RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 BMP15O95972 392 aa25.93■■□□□ 1.74
NEK9-203ENST00000553945 EIF4BP23588 611 aaKnown RBP25.93■■□□□ 1.74
NEK9-203ENST00000553945 CDC42EP1Q00587 391 aa25.93■■□□□ 1.74
NEK9-203ENST00000553945 KRT79Q5XKE5 535 aa25.93■■□□□ 1.74
NEK9-203ENST00000553945 ARL6IP4Q66PJ3 421 aaKnown RBP25.93■■□□□ 1.74
NEK9-203ENST00000553945 KSR1Q8IVT5 923 aa25.93■■□□□ 1.74
NEK9-203ENST00000553945 TCP11Q8WWU5 503 aa25.93■■□□□ 1.74
NEK9-203ENST00000553945 MTRQ99707 1265 aa25.93■■□□□ 1.74
NEK9-203ENST00000553945 FTHL17Q9BXU8 183 aa25.93■■□□□ 1.74
NEK9-203ENST00000553945 TTYH1Q9H313 450 aaPredicted RBP25.93■■□□□ 1.74
NEK9-203ENST00000553945 SEMA6BQ9H3T3 888 aa25.93■■□□□ 1.74
NEK9-203ENST00000553945 ZSCAN16Q9H4T2 348 aaPredicted RBP25.93■■□□□ 1.74
NEK9-203ENST00000553945 TMEM265A0A087WTH1 108 aa25.92■■□□□ 1.74
NEK9-203ENST00000553945 ENPP3O14638 875 aa25.92■■□□□ 1.74
NEK9-203ENST00000553945 GJB5O95377 273 aa25.92■■□□□ 1.74
NEK9-203ENST00000553945 MUTP22033 750 aa25.92■■□□□ 1.74
NEK9-203ENST00000553945 CDC25AP30304 524 aa25.92■■□□□ 1.74
NEK9-203ENST00000553945 ECM1Q16610 540 aa25.92■■□□□ 1.74
NEK9-203ENST00000553945 FAM228AQ86W67 206 aa25.92■■□□□ 1.74
NEK9-203ENST00000553945 PRPF31Q8WWY3 499 aaKnown RBP25.92■■□□□ 1.74
NEK9-203ENST00000553945 PSPC1Q8WXF1 523 aaKnown RBP25.92■■□□□ 1.74
NEK9-203ENST00000553945 TMX1Q9H3N1 280 aa25.92■■□□□ 1.74
NEK9-203ENST00000553945 SLC28A3Q9HAS3 691 aa25.92■■□□□ 1.74
NEK9-203ENST00000553945 DBR1Q9UK59 544 aaKnown RBP25.92■■□□□ 1.74
NEK9-203ENST00000553945 KIAA1024Q9UPX6 916 aa25.92■■□□□ 1.74
NEK9-203ENST00000553945 COL4A3BPQ9Y5P4 624 aa25.92■■□□□ 1.74
NEK9-203ENST00000553945 CLIC4Q9Y696 253 aa25.92■■□□□ 1.74
NEK9-203ENST00000553945 A0A087WZ62 844 aa25.91■■□□□ 1.74
NEK9-203ENST00000553945 DGAT1O75907 488 aa25.91■■□□□ 1.74
NEK9-203ENST00000553945 LINC01599Q8WXQ3 324 aa25.91■■□□□ 1.74
NEK9-203ENST00000553945 NLRP4Q96MN2 994 aa25.91■■□□□ 1.74
NEK9-203ENST00000553945 RAD9AQ99638 391 aa25.91■■□□□ 1.74
NEK9-203ENST00000553945 FDXACB1Q9BRP7 624 aaPredicted RBP25.91■■□□□ 1.74
NEK9-203ENST00000553945 GCOM2Q9BZD3 368 aaPredicted RBP25.91■■□□□ 1.74
NEK9-203ENST00000553945 ZNF576Q9H609 170 aa25.91■■□□□ 1.74
NEK9-203ENST00000553945 ATP6V0A4Q9HBG4 840 aa25.91■■□□□ 1.74
NEK9-203ENST00000553945 DDX19AQ9NUU7 478 aaKnown RBP25.91■■□□□ 1.74
NEK9-203ENST00000553945 ARHGEF35A5YM69 484 aa25.9■■□□□ 1.74
NEK9-203ENST00000553945 USO1O60763 962 aaKnown RBP25.9■■□□□ 1.74
NEK9-203ENST00000553945 CA3P07451 260 aa25.9■■□□□ 1.74
NEK9-203ENST00000553945 DARSP14868 501 aaKnown RBP25.9■■□□□ 1.74
NEK9-203ENST00000553945 FOXD4L5Q5VV16 416 aaPredicted RBP25.9■■□□□ 1.74
NEK9-203ENST00000553945 RTN4RL1Q86UN2 441 aaPredicted RBP25.9■■□□□ 1.74
NEK9-203ENST00000553945 ZNF410Q86VK4 478 aa25.9■■□□□ 1.74
NEK9-203ENST00000553945 FOXD4L4Q8WXT5 416 aaPredicted RBP25.9■■□□□ 1.74
NEK9-203ENST00000553945 TOP1MTQ969P6 601 aa25.9■■□□□ 1.74
NEK9-203ENST00000553945 XPNPEP1Q9NQW7 623 aa25.9■■□□□ 1.74
NEK9-203ENST00000553945 MTMR10Q9NXD2 777 aa25.9■■□□□ 1.74
NEK9-203ENST00000553945 CSDE1O75534 798 aaKnown RBP25.89■■□□□ 1.74
NEK9-203ENST00000553945 SRGAP2CP0DJJ0 459 aa25.89■■□□□ 1.74
NEK9-203ENST00000553945 CEBPZQ03701 1054 aaKnown RBP25.89■■□□□ 1.74
NEK9-203ENST00000553945 LAMTOR4Q0VGL1 99 aa25.89■■□□□ 1.74
NEK9-203ENST00000553945 ZRSR1Q15695 479 aaKnown RBP25.89■■□□□ 1.74
NEK9-203ENST00000553945 PPP2R2DQ66LE6 453 aa25.89■■□□□ 1.74
NEK9-203ENST00000553945 MMTAG2Q9BU76 263 aaKnown RBP25.89■■□□□ 1.74
NEK9-203ENST00000553945 DENND3A2RUS2 1198 aa25.88■■□□□ 1.73
NEK9-203ENST00000553945 LCHNA4D1U4 455 aa25.88■■□□□ 1.73
NEK9-203ENST00000553945 MGEA5O60502 916 aa25.88■■□□□ 1.73
NEK9-203ENST00000553945 PDIA4P13667 645 aaKnown RBP25.88■■□□□ 1.73
NEK9-203ENST00000553945 FGFR4P22455 802 aa25.88■■□□□ 1.73
NEK9-203ENST00000553945 MAEAQ7L5Y9 396 aa25.88■■□□□ 1.73
NEK9-203ENST00000553945 ADAM2Q99965 735 aa25.88■■□□□ 1.73
NEK9-203ENST00000553945 TSPYL2Q9H2G4 693 aaPredicted RBP25.88■■□□□ 1.73
NEK9-203ENST00000553945 ASAP2O43150 1006 aa25.87■■□□□ 1.73
NEK9-203ENST00000553945 IBSPP21815 317 aaPredicted RBP25.87■■□□□ 1.73
NEK9-203ENST00000553945 PADI6Q6TGC4 694 aa25.87■■□□□ 1.73
NEK9-203ENST00000553945 DNM3Q9UQ16 869 aa25.87■■□□□ 1.73
NEK9-203ENST00000553945 INSL6Q9Y581 213 aa25.87■■□□□ 1.73
NEK9-203ENST00000553945 CHD7Q9P2D1 2997 aa25.87■■□□□ 1.73
NEK9-203ENST00000553945 MYH15Q9Y2K3 1946 aa25.86■■□□□ 1.73
NEK9-203ENST00000553945 ZSCAN22P10073 491 aaPredicted RBP25.86■■□□□ 1.73
NEK9-203ENST00000553945 MXD4Q14582 209 aaPredicted RBP25.86■■□□□ 1.73
NEK9-203ENST00000553945 PTPAQ15257 358 aa25.86■■□□□ 1.73
NEK9-203ENST00000553945 FAM43BQ6ZT52 329 aaPredicted RBP25.86■■□□□ 1.73
NEK9-203ENST00000553945 CABP7Q86V35 215 aa25.86■■□□□ 1.73
NEK9-203ENST00000553945 MCPH1Q8NEM0 835 aa25.86■■□□□ 1.73
NEK9-203ENST00000553945 AK8Q96MA6 479 aa25.86■■□□□ 1.73
NEK9-203ENST00000553945 USP28Q96RU2 1077 aa25.86■■□□□ 1.73
NEK9-203ENST00000553945 YME1L1Q96TA2 773 aa25.86■■□□□ 1.73
NEK9-203ENST00000553945 INO80BQ9C086 356 aaPredicted RBP25.86■■□□□ 1.73
NEK9-203ENST00000553945 BHMT2Q9H2M3 363 aa25.86■■□□□ 1.73
NEK9-203ENST00000553945 E9PMD0 336 aa25.85■■□□□ 1.73
NEK9-203ENST00000553945 ARHGEF15O94989 841 aa25.85■■□□□ 1.73
NEK9-203ENST00000553945 ARL2P36404 184 aa25.85■■□□□ 1.73
NEK9-203ENST00000553945 HTRA4P83105 476 aaPredicted RBP25.85■■□□□ 1.73
NEK9-203ENST00000553945 GRIN1Q05586 938 aa25.85■■□□□ 1.73
NEK9-203ENST00000553945 BECN1Q14457 450 aa25.85■■□□□ 1.73
NEK9-203ENST00000553945 GRIN2CQ14957 1233 aa25.85■■□□□ 1.73
NEK9-203ENST00000553945 RNF149Q8NC42 400 aa25.85■■□□□ 1.73
NEK9-203ENST00000553945 CDK5RAP3Q96JB5 506 aa25.85■■□□□ 1.73
NEK9-203ENST00000553945 GUCD1Q96NT3 240 aa25.85■■□□□ 1.73
NEK9-203ENST00000553945 POLR3FQ9H1D9 316 aaPredicted RBP25.85■■□□□ 1.73
NEK9-203ENST00000553945 IFT122Q9HBG6 1241 aa25.85■■□□□ 1.73
NEK9-203ENST00000553945 RGS18Q9NS28 235 aa25.85■■□□□ 1.73
NEK9-203ENST00000553945 ZSCAN20P17040 1043 aaPredicted RBP25.84■■□□□ 1.73
NEK9-203ENST00000553945 SFPQP23246 707 aaKnown RBP eCLIP25.84■■□□□ 1.73
NEK9-203ENST00000553945 MARCKSP29966 332 aaPredicted RBP25.84■■□□□ 1.73
NEK9-203ENST00000553945 LONP1P36776 959 aaKnown RBP25.84■■□□□ 1.73
NEK9-203ENST00000553945 UBA7P41226 1012 aa25.84■■□□□ 1.73
NEK9-203ENST00000553945 TAP1Q03518 808 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms