RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 OR10A2Q9H208 303 aa6.78□□□□□ -1.32
ATXN3-217ENST00000553287 CD248Q9HCU0 757 aa6.78□□□□□ -1.32
ATXN3-217ENST00000553287 THG1LQ9NWX6 298 aaKnown RBP6.78□□□□□ -1.32
ATXN3-217ENST00000553287 SAE1Q9UBE0 346 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-217ENST00000553287 TBX22Q9Y458 520 aa6.78□□□□□ -1.32
ATXN3-217ENST00000553287 TLDC2A0PJX2 215 aa6.77□□□□□ -1.33
ATXN3-217ENST00000553287 PATE3B3GLJ2 98 aa6.77□□□□□ -1.33
ATXN3-217ENST00000553287 ENPP3O14638 875 aa6.77□□□□□ -1.33
ATXN3-217ENST00000553287 FOXS1O43638 330 aa6.77□□□□□ -1.33
ATXN3-217ENST00000553287 MAFO75444 373 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-217ENST00000553287 ZNF20P17024 532 aa6.77□□□□□ -1.33
ATXN3-217ENST00000553287 ANTXR2P58335 489 aa6.77□□□□□ -1.33
ATXN3-217ENST00000553287 DSG1Q02413 1049 aa6.77□□□□□ -1.33
ATXN3-217ENST00000553287 NFYCQ13952 458 aa6.77□□□□□ -1.33
ATXN3-217ENST00000553287 SART3Q15020 963 aaKnown RBP6.77□□□□□ -1.33
ATXN3-217ENST00000553287 ZXDCQ2QGD7 858 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-217ENST00000553287 PRAMEF9Q5VWM5 478 aa6.77□□□□□ -1.33
ATXN3-217ENST00000553287 PASD1Q8IV76 773 aa6.77□□□□□ -1.33
ATXN3-217ENST00000553287 BCL6BQ8N143 479 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-217ENST00000553287 PPM1KQ8N3J5 372 aa6.77□□□□□ -1.33
ATXN3-217ENST00000553287 Q8TCH9 128 aa6.77□□□□□ -1.33
ATXN3-217ENST00000553287 DVL3Q92997 716 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-217ENST00000553287 C1QTNF3Q9BXJ4 246 aa6.77□□□□□ -1.33
ATXN3-217ENST00000553287 KRTAP9-3Q9BYQ3 159 aa6.77□□□□□ -1.33
ATXN3-217ENST00000553287 PUF60Q9UHX1 559 aaKnown RBP6.77□□□□□ -1.33
ATXN3-217ENST00000553287 OAZ3Q9UMX2 235 aa6.77□□□□□ -1.33
ATXN3-217ENST00000553287 ZFR2Q9UPR6 939 aaKnown RBP6.77□□□□□ -1.33
ATXN3-217ENST00000553287 GAPVD1Q14C86 1478 aa6.77□□□□□ -1.33
ATXN3-217ENST00000553287 CDC14BO60729 498 aa6.76□□□□□ -1.33
ATXN3-217ENST00000553287 TIGD7Q6NT04 549 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-217ENST00000553287 ESRP1Q6NXG1 681 aaKnown RBP6.76□□□□□ -1.33
ATXN3-217ENST00000553287 ZNF585AQ6P3V2 769 aa6.76□□□□□ -1.33
ATXN3-217ENST00000553287 GGNQ86UU5 652 aa6.76□□□□□ -1.33
ATXN3-217ENST00000553287 ZZZ3Q8IYH5 903 aa6.76□□□□□ -1.33
ATXN3-217ENST00000553287 RTF1Q92541 710 aaKnown RBP6.76□□□□□ -1.33
ATXN3-217ENST00000553287 WWC2-AS2Q96NR7 200 aa6.76□□□□□ -1.33
ATXN3-217ENST00000553287 DPYSL5Q9BPU6 564 aa6.76□□□□□ -1.33
ATXN3-217ENST00000553287 KRTAP3-1Q9BYR8 98 aa6.76□□□□□ -1.33
ATXN3-217ENST00000553287 KLC2Q9H0B6 622 aa6.76□□□□□ -1.33
ATXN3-217ENST00000553287 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.76□□□□□ -1.33
ATXN3-217ENST00000553287 SYNJ1O43426 1573 aa6.75□□□□□ -1.33
ATXN3-217ENST00000553287 MATN2O00339 956 aa6.75□□□□□ -1.33
ATXN3-217ENST00000553287 APOL3O95236 402 aa6.75□□□□□ -1.33
ATXN3-217ENST00000553287 MYCLP1P12525 358 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-217ENST00000553287 KPNA1P52294 538 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-217ENST00000553287 GYS2P54840 703 aa6.75□□□□□ -1.33
ATXN3-217ENST00000553287 ADAM15Q13444 863 aa6.75□□□□□ -1.33
ATXN3-217ENST00000553287 DGKDQ16760 1214 aa6.75□□□□□ -1.33
ATXN3-217ENST00000553287 GIMAP6Q6P9H5 292 aa6.75□□□□□ -1.33
ATXN3-217ENST00000553287 PHYKPLQ8IUZ5 450 aa6.75□□□□□ -1.33
ATXN3-217ENST00000553287 EFHBQ8N7U6 833 aa6.75□□□□□ -1.33
ATXN3-217ENST00000553287 OR14K1Q8NGZ2 314 aa6.75□□□□□ -1.33
ATXN3-217ENST00000553287 LEO1Q8WVC0 666 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-217ENST00000553287 GPR101Q96P66 508 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-217ENST00000553287 KCMF1Q9P0J7 381 aa6.75□□□□□ -1.33
ATXN3-217ENST00000553287 DENND2AQ9ULE3 1009 aa6.75□□□□□ -1.33
ATXN3-217ENST00000553287 VWA7Q9Y334 891 aa6.75□□□□□ -1.33
ATXN3-217ENST00000553287 SOGA1O94964 1423 aa6.75□□□□□ -1.33
ATXN3-217ENST00000553287 PRPF6O94906 941 aaKnown RBP6.74□□□□□ -1.33
ATXN3-217ENST00000553287 BCAR1P56945 870 aa6.74□□□□□ -1.33
ATXN3-217ENST00000553287 SMAD3P84022 425 aaKnown RBP6.74□□□□□ -1.33
ATXN3-217ENST00000553287 ADCY2Q08462 1091 aa6.74□□□□□ -1.33
ATXN3-217ENST00000553287 MYBPC3Q14896 1274 aa6.74□□□□□ -1.33
ATXN3-217ENST00000553287 SEPT7Q16181 437 aaKnown RBP6.74□□□□□ -1.33
ATXN3-217ENST00000553287 PLEKHG4Q58EX7 1191 aa6.74□□□□□ -1.33
ATXN3-217ENST00000553287 LCE5AQ5TCM9 118 aa6.74□□□□□ -1.33
ATXN3-217ENST00000553287 KLHDC10Q6PID8 442 aa6.74□□□□□ -1.33
ATXN3-217ENST00000553287 SMC1BQ8NDV3 1235 aa6.74□□□□□ -1.33
ATXN3-217ENST00000553287 CFHR4Q92496 578 aa6.74□□□□□ -1.33
ATXN3-217ENST00000553287 RPGRQ92834 1020 aaKnown RBP6.74□□□□□ -1.33
ATXN3-217ENST00000553287 BORCS6Q96GS4 357 aa6.74□□□□□ -1.33
ATXN3-217ENST00000553287 MYL10Q9BUA6 226 aa6.74□□□□□ -1.33
ATXN3-217ENST00000553287 TCAF1Q9Y4C2 921 aa6.74□□□□□ -1.33
ATXN3-217ENST00000553287 KIF13AQ9H1H9 1805 aa6.73□□□□□ -1.33
ATXN3-217ENST00000553287 A0A087X0B3 334 aa6.73□□□□□ -1.33
ATXN3-217ENST00000553287 TGM5O43548 720 aa6.73□□□□□ -1.33
ATXN3-217ENST00000553287 H2AFYO75367 372 aaKnown RBP6.73□□□□□ -1.33
ATXN3-217ENST00000553287 SESN2P58004 480 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-217ENST00000553287 HGFACQ04756 655 aa6.73□□□□□ -1.33
ATXN3-217ENST00000553287 LRRC32Q14392 662 aa6.73□□□□□ -1.33
ATXN3-217ENST00000553287 PUM1Q14671 1186 aaKnown RBP eCLIP6.73□□□□□ -1.33
ATXN3-217ENST00000553287 HS1BP3Q53T59 392 aa6.73□□□□□ -1.33
ATXN3-217ENST00000553287 UNQ6494/PRO21346Q6UXR6 183 aa6.73□□□□□ -1.33
ATXN3-217ENST00000553287 FUKQ8N0W3 1084 aa6.73□□□□□ -1.33
ATXN3-217ENST00000553287 C7orf31Q8N865 590 aa6.73□□□□□ -1.33
ATXN3-217ENST00000553287 OR5AN1Q8NGI8 311 aa6.73□□□□□ -1.33
ATXN3-217ENST00000553287 OR2W6PQ8NHA6 318 aa6.73□□□□□ -1.33
ATXN3-217ENST00000553287 PLA2G12BQ9BX93 195 aa6.73□□□□□ -1.33
ATXN3-217ENST00000553287 POFUT1Q9H488 388 aa6.73□□□□□ -1.33
ATXN3-217ENST00000553287 ZMAT4Q9H898 229 aa6.73□□□□□ -1.33
ATXN3-217ENST00000553287 SPTLC3Q9NUV7 552 aa6.73□□□□□ -1.33
ATXN3-217ENST00000553287 MYRFQ9Y2G1 1151 aa6.73□□□□□ -1.33
ATXN3-217ENST00000553287 CTDP1Q9Y5B0 961 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-217ENST00000553287 GSG1L2A8MUP6 293 aa6.72□□□□□ -1.33
ATXN3-217ENST00000553287 RAD17O75943 681 aa6.72□□□□□ -1.33
ATXN3-217ENST00000553287 CD40P25942 277 aa6.72□□□□□ -1.33
ATXN3-217ENST00000553287 ATP2C1P98194 919 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-217ENST00000553287 TAF7LQ5H9L4 462 aa6.72□□□□□ -1.33
ATXN3-217ENST00000553287 KANSL1Q7Z3B3 1105 aa6.72□□□□□ -1.33
ATXN3-217ENST00000553287 GFM2Q969S9 779 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms