RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 NCAPHQ15003 741 aa12.99□□□□□ -0.33
NEK9-202ENST00000553823 LRRC41Q15345 812 aa12.99□□□□□ -0.33
NEK9-202ENST00000553823 GNASQ5JWF2 1037 aa12.99□□□□□ -0.33
NEK9-202ENST00000553823 L1TD1Q5T7N2 865 aaKnown RBP12.99□□□□□ -0.33
NEK9-202ENST00000553823 GLIS3Q8NEA6 775 aa12.99□□□□□ -0.33
NEK9-202ENST00000553823 ENOX1Q8TC92 643 aaKnown RBP12.99□□□□□ -0.33
NEK9-202ENST00000553823 KAT2BQ92831 832 aa12.99□□□□□ -0.33
NEK9-202ENST00000553823 FGFBP2Q9BYJ0 223 aa12.99□□□□□ -0.33
NEK9-202ENST00000553823 C17orf75Q9HAS0 396 aa12.99□□□□□ -0.33
NEK9-202ENST00000553823 HMX1Q9NP08 348 aaPredicted RBP12.99□□□□□ -0.33
NEK9-202ENST00000553823 XPNPEP3Q9NQH7 507 aa12.99□□□□□ -0.33
NEK9-202ENST00000553823 DDX20Q9UHI6 824 aaKnown RBP12.99□□□□□ -0.33
NEK9-202ENST00000553823 RWDD2AQ9UIY3 292 aa12.99□□□□□ -0.33
NEK9-202ENST00000553823 PTPN22Q9Y2R2 807 aa12.99□□□□□ -0.33
NEK9-202ENST00000553823 BICDL2A1A5D9 508 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 MYADML2A6NDP7 307 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 EIF3DO15371 548 aaKnown RBP eCLIP12.98□□□□□ -0.33
NEK9-202ENST00000553823 MAGEB2O15479 319 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 MSCO60682 206 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 ADAMTS4O75173 837 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 GCNT3O95395 438 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 PGK1P00558 417 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 CCNE1P24864 410 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 NMT1P30419 496 aaKnown RBP12.98□□□□□ -0.33
NEK9-202ENST00000553823 PSEN2P49810 448 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 PEX3P56589 373 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 SOX10P56693 466 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 STX17P56962 302 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 TPM4P67936 248 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 PURAQ00577 322 aaKnown RBP12.98□□□□□ -0.33
NEK9-202ENST00000553823 PPFIA1Q13136 1202 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 DMP1Q13316 513 aaPredicted RBP12.98□□□□□ -0.33
NEK9-202ENST00000553823 MFSD10Q14728 455 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 KIAA0753Q2KHM9 967 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 STXBP4Q6ZWJ1 553 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 EPM2AIP1Q7L775 607 aaPredicted RBP12.98□□□□□ -0.33
NEK9-202ENST00000553823 ZNF720Q7Z2F6 126 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 SLC17A8Q8NDX2 589 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 SCFD1Q8WVM8 642 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 TCP11Q8WWU5 503 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 P2RX5Q93086 422 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 TMEM143Q96AN5 459 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 IFT74Q96LB3 600 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 MED15Q96RN5 788 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 FIZ1Q96SL8 496 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 KATNAL1Q9BW62 490 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 POLR3FQ9H1D9 316 aaPredicted RBP12.98□□□□□ -0.33
NEK9-202ENST00000553823 KCNG1Q9UIX4 513 aa12.98□□□□□ -0.33
NEK9-202ENST00000553823 UBE4BO95155 1302 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 IGKV6-21A0A0C4DH24 114 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 RRN3P2A6NIE6 340 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 K7ENM7 598 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 HAS3O00219 553 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 MYBP10242 640 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 CST5P28325 142 aaPredicted RBP12.97□□□□□ -0.33
NEK9-202ENST00000553823 ARL2P36404 184 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 CASP5P51878 434 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 SMTNP53814 917 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 IGBP1P78318 339 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 ALCAMQ13740 583 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 GRIK4Q16099 956 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 SPATA1Q5VX52 437 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 IER5Q5VY09 327 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 CENPPQ6IPU0 288 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 RETREG2Q8NC44 543 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 KLHDC9Q8NEP7 349 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 ZNF507Q8TCN5 953 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 TRAPPC12Q8WVT3 735 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 SPIRE2Q8WWL2 714 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 BSNDQ8WZ55 320 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 MTG1Q9BT17 334 aaPredicted RBP12.97□□□□□ -0.33
NEK9-202ENST00000553823 SUGCTQ9HAC7 445 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 NFE2L3Q9Y4A8 694 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 PCDHB13Q9Y5F0 798 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 FRMPD3Q5JV73 1810 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 HTTP42858 3142 aa12.97□□□□□ -0.33
NEK9-202ENST00000553823 NRCAMQ92823 1304 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 TRIM49BA6NDI0 452 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 CCDC169A6NNP5 214 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 PPP1R37O75864 691 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 PRPF6O94906 941 aaKnown RBP12.96□□□□□ -0.33
NEK9-202ENST00000553823 C22orf31O95567 290 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 SMIM10L2AP0DMW4 78 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 SMIM10L2BP0DMW5 78 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 HSPA8P11142 646 aaKnown RBP12.96□□□□□ -0.33
NEK9-202ENST00000553823 KLRC1P26715 233 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 NPTX2P47972 431 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 DNM2P50570 870 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 PMS1P54277 932 aaKnown RBP12.96□□□□□ -0.33
NEK9-202ENST00000553823 NCKAP1LP55160 1127 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 CHMP4BP1P59074 171 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 PPP2R5AQ15172 486 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 TPD52L1Q16890 204 aaPredicted RBP12.96□□□□□ -0.33
NEK9-202ENST00000553823 BMT2Q1RMZ1 405 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 EFCAB12Q6NXP0 572 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 TTI2Q6NXR4 508 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 FOXR2Q6PJQ5 311 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 HAUS6Q7Z4H7 955 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 RNF180Q86T96 592 aa12.96□□□□□ -0.33
NEK9-202ENST00000553823 NELFCDQ8IXH7 590 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms