RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 EMC2Q15006 297 aa9.24□□□□□ -0.93
PCNX1-204ENST00000553428 PCBP1Q15365 356 aaKnown RBP eCLIP9.24□□□□□ -0.93
PCNX1-204ENST00000553428 ARL6IP4Q66PJ3 421 aaKnown RBP9.24□□□□□ -0.93
PCNX1-204ENST00000553428 FAM117BQ6P1L5 589 aa9.24□□□□□ -0.93
PCNX1-204ENST00000553428 SLC24A5Q71RS6 500 aa9.24□□□□□ -0.93
PCNX1-204ENST00000553428 TMCO2Q7Z6W1 182 aaPredicted RBP9.24□□□□□ -0.93
PCNX1-204ENST00000553428 RTN4RL1Q86UN2 441 aaPredicted RBP9.24□□□□□ -0.93
PCNX1-204ENST00000553428 FAM228AQ86W67 206 aa9.24□□□□□ -0.93
PCNX1-204ENST00000553428 CATSPER3Q86XQ3 398 aa9.24□□□□□ -0.93
PCNX1-204ENST00000553428 CRIPAKQ8N1N5 446 aa9.24□□□□□ -0.93
PCNX1-204ENST00000553428 KCTD17Q8N5Z5 321 aa9.24□□□□□ -0.93
PCNX1-204ENST00000553428 MAFAQ8NHW3 353 aaPredicted RBP9.24□□□□□ -0.93
PCNX1-204ENST00000553428 LINC01599Q8WXQ3 324 aa9.24□□□□□ -0.93
PCNX1-204ENST00000553428 RSPH1Q8WYR4 309 aa9.24□□□□□ -0.93
PCNX1-204ENST00000553428 ZNF689Q96CS4 500 aaPredicted RBP9.24□□□□□ -0.93
PCNX1-204ENST00000553428 NACC1Q96RE7 527 aa9.24□□□□□ -0.93
PCNX1-204ENST00000553428 PPP1R16BQ96T49 567 aa9.24□□□□□ -0.93
PCNX1-204ENST00000553428 MTRQ99707 1265 aa9.24□□□□□ -0.93
PCNX1-204ENST00000553428 TMX1Q9H3N1 280 aa9.24□□□□□ -0.93
PCNX1-204ENST00000553428 PRDM12Q9H4Q4 367 aa9.24□□□□□ -0.93
PCNX1-204ENST00000553428 ELAC1Q9H777 363 aaKnown RBP9.24□□□□□ -0.93
PCNX1-204ENST00000553428 ATP6V0A4Q9HBG4 840 aa9.24□□□□□ -0.93
PCNX1-204ENST00000553428 CHST12Q9NRB3 414 aa9.24□□□□□ -0.93
PCNX1-204ENST00000553428 RGS18Q9NS28 235 aa9.24□□□□□ -0.93
PCNX1-204ENST00000553428 LMCD1Q9NZU5 365 aa9.24□□□□□ -0.93
PCNX1-204ENST00000553428 DBR1Q9UK59 544 aaKnown RBP9.24□□□□□ -0.93
PCNX1-204ENST00000553428 RWDD3Q9Y3V2 267 aa9.24□□□□□ -0.93
PCNX1-204ENST00000553428 PCDHB6Q9Y5E3 794 aa9.24□□□□□ -0.93
PCNX1-204ENST00000553428 A0A087WZ62 844 aa9.23□□□□□ -0.93
PCNX1-204ENST00000553428 LCHNA4D1U4 455 aa9.23□□□□□ -0.93
PCNX1-204ENST00000553428 C9IYK1 514 aa9.23□□□□□ -0.93
PCNX1-204ENST00000553428 HOXA2O43364 376 aa9.23□□□□□ -0.93
PCNX1-204ENST00000553428 GTPBP6O43824 516 aaPredicted RBP9.23□□□□□ -0.93
PCNX1-204ENST00000553428 DGKIO75912 1065 aa9.23□□□□□ -0.93
PCNX1-204ENST00000553428 UPP2O95045 317 aa9.23□□□□□ -0.93
PCNX1-204ENST00000553428 FAM189BP81408 668 aa9.23□□□□□ -0.93
PCNX1-204ENST00000553428 ATP2C1P98194 919 aaPredicted RBP9.23□□□□□ -0.93
PCNX1-204ENST00000553428 DRP2Q13474 957 aa9.23□□□□□ -0.93
PCNX1-204ENST00000553428 TFDP1Q14186 410 aa9.23□□□□□ -0.93
PCNX1-204ENST00000553428 DTHD1Q6ZMT9 781 aa9.23□□□□□ -0.93
PCNX1-204ENST00000553428 SRGAP1Q7Z6B7 1085 aa9.23□□□□□ -0.93
PCNX1-204ENST00000553428 FERMT3Q86UX7 667 aa9.23□□□□□ -0.93
PCNX1-204ENST00000553428 RHPN2Q8IUC4 686 aa9.23□□□□□ -0.93
PCNX1-204ENST00000553428 CMTR2Q8IYT2 770 aaKnown RBP9.23□□□□□ -0.93
PCNX1-204ENST00000553428 IGSF22Q8N9C0 903 aa9.23□□□□□ -0.93
PCNX1-204ENST00000553428 ADAM2Q99965 735 aa9.23□□□□□ -0.93
PCNX1-204ENST00000553428 SH2D3AQ9BRG2 576 aa9.23□□□□□ -0.93
PCNX1-204ENST00000553428 FDXACB1Q9BRP7 624 aaPredicted RBP9.23□□□□□ -0.93
PCNX1-204ENST00000553428 TRAIPQ9BWF2 469 aa9.23□□□□□ -0.93
PCNX1-204ENST00000553428 RC3H2Q9HBD1 1191 aaKnown RBP9.23□□□□□ -0.93
PCNX1-204ENST00000553428 TMEM161AQ9NX61 479 aa9.23□□□□□ -0.93
PCNX1-204ENST00000553428 DACT1Q9NYF0 836 aa9.23□□□□□ -0.93
PCNX1-204ENST00000553428 DAXXQ9UER7 740 aaPredicted RBP9.23□□□□□ -0.93
PCNX1-204ENST00000553428 LRWD1Q9UFC0 647 aa9.23□□□□□ -0.93
PCNX1-204ENST00000553428 LRFN2Q9ULH4 789 aa9.23□□□□□ -0.93
PCNX1-204ENST00000553428 PCDHB7Q9Y5E2 793 aa9.23□□□□□ -0.93
PCNX1-204ENST00000553428 COL4A3BPQ9Y5P4 624 aa9.23□□□□□ -0.93
PCNX1-204ENST00000553428 ADGRA3Q8IWK6 1321 aa9.23□□□□□ -0.93
PCNX1-204ENST00000553428 MYH9P35579 1960 aaKnown RBP9.23□□□□□ -0.93
PCNX1-204ENST00000553428 C5orf67F2Z3F1 127 aa9.22□□□□□ -0.93
PCNX1-204ENST00000553428 SLC26A4O43511 780 aa9.22□□□□□ -0.93
PCNX1-204ENST00000553428 MGEA5O60502 916 aa9.22□□□□□ -0.93
PCNX1-204ENST00000553428 MED24O75448 989 aa9.22□□□□□ -0.93
PCNX1-204ENST00000553428 ARHGEF15O94989 841 aa9.22□□□□□ -0.93
PCNX1-204ENST00000553428 RB1P06400 928 aa9.22□□□□□ -0.93
PCNX1-204ENST00000553428 SKIP12755 728 aa9.22□□□□□ -0.93
PCNX1-204ENST00000553428 CCT6AP40227 531 aaKnown RBP9.22□□□□□ -0.93
PCNX1-204ENST00000553428 LAMTOR4Q0VGL1 99 aa9.22□□□□□ -0.93
PCNX1-204ENST00000553428 NBR1Q14596 966 aa9.22□□□□□ -0.93
PCNX1-204ENST00000553428 KRT79Q5XKE5 535 aa9.22□□□□□ -0.93
PCNX1-204ENST00000553428 IFNLR1Q8IU57 520 aaPredicted RBP9.22□□□□□ -0.93
PCNX1-204ENST00000553428 HSCBQ8IWL3 235 aa9.22□□□□□ -0.93
PCNX1-204ENST00000553428 FIBCD1Q8N539 461 aa9.22□□□□□ -0.93
PCNX1-204ENST00000553428 ZNF579Q8NAF0 562 aaKnown RBP9.22□□□□□ -0.93
PCNX1-204ENST00000553428 MCPH1Q8NEM0 835 aa9.22□□□□□ -0.93
PCNX1-204ENST00000553428 FBXO22Q8NEZ5 403 aa9.22□□□□□ -0.93
PCNX1-204ENST00000553428 PRPF31Q8WWY3 499 aaKnown RBP9.22□□□□□ -0.93
PCNX1-204ENST00000553428 ARNTL2Q8WYA1 636 aa9.22□□□□□ -0.93
PCNX1-204ENST00000553428 TMEM143Q96AN5 459 aa9.22□□□□□ -0.93
PCNX1-204ENST00000553428 NLRP4Q96MN2 994 aa9.22□□□□□ -0.93
PCNX1-204ENST00000553428 PLVAPQ9BX97 442 aa9.22□□□□□ -0.93
PCNX1-204ENST00000553428 NFKBIZQ9BYH8 718 aa9.22□□□□□ -0.93
PCNX1-204ENST00000553428 IFT122Q9HBG6 1241 aa9.22□□□□□ -0.93
PCNX1-204ENST00000553428 XPNPEP1Q9NQW7 623 aa9.22□□□□□ -0.93
PCNX1-204ENST00000553428 RANBP2P49792 3224 aaKnown RBP9.22□□□□□ -0.93
PCNX1-204ENST00000553428 DNAH12Q6ZR08 3092 aa9.21□□□□□ -0.93
PCNX1-204ENST00000553428 MICAL3Q7RTP6 2002 aa9.21□□□□□ -0.93
PCNX1-204ENST00000553428 A0A0U1RQF3 1178 aa9.21□□□□□ -0.94
PCNX1-204ENST00000553428 VPS37CA5D8V6 355 aaPredicted RBP9.21□□□□□ -0.94
PCNX1-204ENST00000553428 ARHGEF35A5YM69 484 aa9.21□□□□□ -0.94
PCNX1-204ENST00000553428 ZBTB39O15060 712 aa9.21□□□□□ -0.94
PCNX1-204ENST00000553428 EOMESO95936 686 aa9.21□□□□□ -0.94
PCNX1-204ENST00000553428 CYP11B2P19099 503 aa9.21□□□□□ -0.94
PCNX1-204ENST00000553428 SYT1P21579 422 aa9.21□□□□□ -0.94
PCNX1-204ENST00000553428 IGFBP4P22692 258 aa9.21□□□□□ -0.94
PCNX1-204ENST00000553428 ARL2P36404 184 aa9.21□□□□□ -0.94
PCNX1-204ENST00000553428 PHKA2P46019 1235 aa9.21□□□□□ -0.94
PCNX1-204ENST00000553428 RAB27AP51159 221 aa9.21□□□□□ -0.94
PCNX1-204ENST00000553428 BTG3Q14201 252 aaPredicted RBP9.21□□□□□ -0.94
PCNX1-204ENST00000553428 ADGRE1Q14246 886 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms