 aa6.93□□□□□ -1.3
SCFD1-211ENST00000554437 NUMBLQ9Y6R0 609 aa6.93□□□□□ -1.3
SCFD1-211ENST00000554437 ALG1L2C9J202 215 aa6.92□□□□□ -1.3
SCFD1-211ENST00000554437 PFKMP08237 780 aa6.92□□□□□ -1.3
SCFD1-211ENST00000554437 IGBP1P78318 339 aa6.92□□□□□ -1.3
SCFD1-211ENST00000554437 UGT8Q16880 541 aa6.92□□□□□ -1.3
SCFD1-211ENST00000554437 UBXN11Q5T124 520 aa6.92□□□□□ -1.3
SCFD1-211ENST00000554437 KLHDC10Q6PID8 442 aa6.92□□□□□ -1.3
SCFD1-211ENST00000554437 ARHGEF18Q6ZSZ5 1173 aa6.92□□□□□ -1.3
SCFD1-211ENST00000554437 CDYL2Q8N8U2 506 aa6.92□□□□□ -1.3
SCFD1-211ENST00000554437 TGFBRAP1Q8WUH2 860 aa6.92□□□□□ -1.3
SCFD1-211ENST00000554437 LMBR1Q8WVP7 490 aa6.92□□□□□ -1.3
SCFD1-211ENST00000554437 EAF2Q96CJ1 260 aaPredicted RBP6.92□□□□□ -1.3
SCFD1-211ENST00000554437 WDR92Q96MX6 357 aa6.92□□□□□ -1.3
SCFD1-211ENST00000554437 VWA7Q9Y334 891 aa6.92□□□□□ -1.3
SCFD1-211ENST00000554437 H2AFYO75367 372 aaKnown RBP6.91□□□□□ -1.3
SCFD1-211ENST00000554437 LPLP06858 475 aa6.91□□□□□ -1.3
SCFD1-211ENST00000554437 HOXA5P20719 270 aa6.91□□□□□ -1.3
SCFD1-211ENST00000554437 SESN2P58004 480 aaPredicted RBP6.91□□□□□ -1.3
SCFD1-211ENST00000554437 PPP2CBP62714 309 aa6.91□□□□□ -1.3
SCFD1-211ENST00000554437 PPP2CAP67775 309 aa6.91□□□□□ -1.3
SCFD1-211ENST00000554437 ITKQ08881 620 aa6.91□□□□□ -1.3
SCFD1-211ENST00000554437 ADAM15Q13444 863 aa6.91□□□□□ -1.3
SCFD1-211ENST00000554437 SURF1Q15526 300 aa6.91□□□□□ -1.3
SCFD1-211ENST00000554437 FSCN1Q16658 493 aaKnown RBP6.91□□□□□ -1.3
SCFD1-211ENST00000554437 ZNF827Q17R98 1081 aa6.91□□□□□ -1.3
SCFD1-211ENST00000554437 PITRM1Q5JRX3 1037 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms