RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 TARS2Q9BW92 718 aaKnown RBP6.78□□□□□ -1.32
ATXN3-225ENST00000554214 OR10A2Q9H208 303 aa6.78□□□□□ -1.32
ATXN3-225ENST00000554214 CD248Q9HCU0 757 aa6.78□□□□□ -1.32
ATXN3-225ENST00000554214 THG1LQ9NWX6 298 aaKnown RBP6.78□□□□□ -1.32
ATXN3-225ENST00000554214 SAE1Q9UBE0 346 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-225ENST00000554214 TBX22Q9Y458 520 aa6.78□□□□□ -1.32
ATXN3-225ENST00000554214 TLDC2A0PJX2 215 aa6.77□□□□□ -1.33
ATXN3-225ENST00000554214 PATE3B3GLJ2 98 aa6.77□□□□□ -1.33
ATXN3-225ENST00000554214 ENPP3O14638 875 aa6.77□□□□□ -1.33
ATXN3-225ENST00000554214 FOXS1O43638 330 aa6.77□□□□□ -1.33
ATXN3-225ENST00000554214 MAFO75444 373 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-225ENST00000554214 ZNF20P17024 532 aa6.77□□□□□ -1.33
ATXN3-225ENST00000554214 ANTXR2P58335 489 aa6.77□□□□□ -1.33
ATXN3-225ENST00000554214 DSG1Q02413 1049 aa6.77□□□□□ -1.33
ATXN3-225ENST00000554214 NFYCQ13952 458 aa6.77□□□□□ -1.33
ATXN3-225ENST00000554214 SART3Q15020 963 aaKnown RBP6.77□□□□□ -1.33
ATXN3-225ENST00000554214 ZXDCQ2QGD7 858 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-225ENST00000554214 PRAMEF9Q5VWM5 478 aa6.77□□□□□ -1.33
ATXN3-225ENST00000554214 PASD1Q8IV76 773 aa6.77□□□□□ -1.33
ATXN3-225ENST00000554214 BCL6BQ8N143 479 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-225ENST00000554214 PPM1KQ8N3J5 372 aa6.77□□□□□ -1.33
ATXN3-225ENST00000554214 Q8TCH9 128 aa6.77□□□□□ -1.33
ATXN3-225ENST00000554214 DVL3Q92997 716 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-225ENST00000554214 C1QTNF3Q9BXJ4 246 aa6.77□□□□□ -1.33
ATXN3-225ENST00000554214 KRTAP9-3Q9BYQ3 159 aa6.77□□□□□ -1.33
ATXN3-225ENST00000554214 PUF60Q9UHX1 559 aaKnown RBP6.77□□□□□ -1.33
ATXN3-225ENST00000554214 OAZ3Q9UMX2 235 aa6.77□□□□□ -1.33
ATXN3-225ENST00000554214 ZFR2Q9UPR6 939 aaKnown RBP6.77□□□□□ -1.33
ATXN3-225ENST00000554214 GAPVD1Q14C86 1478 aa6.77□□□□□ -1.33
ATXN3-225ENST00000554214 CDC14BO60729 498 aa6.76□□□□□ -1.33
ATXN3-225ENST00000554214 TIGD7Q6NT04 549 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-225ENST00000554214 ESRP1Q6NXG1 681 aaKnown RBP6.76□□□□□ -1.33
ATXN3-225ENST00000554214 ZNF585AQ6P3V2 769 aa6.76□□□□□ -1.33
ATXN3-225ENST00000554214 GGNQ86UU5 652 aa6.76□□□□□ -1.33
ATXN3-225ENST00000554214 ZZZ3Q8IYH5 903 aa6.76□□□□□ -1.33
ATXN3-225ENST00000554214 RTF1Q92541 710 aaKnown RBP6.76□□□□□ -1.33
ATXN3-225ENST00000554214 WWC2-AS2Q96NR7 200 aa6.76□□□□□ -1.33
ATXN3-225ENST00000554214 DPYSL5Q9BPU6 564 aa6.76□□□□□ -1.33
ATXN3-225ENST00000554214 KRTAP3-1Q9BYR8 98 aa6.76□□□□□ -1.33
ATXN3-225ENST00000554214 KLC2Q9H0B6 622 aa6.76□□□□□ -1.33
ATXN3-225ENST00000554214 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.76□□□□□ -1.33
ATXN3-225ENST00000554214 SYNJ1O43426 1573 aa6.75□□□□□ -1.33
ATXN3-225ENST00000554214 MATN2O00339 956 aa6.75□□□□□ -1.33
ATXN3-225ENST00000554214 APOL3O95236 402 aa6.75□□□□□ -1.33
ATXN3-225ENST00000554214 MYCLP1P12525 358 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-225ENST00000554214 KPNA1P52294 538 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-225ENST00000554214 GYS2P54840 703 aa6.75□□□□□ -1.33
ATXN3-225ENST00000554214 ADAM15Q13444 863 aa6.75□□□□□ -1.33
ATXN3-225ENST00000554214 DGKDQ16760 1214 aa6.75□□□□□ -1.33
ATXN3-225ENST00000554214 GIMAP6Q6P9H5 292 aa6.75□□□□□ -1.33
ATXN3-225ENST00000554214 PHYKPLQ8IUZ5 450 aa6.75□□□□□ -1.33
ATXN3-225ENST00000554214 EFHBQ8N7U6 833 aa6.75□□□□□ -1.33
ATXN3-225ENST00000554214 OR14K1Q8NGZ2 314 aa6.75□□□□□ -1.33
ATXN3-225ENST00000554214 LEO1Q8WVC0 666 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-225ENST00000554214 GPR101Q96P66 508 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-225ENST00000554214 KCMF1Q9P0J7 381 aa6.75□□□□□ -1.33
ATXN3-225ENST00000554214 DENND2AQ9ULE3 1009 aa6.75□□□□□ -1.33
ATXN3-225ENST00000554214 VWA7Q9Y334 891 aa6.75□□□□□ -1.33
ATXN3-225ENST00000554214 SOGA1O94964 1423 aa6.75□□□□□ -1.33
ATXN3-225ENST00000554214 PRPF6O94906 941 aaKnown RBP6.74□□□□□ -1.33
ATXN3-225ENST00000554214 BCAR1P56945 870 aa6.74□□□□□ -1.33
ATXN3-225ENST00000554214 SMAD3P84022 425 aaKnown RBP6.74□□□□□ -1.33
ATXN3-225ENST00000554214 ADCY2Q08462 1091 aa6.74□□□□□ -1.33
ATXN3-225ENST00000554214 MYBPC3Q14896 1274 aa6.74□□□□□ -1.33
ATXN3-225ENST00000554214 SEPT7Q16181 437 aaKnown RBP6.74□□□□□ -1.33
ATXN3-225ENST00000554214 PLEKHG4Q58EX7 1191 aa6.74□□□□□ -1.33
ATXN3-225ENST00000554214 LCE5AQ5TCM9 118 aa6.74□□□□□ -1.33
ATXN3-225ENST00000554214 KLHDC10Q6PID8 442 aa6.74□□□□□ -1.33
ATXN3-225ENST00000554214 SMC1BQ8NDV3 1235 aa6.74□□□□□ -1.33
ATXN3-225ENST00000554214 CFHR4Q92496 578 aa6.74□□□□□ -1.33
ATXN3-225ENST00000554214 RPGRQ92834 1020 aaKnown RBP6.74□□□□□ -1.33
ATXN3-225ENST00000554214 BORCS6Q96GS4 357 aa6.74□□□□□ -1.33
ATXN3-225ENST00000554214 MYL10Q9BUA6 226 aa6.74□□□□□ -1.33
ATXN3-225ENST00000554214 TCAF1Q9Y4C2 921 aa6.74□□□□□ -1.33
ATXN3-225ENST00000554214 KIF13AQ9H1H9 1805 aa6.73□□□□□ -1.33
ATXN3-225ENST00000554214 A0A087X0B3 334 aa6.73□□□□□ -1.33
ATXN3-225ENST00000554214 TGM5O43548 720 aa6.73□□□□□ -1.33
ATXN3-225ENST00000554214 H2AFYO75367 372 aaKnown RBP6.73□□□□□ -1.33
ATXN3-225ENST00000554214 SESN2P58004 480 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-225ENST00000554214 HGFACQ04756 655 aa6.73□□□□□ -1.33
ATXN3-225ENST00000554214 LRRC32Q14392 662 aa6.73□□□□□ -1.33
ATXN3-225ENST00000554214 PUM1Q14671 1186 aaKnown RBP eCLIP6.73□□□□□ -1.33
ATXN3-225ENST00000554214 HS1BP3Q53T59 392 aa6.73□□□□□ -1.33
ATXN3-225ENST00000554214 UNQ6494/PRO21346Q6UXR6 183 aa6.73□□□□□ -1.33
ATXN3-225ENST00000554214 FUKQ8N0W3 1084 aa6.73□□□□□ -1.33
ATXN3-225ENST00000554214 C7orf31Q8N865 590 aa6.73□□□□□ -1.33
ATXN3-225ENST00000554214 OR5AN1Q8NGI8 311 aa6.73□□□□□ -1.33
ATXN3-225ENST00000554214 OR2W6PQ8NHA6 318 aa6.73□□□□□ -1.33
ATXN3-225ENST00000554214 PLA2G12BQ9BX93 195 aa6.73□□□□□ -1.33
ATXN3-225ENST00000554214 POFUT1Q9H488 388 aa6.73□□□□□ -1.33
ATXN3-225ENST00000554214 ZMAT4Q9H898 229 aa6.73□□□□□ -1.33
ATXN3-225ENST00000554214 SPTLC3Q9NUV7 552 aa6.73□□□□□ -1.33
ATXN3-225ENST00000554214 MYRFQ9Y2G1 1151 aa6.73□□□□□ -1.33
ATXN3-225ENST00000554214 CTDP1Q9Y5B0 961 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-225ENST00000554214 GSG1L2A8MUP6 293 aa6.72□□□□□ -1.33
ATXN3-225ENST00000554214 RAD17O75943 681 aa6.72□□□□□ -1.33
ATXN3-225ENST00000554214 CD40P25942 277 aa6.72□□□□□ -1.33
ATXN3-225ENST00000554214 ATP2C1P98194 919 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-225ENST00000554214 TAF7LQ5H9L4 462 aa6.72□□□□□ -1.33
ATXN3-225ENST00000554214 KANSL1Q7Z3B3 1105 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms