RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 SAMM50Q9Y512 469 aa16.82■□□□□ 0.28
ABCD4-218ENST00000553486 MRFAP1Q9Y605 127 aa16.82■□□□□ 0.28
ABCD4-218ENST00000553486 CTAGE9A4FU28 777 aa16.82■□□□□ 0.28
ABCD4-218ENST00000553486 SLC16A3O15427 465 aaKnown RBP16.82■□□□□ 0.28
ABCD4-218ENST00000553486 NR3C1P04150 777 aa16.82■□□□□ 0.28
ABCD4-218ENST00000553486 ELNP15502 786 aa16.82■□□□□ 0.28
ABCD4-218ENST00000553486 ITGB3BPQ13352 177 aaPredicted RBP16.82■□□□□ 0.28
ABCD4-218ENST00000553486 BAATQ14032 418 aaPredicted RBP16.82■□□□□ 0.28
ABCD4-218ENST00000553486 NFIL3Q16649 462 aa16.82■□□□□ 0.28
ABCD4-218ENST00000553486 SH3D19Q5HYK7 790 aa16.82■□□□□ 0.28
ABCD4-218ENST00000553486 SNRNP48Q6IEG0 339 aaKnown RBP16.82■□□□□ 0.28
ABCD4-218ENST00000553486 RRAGAQ7L523 313 aa16.82■□□□□ 0.28
ABCD4-218ENST00000553486 UNC93B1Q9H1C4 597 aa16.82■□□□□ 0.28
ABCD4-218ENST00000553486 CEP72Q9P209 647 aa16.82■□□□□ 0.28
ABCD4-218ENST00000553486 DBR1Q9UK59 544 aaKnown RBP16.82■□□□□ 0.28
ABCD4-218ENST00000553486 H0YGN5 161 aa16.81■□□□□ 0.28
ABCD4-218ENST00000553486 ATP2A1O14983 1001 aa16.81■□□□□ 0.28
ABCD4-218ENST00000553486 EPHB6O15197 1021 aa16.81■□□□□ 0.28
ABCD4-218ENST00000553486 LYPLA2O95372 231 aa16.81■□□□□ 0.28
ABCD4-218ENST00000553486 EPB41P11171 864 aaKnown RBP16.81■□□□□ 0.28
ABCD4-218ENST00000553486 CCND2P30279 289 aa16.81■□□□□ 0.28
ABCD4-218ENST00000553486 QARSP47897 775 aaKnown RBP16.81■□□□□ 0.28
ABCD4-218ENST00000553486 GCLCP48506 637 aaPredicted RBP16.81■□□□□ 0.28
ABCD4-218ENST00000553486 KCNH2Q12809 1159 aa16.81■□□□□ 0.28
ABCD4-218ENST00000553486 SPA17Q15506 151 aa16.81■□□□□ 0.28
ABCD4-218ENST00000553486 PDXDC1Q6P996 788 aa16.81■□□□□ 0.28
ABCD4-218ENST00000553486 ZNF720Q7Z2F6 126 aa16.81■□□□□ 0.28
ABCD4-218ENST00000553486 FAM178BQ8IXR5 827 aa16.81■□□□□ 0.28
ABCD4-218ENST00000553486 SLC35F6Q8N357 371 aa16.81■□□□□ 0.28
ABCD4-218ENST00000553486 U2AF1L4Q8WU68 220 aaKnown RBP16.81■□□□□ 0.28
ABCD4-218ENST00000553486 BAP1Q92560 729 aa16.81■□□□□ 0.28
ABCD4-218ENST00000553486 LSM14BQ9BX40 385 aaKnown RBP16.81■□□□□ 0.28
ABCD4-218ENST00000553486 CARD6Q9BX69 1037 aa16.81■□□□□ 0.28
ABCD4-218ENST00000553486 POLD4Q9HCU8 107 aa16.81■□□□□ 0.28
ABCD4-218ENST00000553486 HOXC10Q9NYD6 342 aa16.81■□□□□ 0.28
ABCD4-218ENST00000553486 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.81■□□□□ 0.28
ABCD4-218ENST00000553486 RIPK3Q9Y572 518 aa16.81■□□□□ 0.28
ABCD4-218ENST00000553486 PCDHB13Q9Y5F0 798 aa16.81■□□□□ 0.28
ABCD4-218ENST00000553486 V9GYY5 206 aaPredicted RBP16.81■□□□□ 0.28
ABCD4-218ENST00000553486 ASTN1O14525 1302 aa16.81■□□□□ 0.28
ABCD4-218ENST00000553486 LRRC53A6NM62 1247 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 EFCAB8A8MWE9 144 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 KRT86O43790 486 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 INHAP05111 366 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 NMT1P30419 496 aaKnown RBP16.8■□□□□ 0.28
ABCD4-218ENST00000553486 SFNP31947 248 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 JAK3P52333 1124 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 HERVK_113P62684 666 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 PADI6Q6TGC4 694 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 NLRX1Q86UT6 975 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 CCDC155Q8N6L0 562 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 EHBP1Q8NDI1 1231 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 SYN2Q92777 582 aaPredicted RBP16.8■□□□□ 0.28
ABCD4-218ENST00000553486 NAPGQ99747 312 aaPredicted RBP16.8■□□□□ 0.28
ABCD4-218ENST00000553486 ASCC2Q9H1I8 757 aaPredicted RBP16.8■□□□□ 0.28
ABCD4-218ENST00000553486 COLQQ9Y215 455 aaPredicted RBP16.8■□□□□ 0.28
ABCD4-218ENST00000553486 LOC285556D6RIA3 1793 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 MGAMO43451 1857 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 MAFGO15525 162 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 AFPP02771 609 aaKnown RBP16.8■□□□□ 0.28
ABCD4-218ENST00000553486 KRT76Q01546 638 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 ELF2Q15723 593 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 ODR4Q5SWX8 454 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 CCDC122Q5T0U0 273 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 VSIG10LQ86VR7 867 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 UBXN4Q92575 508 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 JAKMIP2Q96AA8 810 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 TEX13BQ9BXU2 312 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 TSGA10Q9BZW7 698 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 DEF6Q9H4E7 631 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 ZNF214Q9UL59 606 aaPredicted RBP16.8■□□□□ 0.28
ABCD4-218ENST00000553486 GUCA1BQ9UMX6 200 aa16.8■□□□□ 0.28
ABCD4-218ENST00000553486 LAMA3Q16787 3333 aa16.79■□□□□ 0.28
ABCD4-218ENST00000553486 HIP1RO75146 1068 aa16.79■□□□□ 0.28
ABCD4-218ENST00000553486 XRCC5P13010 732 aaKnown RBP16.79■□□□□ 0.28
ABCD4-218ENST00000553486 TMEM132BQ14DG7 1078 aa16.79■□□□□ 0.28
ABCD4-218ENST00000553486 HS2ST1Q7LGA3 356 aa16.79■□□□□ 0.28
ABCD4-218ENST00000553486 RDM1Q8NG50 284 aa16.79■□□□□ 0.28
ABCD4-218ENST00000553486 NSUN6Q8TEA1 469 aaKnown RBP16.79■□□□□ 0.28
ABCD4-218ENST00000553486 GPRASP2Q96D09 838 aa16.79■□□□□ 0.28
ABCD4-218ENST00000553486 BCAS3Q9H6U6 928 aa16.79■□□□□ 0.28
ABCD4-218ENST00000553486 KIAA1217Q5T5P2 1943 aa16.78■□□□□ 0.28
ABCD4-218ENST00000553486 WDR64B1ANS9 1081 aa16.78■□□□□ 0.28
ABCD4-218ENST00000553486 CLIC2O15247 247 aa16.78■□□□□ 0.28
ABCD4-218ENST00000553486 TGFB1I1O43294 461 aa16.78■□□□□ 0.28
ABCD4-218ENST00000553486 TADA3O75528 432 aa16.78■□□□□ 0.28
ABCD4-218ENST00000553486 AKAP3O75969 853 aa16.78■□□□□ 0.28
ABCD4-218ENST00000553486 SGPL1O95470 568 aa16.78■□□□□ 0.28
ABCD4-218ENST00000553486 ABL1P00519 1130 aa16.78■□□□□ 0.28
ABCD4-218ENST00000553486 NR3C2P08235 984 aa16.78■□□□□ 0.28
ABCD4-218ENST00000553486 MAPTP10636 758 aaKnown RBP16.78■□□□□ 0.28
ABCD4-218ENST00000553486 EIF4A3P38919 411 aaKnown RBP16.78■□□□□ 0.28
ABCD4-218ENST00000553486 ALCAMQ13740 583 aa16.78■□□□□ 0.28
ABCD4-218ENST00000553486 ERCC6LQ2NKX8 1250 aa16.78■□□□□ 0.28
ABCD4-218ENST00000553486 SFMBT2Q5VUG0 894 aa16.78■□□□□ 0.28
ABCD4-218ENST00000553486 C4orf19Q8IY42 314 aa16.78■□□□□ 0.28
ABCD4-218ENST00000553486 GOLGA5Q8TBA6 731 aa16.78■□□□□ 0.28
ABCD4-218ENST00000553486 DPF3Q92784 378 aa16.78■□□□□ 0.28
ABCD4-218ENST00000553486 CCDC43Q96MW1 224 aaKnown RBP16.78■□□□□ 0.28
ABCD4-218ENST00000553486 FIZ1Q96SL8 496 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms