RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 GRB10Q13322 594 aa20.99■□□□□ 0.95
HDAC4-217ENST00000553145 DSC3Q14574 896 aa20.99■□□□□ 0.95
HDAC4-217ENST00000553145 ODR4Q5SWX8 454 aa20.99■□□□□ 0.95
HDAC4-217ENST00000553145 OTUD6AQ7L8S5 288 aa20.99■□□□□ 0.95
HDAC4-217ENST00000553145 NPAS4Q8IUM7 802 aa20.99■□□□□ 0.95
HDAC4-217ENST00000553145 KSR1Q8IVT5 923 aa20.99■□□□□ 0.95
HDAC4-217ENST00000553145 ZNF710Q8N1W2 664 aa20.99■□□□□ 0.95
HDAC4-217ENST00000553145 GDPD5Q8WTR4 605 aa20.99■□□□□ 0.95
HDAC4-217ENST00000553145 SLC7A3Q8WY07 619 aa20.99■□□□□ 0.95
HDAC4-217ENST00000553145 TMEM143Q96AN5 459 aa20.99■□□□□ 0.95
HDAC4-217ENST00000553145 ZNF689Q96CS4 500 aaPredicted RBP20.99■□□□□ 0.95
HDAC4-217ENST00000553145 SCLT1Q96NL6 688 aa20.99■□□□□ 0.95
HDAC4-217ENST00000553145 ADAM2Q99965 735 aa20.99■□□□□ 0.95
HDAC4-217ENST00000553145 FDXACB1Q9BRP7 624 aaPredicted RBP20.99■□□□□ 0.95
HDAC4-217ENST00000553145 RGS18Q9NS28 235 aa20.99■□□□□ 0.95
HDAC4-217ENST00000553145 PPME1Q9Y570 386 aa20.99■□□□□ 0.95
HDAC4-217ENST00000553145 MED24O75448 989 aa20.98■□□□□ 0.95
HDAC4-217ENST00000553145 CSDE1O75534 798 aaKnown RBP20.98■□□□□ 0.95
HDAC4-217ENST00000553145 DGKIO75912 1065 aa20.98■□□□□ 0.95
HDAC4-217ENST00000553145 IBSPP21815 317 aaPredicted RBP20.98■□□□□ 0.95
HDAC4-217ENST00000553145 PTGDRQ13258 359 aa20.98■□□□□ 0.95
HDAC4-217ENST00000553145 EMC2Q15006 297 aa20.98■□□□□ 0.95
HDAC4-217ENST00000553145 CATSPER3Q86XQ3 398 aa20.98■□□□□ 0.95
HDAC4-217ENST00000553145 RHPN2Q8IUC4 686 aa20.98■□□□□ 0.95
HDAC4-217ENST00000553145 JPH2Q9BR39 696 aaPredicted RBP20.98■□□□□ 0.95
HDAC4-217ENST00000553145 XPNPEP1Q9NQW7 623 aa20.98■□□□□ 0.95
HDAC4-217ENST00000553145 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.98■□□□□ 0.95
HDAC4-217ENST00000553145 ADGRA3Q8IWK6 1321 aa20.98■□□□□ 0.95
HDAC4-217ENST00000553145 DENND3A2RUS2 1198 aa20.97■□□□□ 0.95
HDAC4-217ENST00000553145 C9IYK1 514 aa20.97■□□□□ 0.95
HDAC4-217ENST00000553145 LINC00271P0C7V0 271 aa20.97■□□□□ 0.95
HDAC4-217ENST00000553145 SARSP49591 514 aaKnown RBP20.97■□□□□ 0.95
HDAC4-217ENST00000553145 LARP1BQ659C4 914 aaKnown RBP20.97■□□□□ 0.95
HDAC4-217ENST00000553145 PIGOQ8TEQ8 1089 aa20.97■□□□□ 0.95
HDAC4-217ENST00000553145 PPM1EQ8WY54 764 aa20.97■□□□□ 0.95
HDAC4-217ENST00000553145 TUFT1Q9NNX1 390 aa20.97■□□□□ 0.95
HDAC4-217ENST00000553145 ANKEF1Q9NU02 776 aa20.97■□□□□ 0.95
HDAC4-217ENST00000553145 RARRES1P49788 294 aa20.96■□□□□ 0.95
HDAC4-217ENST00000553145 GATMP50440 423 aa20.96■□□□□ 0.95
HDAC4-217ENST00000553145 FXR2P51116 673 aaKnown RBP eCLIP20.96■□□□□ 0.95
HDAC4-217ENST00000553145 ZNF410Q86VK4 478 aa20.96■□□□□ 0.95
HDAC4-217ENST00000553145 PRPF31Q8WWY3 499 aaKnown RBP20.96■□□□□ 0.95
HDAC4-217ENST00000553145 NLRP4Q96MN2 994 aa20.96■□□□□ 0.95
HDAC4-217ENST00000553145 POLR3CQ9BUI4 534 aaPredicted RBP20.96■□□□□ 0.95
HDAC4-217ENST00000553145 GCOM2Q9BZD3 368 aaPredicted RBP20.96■□□□□ 0.95
HDAC4-217ENST00000553145 C1orf112Q9NSG2 853 aa20.96■□□□□ 0.95
HDAC4-217ENST00000553145 COL4A3BPQ9Y5P4 624 aa20.96■□□□□ 0.95
HDAC4-217ENST00000553145 MTCH2Q9Y6C9 303 aa20.96■□□□□ 0.95
HDAC4-217ENST00000553145 NLRC5Q86WI3 1866 aa20.96■□□□□ 0.95
HDAC4-217ENST00000553145 STAG3L1P0CL83 205 aa20.95■□□□□ 0.94
HDAC4-217ENST00000553145 POU3F3P20264 500 aaPredicted RBP20.95■□□□□ 0.94
HDAC4-217ENST00000553145 CDC42EP1Q00587 391 aa20.95■□□□□ 0.94
HDAC4-217ENST00000553145 CCDC85BQ15834 202 aaPredicted RBP20.95■□□□□ 0.94
HDAC4-217ENST00000553145 IL17AQ16552 155 aa20.95■□□□□ 0.94
HDAC4-217ENST00000553145 RILPL1Q5EBL4 403 aa20.95■□□□□ 0.94
HDAC4-217ENST00000553145 POTEGQ6S5H5 508 aa20.95■□□□□ 0.94
HDAC4-217ENST00000553145 FAM43BQ6ZT52 329 aaPredicted RBP20.95■□□□□ 0.94
HDAC4-217ENST00000553145 SLC24A5Q71RS6 500 aa20.95■□□□□ 0.94
HDAC4-217ENST00000553145 EXOC8Q8IYI6 725 aa20.95■□□□□ 0.94
HDAC4-217ENST00000553145 FIBCD1Q8N539 461 aa20.95■□□□□ 0.94
HDAC4-217ENST00000553145 SLC17A8Q8NDX2 589 aa20.95■□□□□ 0.94
HDAC4-217ENST00000553145 FBXO22Q8NEZ5 403 aa20.95■□□□□ 0.94
HDAC4-217ENST00000553145 PSPC1Q8WXF1 523 aaKnown RBP20.95■□□□□ 0.94
HDAC4-217ENST00000553145 MTRQ99707 1265 aa20.95■□□□□ 0.94
HDAC4-217ENST00000553145 IFT122Q9HBG6 1241 aa20.95■□□□□ 0.94
HDAC4-217ENST00000553145 EYSQ5T1H1 3165 aa20.95■□□□□ 0.94
HDAC4-217ENST00000553145 RPA1P27694 616 aa20.94■□□□□ 0.94
HDAC4-217ENST00000553145 LAMTOR4Q0VGL1 99 aa20.94■□□□□ 0.94
HDAC4-217ENST00000553145 BTG3Q14201 252 aaPredicted RBP20.94■□□□□ 0.94
HDAC4-217ENST00000553145 EPC2Q52LR7 807 aa20.94■□□□□ 0.94
HDAC4-217ENST00000553145 TMEM192Q8IY95 271 aa20.94■□□□□ 0.94
HDAC4-217ENST00000553145 MICALL1Q8N3F8 863 aa20.94■□□□□ 0.94
HDAC4-217ENST00000553145 PRDM6Q9NQX0 595 aa20.94■□□□□ 0.94
HDAC4-217ENST00000553145 LRFN2Q9ULH4 789 aa20.94■□□□□ 0.94
HDAC4-217ENST00000553145 RALGAPA2Q2PPJ7 1873 aa20.94■□□□□ 0.94
HDAC4-217ENST00000553145 K7ELQ4 463 aaPredicted RBP20.93■□□□□ 0.94
HDAC4-217ENST00000553145 GAS2O43903 313 aaKnown RBP20.93■□□□□ 0.94
HDAC4-217ENST00000553145 FAM189BP81408 668 aa20.93■□□□□ 0.94
HDAC4-217ENST00000553145 ECM1Q16610 540 aa20.93■□□□□ 0.94
HDAC4-217ENST00000553145 PAN2Q504Q3 1202 aaKnown RBP20.93■□□□□ 0.94
HDAC4-217ENST00000553145 FERMT3Q86UX7 667 aa20.93■□□□□ 0.94
HDAC4-217ENST00000553145 CMTR2Q8IYT2 770 aaKnown RBP20.93■□□□□ 0.94
HDAC4-217ENST00000553145 IGSF22Q8N9C0 903 aa20.93■□□□□ 0.94
HDAC4-217ENST00000553145 ERMNQ8TAM6 284 aa20.93■□□□□ 0.94
HDAC4-217ENST00000553145 TCP11Q8WWU5 503 aa20.93■□□□□ 0.94
HDAC4-217ENST00000553145 SAMD11Q96NU1 681 aa20.93■□□□□ 0.94
HDAC4-217ENST00000553145 MINDY3Q9H8M7 445 aa20.93■□□□□ 0.94
HDAC4-217ENST00000553145 ATP6V0A4Q9HBG4 840 aa20.93■□□□□ 0.94
HDAC4-217ENST00000553145 LRWD1Q9UFC0 647 aa20.93■□□□□ 0.94
HDAC4-217ENST00000553145 PCDHB7Q9Y5E2 793 aa20.93■□□□□ 0.94
HDAC4-217ENST00000553145 MRPL42Q9Y6G3 142 aaKnown RBP20.93■□□□□ 0.94
HDAC4-217ENST00000553145 KIAA1671Q9BY89 1806 aa20.92■□□□□ 0.94
HDAC4-217ENST00000553145 PP2D1A8MPX8 630 aa20.92■□□□□ 0.94
HDAC4-217ENST00000553145 LAD1O00515 517 aa20.92■□□□□ 0.94
HDAC4-217ENST00000553145 GTPBP6O43824 516 aaPredicted RBP20.92■□□□□ 0.94
HDAC4-217ENST00000553145 USO1O60763 962 aaKnown RBP20.92■□□□□ 0.94
HDAC4-217ENST00000553145 DGAT1O75907 488 aa20.92■□□□□ 0.94
HDAC4-217ENST00000553145 SRGAP2CP0DJJ0 459 aa20.92■□□□□ 0.94
HDAC4-217ENST00000553145 XRCC6P12956 609 aaKnown RBP eCLIP20.92■□□□□ 0.94
HDAC4-217ENST00000553145 PRPHP41219 470 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms