RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 PBKQ96KB5 322 aa15.85■□□□□ 0.13
ACTN1-211ENST00000553882 UNC45AQ9H3U1 944 aa15.85■□□□□ 0.13
ACTN1-211ENST00000553882 TAF1DQ9H5J8 278 aaPredicted RBP15.85■□□□□ 0.13
ACTN1-211ENST00000553882 ARHGEF10LQ9HCE6 1279 aa15.85■□□□□ 0.13
ACTN1-211ENST00000553882 AGPAT3Q9NRZ7 376 aa15.85■□□□□ 0.13
ACTN1-211ENST00000553882 FBXL5Q9UKA1 691 aa15.85■□□□□ 0.13
ACTN1-211ENST00000553882 IGSF9BQ9UPX0 1349 aa15.85■□□□□ 0.13
ACTN1-211ENST00000553882 YDJCA8MPS7 323 aa15.85■□□□□ 0.13
ACTN1-211ENST00000553882 ZEB2O60315 1214 aa15.85■□□□□ 0.13
ACTN1-211ENST00000553882 NPM3O75607 178 aaKnown RBP15.85■□□□□ 0.13
ACTN1-211ENST00000553882 FERP16591 822 aa15.85■□□□□ 0.13
ACTN1-211ENST00000553882 SOX5P35711 763 aa15.85■□□□□ 0.13
ACTN1-211ENST00000553882 PPP2R5CQ13362 524 aa15.85■□□□□ 0.13
ACTN1-211ENST00000553882 NAA35Q5VZE5 725 aa15.85■□□□□ 0.13
ACTN1-211ENST00000553882 ACTRT1Q8TDG2 376 aa15.85■□□□□ 0.13
ACTN1-211ENST00000553882 SCFD2Q8WU76 684 aa15.85■□□□□ 0.13
ACTN1-211ENST00000553882 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.85■□□□□ 0.13
ACTN1-211ENST00000553882 LXNQ9BS40 222 aa15.85■□□□□ 0.13
ACTN1-211ENST00000553882 NENFQ9UMX5 172 aa15.85■□□□□ 0.13
ACTN1-211ENST00000553882 FRMD4BQ9Y2L6 1034 aa15.85■□□□□ 0.13
ACTN1-211ENST00000553882 GTPBP10A4D1E9 387 aaKnown RBP15.84■□□□□ 0.13
ACTN1-211ENST00000553882 TISP43B9A030 160 aa15.84■□□□□ 0.13
ACTN1-211ENST00000553882 FKBP1AP62942 108 aaKnown RBP15.84■□□□□ 0.13
ACTN1-211ENST00000553882 MIGA2Q7L4E1 593 aa15.84■□□□□ 0.13
ACTN1-211ENST00000553882 ADAT2Q7Z6V5 191 aaKnown RBP15.84■□□□□ 0.13
ACTN1-211ENST00000553882 PALB2Q86YC2 1186 aa15.84■□□□□ 0.13
ACTN1-211ENST00000553882 SYCP3Q8IZU3 236 aa15.84■□□□□ 0.13
ACTN1-211ENST00000553882 OR2W6PQ8NHA6 318 aa15.84■□□□□ 0.13
ACTN1-211ENST00000553882 WHAMMQ8TF30 809 aa15.84■□□□□ 0.13
ACTN1-211ENST00000553882 SLC5A5Q92911 643 aa15.84■□□□□ 0.13
ACTN1-211ENST00000553882 HOOK2Q96ED9 719 aa15.84■□□□□ 0.13
ACTN1-211ENST00000553882 SH2D3AQ9BRG2 576 aa15.84■□□□□ 0.13
ACTN1-211ENST00000553882 PLAAQ9Y263 795 aa15.84■□□□□ 0.13
ACTN1-211ENST00000553882 KIF13BQ9NQT8 1826 aa15.84■□□□□ 0.13
ACTN1-211ENST00000553882 FRMPD4Q14CM0 1322 aa15.84■□□□□ 0.13
ACTN1-211ENST00000553882 BUB1BO60566 1050 aaPredicted RBP15.84■□□□□ 0.13
ACTN1-211ENST00000553882 APBA3O96018 575 aa15.84■□□□□ 0.13
ACTN1-211ENST00000553882 ZBTB48P10074 688 aaPredicted RBP15.84■□□□□ 0.13
ACTN1-211ENST00000553882 ECHS1P30084 290 aa15.84■□□□□ 0.13
ACTN1-211ENST00000553882 CEP85LQ5SZL2 805 aa15.84■□□□□ 0.13
ACTN1-211ENST00000553882 NT5DC3Q86UY8 548 aa15.84■□□□□ 0.13
ACTN1-211ENST00000553882 OLIG1Q8TAK6 271 aa15.84■□□□□ 0.13
ACTN1-211ENST00000553882 SLC35G2Q8TBE7 412 aa15.84■□□□□ 0.13
ACTN1-211ENST00000553882 CELF4Q9BZC1 486 aaKnown RBP15.84■□□□□ 0.13
ACTN1-211ENST00000553882 TSPYL1Q9H0U9 437 aa15.84■□□□□ 0.13
ACTN1-211ENST00000553882 ISCUQ9H1K1 167 aa15.84■□□□□ 0.13
ACTN1-211ENST00000553882 NEUROG2Q9H2A3 272 aa15.84■□□□□ 0.13
ACTN1-211ENST00000553882 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.84■□□□□ 0.13
ACTN1-211ENST00000553882 TAS2R14Q9NYV8 317 aa15.84■□□□□ 0.13
ACTN1-211ENST00000553882 SAMM50Q9Y512 469 aa15.84■□□□□ 0.13
ACTN1-211ENST00000553882 BRWD3Q6RI45 1802 aa15.84■□□□□ 0.13
ACTN1-211ENST00000553882 PPIP5K2O43314 1243 aa15.83■□□□□ 0.13
ACTN1-211ENST00000553882 EXOC3O60645 756 aa15.83■□□□□ 0.13
ACTN1-211ENST00000553882 GUCY1A3Q02108 690 aa15.83■□□□□ 0.13
ACTN1-211ENST00000553882 PRPF4BQ13523 1007 aaKnown RBP15.83■□□□□ 0.13
ACTN1-211ENST00000553882 SLC15A2Q16348 729 aa15.83■□□□□ 0.13
ACTN1-211ENST00000553882 TBC1D10BQ4KMP7 808 aaPredicted RBP15.83■□□□□ 0.13
ACTN1-211ENST00000553882 GLIS2Q9BZE0 524 aaPredicted RBP15.83■□□□□ 0.13
ACTN1-211ENST00000553882 PCIF1Q9H4Z3 704 aa15.83■□□□□ 0.13
ACTN1-211ENST00000553882 GOPCQ9HD26 462 aa15.83■□□□□ 0.13
ACTN1-211ENST00000553882 IPO5O00410 1097 aaKnown RBP15.83■□□□□ 0.12
ACTN1-211ENST00000553882 CES2O00748 559 aa15.83■□□□□ 0.12
ACTN1-211ENST00000553882 MREGQ8N565 214 aa15.83■□□□□ 0.12
ACTN1-211ENST00000553882 LMBR1Q8WVP7 490 aa15.83■□□□□ 0.12
ACTN1-211ENST00000553882 RNPC3Q96LT9 517 aaKnown RBP15.83■□□□□ 0.12
ACTN1-211ENST00000553882 NACC1Q96RE7 527 aa15.83■□□□□ 0.12
ACTN1-211ENST00000553882 STK33Q9BYT3 514 aa15.83■□□□□ 0.12
ACTN1-211ENST00000553882 GPR88Q9GZN0 384 aa15.83■□□□□ 0.12
ACTN1-211ENST00000553882 INTS2Q9H0H0 1204 aaKnown RBP15.83■□□□□ 0.12
ACTN1-211ENST00000553882 PPP1R9AQ9ULJ8 1098 aa15.83■□□□□ 0.12
ACTN1-211ENST00000553882 TMX2Q9Y320 296 aa15.83■□□□□ 0.12
ACTN1-211ENST00000553882 TTI1O43156 1089 aa15.82■□□□□ 0.12
ACTN1-211ENST00000553882 HIP1RO75146 1068 aa15.82■□□□□ 0.12
ACTN1-211ENST00000553882 FLT3P36888 993 aa15.82■□□□□ 0.12
ACTN1-211ENST00000553882 MYL7Q01449 175 aa15.82■□□□□ 0.12
ACTN1-211ENST00000553882 SLFN11Q7Z7L1 901 aa15.82■□□□□ 0.12
ACTN1-211ENST00000553882 VEZTQ9HBM0 779 aa15.82■□□□□ 0.12
ACTN1-211ENST00000553882 TMOD2Q9NZR1 351 aa15.82■□□□□ 0.12
ACTN1-211ENST00000553882 APEX2Q9UBZ4 518 aa15.82■□□□□ 0.12
ACTN1-211ENST00000553882 ZBTB21Q9ULJ3 1066 aa15.82■□□□□ 0.12
ACTN1-211ENST00000553882 NR2E1Q9Y466 385 aa15.82■□□□□ 0.12
ACTN1-211ENST00000553882 ARHGEF35A5YM69 484 aa15.82■□□□□ 0.12
ACTN1-211ENST00000553882 DAPK3O43293 454 aa15.82■□□□□ 0.12
ACTN1-211ENST00000553882 RAD17O75943 681 aa15.82■□□□□ 0.12
ACTN1-211ENST00000553882 FGGP02679 453 aa15.82■□□□□ 0.12
ACTN1-211ENST00000553882 HPDP32754 393 aaPredicted RBP15.82■□□□□ 0.12
ACTN1-211ENST00000553882 COPB2P35606 906 aa15.82■□□□□ 0.12
ACTN1-211ENST00000553882 HSD17B3P37058 310 aa15.82■□□□□ 0.12
ACTN1-211ENST00000553882 ZNF131P52739 623 aa15.82■□□□□ 0.12
ACTN1-211ENST00000553882 DLG4P78352 724 aa15.82■□□□□ 0.12
ACTN1-211ENST00000553882 PHLDB3Q6NSJ2 640 aa15.82■□□□□ 0.12
ACTN1-211ENST00000553882 SLC30A5Q8TAD4 765 aa15.82■□□□□ 0.12
ACTN1-211ENST00000553882 ARHGEF26Q96DR7 871 aa15.82■□□□□ 0.12
ACTN1-211ENST00000553882 TRIM31Q9BZY9 425 aa15.82■□□□□ 0.12
ACTN1-211ENST00000553882 SUCLA2Q9P2R7 463 aaPredicted RBP15.82■□□□□ 0.12
ACTN1-211ENST00000553882 HERC5Q9UII4 1024 aaKnown RBP15.82■□□□□ 0.12
ACTN1-211ENST00000553882 SCAF8Q9UPN6 1271 aaKnown RBP15.82■□□□□ 0.12
ACTN1-211ENST00000553882 STXBP5LQ9Y2K9 1186 aa15.82■□□□□ 0.12
ACTN1-211ENST00000553882 K7ENM7 598 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 VIL1P09327 827 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms