RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 STK38Q15208 465 aa15.72■□□□□ 0.11
PTCH1-226ENST00000553011 SPECC1Q5M775 1068 aa15.72■□□□□ 0.11
PTCH1-226ENST00000553011 CABP7Q86V35 215 aa15.72■□□□□ 0.11
PTCH1-226ENST00000553011 RHPN2Q8IUC4 686 aa15.72■□□□□ 0.11
PTCH1-226ENST00000553011 EXOC8Q8IYI6 725 aa15.72■□□□□ 0.11
PTCH1-226ENST00000553011 AK8Q96MA6 479 aa15.72■□□□□ 0.11
PTCH1-226ENST00000553011 SCLT1Q96NL6 688 aa15.72■□□□□ 0.11
PTCH1-226ENST00000553011 CLIC6Q96NY7 704 aa15.72■□□□□ 0.11
PTCH1-226ENST00000553011 CSRNP2Q9H175 543 aa15.72■□□□□ 0.11
PTCH1-226ENST00000553011 BHMT2Q9H2M3 363 aa15.72■□□□□ 0.11
PTCH1-226ENST00000553011 ATP6V0A4Q9HBG4 840 aa15.72■□□□□ 0.11
PTCH1-226ENST00000553011 PADI3Q9ULW8 664 aa15.72■□□□□ 0.11
PTCH1-226ENST00000553011 SRPRBQ9Y5M8 271 aaKnown RBP15.72■□□□□ 0.11
PTCH1-226ENST00000553011 A0A087WZ62 844 aa15.71■□□□□ 0.11
PTCH1-226ENST00000553011 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.71■□□□□ 0.11
PTCH1-226ENST00000553011 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.71■□□□□ 0.11
PTCH1-226ENST00000553011 RPS6KA5O75582 802 aa15.71■□□□□ 0.11
PTCH1-226ENST00000553011 KCNJ6P48051 423 aa15.71■□□□□ 0.11
PTCH1-226ENST00000553011 DNM1Q05193 864 aaKnown RBP15.71■□□□□ 0.11
PTCH1-226ENST00000553011 HYIQ5T013 277 aa15.71■□□□□ 0.11
PTCH1-226ENST00000553011 PADI6Q6TGC4 694 aa15.71■□□□□ 0.11
PTCH1-226ENST00000553011 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.71■□□□□ 0.11
PTCH1-226ENST00000553011 USP49Q70CQ1 688 aa15.71■□□□□ 0.11
PTCH1-226ENST00000553011 TMCO2Q7Z6W1 182 aaPredicted RBP15.71■□□□□ 0.11
PTCH1-226ENST00000553011 FAM228AQ86W67 206 aa15.71■□□□□ 0.11
PTCH1-226ENST00000553011 USP38Q8NB14 1042 aa15.71■□□□□ 0.11
PTCH1-226ENST00000553011 LINC00301Q8NCQ3 95 aa15.71■□□□□ 0.11
PTCH1-226ENST00000553011 PRPF31Q8WWY3 499 aaKnown RBP15.71■□□□□ 0.11
PTCH1-226ENST00000553011 NLRP7Q8WX94 980 aa15.71■□□□□ 0.11
PTCH1-226ENST00000553011 PSPC1Q8WXF1 523 aaKnown RBP15.71■□□□□ 0.11
PTCH1-226ENST00000553011 APBB2Q92870 758 aa15.71■□□□□ 0.11
PTCH1-226ENST00000553011 CHAMP1Q96JM3 812 aa15.71■□□□□ 0.11
PTCH1-226ENST00000553011 NLRP4Q96MN2 994 aa15.71■□□□□ 0.11
PTCH1-226ENST00000553011 FDXACB1Q9BRP7 624 aaPredicted RBP15.71■□□□□ 0.11
PTCH1-226ENST00000553011 ERVK-5Q9HDB9 667 aa15.71■□□□□ 0.11
PTCH1-226ENST00000553011 COL4A3BPQ9Y5P4 624 aa15.71■□□□□ 0.11
PTCH1-226ENST00000553011 MORC2Q9Y6X9 1032 aaPredicted RBP15.71■□□□□ 0.11
PTCH1-226ENST00000553011 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.7■□□□□ 0.1
PTCH1-226ENST00000553011 SPTLC2O15270 562 aa15.7■□□□□ 0.1
PTCH1-226ENST00000553011 GAS2O43903 313 aaKnown RBP15.7■□□□□ 0.1
PTCH1-226ENST00000553011 CSDE1O75534 798 aaKnown RBP15.7■□□□□ 0.1
PTCH1-226ENST00000553011 EYA4O95677 639 aa15.7■□□□□ 0.1
PTCH1-226ENST00000553011 DARSP14868 501 aaKnown RBP15.7■□□□□ 0.1
PTCH1-226ENST00000553011 ATP2A2P16615 1042 aaKnown RBP15.7■□□□□ 0.1
PTCH1-226ENST00000553011 EIF4BP23588 611 aaKnown RBP15.7■□□□□ 0.1
PTCH1-226ENST00000553011 UBA7P41226 1012 aa15.7■□□□□ 0.1
PTCH1-226ENST00000553011 LAMTOR4Q0VGL1 99 aa15.7■□□□□ 0.1
PTCH1-226ENST00000553011 NFX1Q12986 1120 aaKnown RBP15.7■□□□□ 0.1
PTCH1-226ENST00000553011 PAK2Q13177 524 aa15.7■□□□□ 0.1
PTCH1-226ENST00000553011 KARSQ15046 597 aaKnown RBP15.7■□□□□ 0.1
PTCH1-226ENST00000553011 TMEM119Q4V9L6 283 aa15.7■□□□□ 0.1
PTCH1-226ENST00000553011 MAEAQ7L5Y9 396 aa15.7■□□□□ 0.1
PTCH1-226ENST00000553011 ASAP3Q8TDY4 903 aa15.7■□□□□ 0.1
PTCH1-226ENST00000553011 TCP11Q8WWU5 503 aa15.7■□□□□ 0.1
PTCH1-226ENST00000553011 LINC01599Q8WXQ3 324 aa15.7■□□□□ 0.1
PTCH1-226ENST00000553011 EPSTI1Q96J88 318 aa15.7■□□□□ 0.1
PTCH1-226ENST00000553011 CDK5RAP3Q96JB5 506 aa15.7■□□□□ 0.1
PTCH1-226ENST00000553011 SLC9A7Q96T83 725 aa15.7■□□□□ 0.1
PTCH1-226ENST00000553011 POLR3FQ9H1D9 316 aaPredicted RBP15.7■□□□□ 0.1
PTCH1-226ENST00000553011 TMX1Q9H3N1 280 aa15.7■□□□□ 0.1
PTCH1-226ENST00000553011 GPRC5CQ9NQ84 441 aa15.7■□□□□ 0.1
PTCH1-226ENST00000553011 DNM3Q9UQ16 869 aa15.7■□□□□ 0.1
PTCH1-226ENST00000553011 EFCAB14O75071 495 aa15.69■□□□□ 0.1
PTCH1-226ENST00000553011 YEATS4O95619 227 aa15.69■□□□□ 0.1
PTCH1-226ENST00000553011 SRGAP2CP0DJJ0 459 aa15.69■□□□□ 0.1
PTCH1-226ENST00000553011 CYP11B2P19099 503 aa15.69■□□□□ 0.1
PTCH1-226ENST00000553011 FGFR4P22455 802 aa15.69■□□□□ 0.1
PTCH1-226ENST00000553011 PBX2P40425 430 aa15.69■□□□□ 0.1
PTCH1-226ENST00000553011 RABGGTBP53611 331 aa15.69■□□□□ 0.1
PTCH1-226ENST00000553011 SMAD3P84022 425 aaKnown RBP15.69■□□□□ 0.1
PTCH1-226ENST00000553011 ZNF410Q86VK4 478 aa15.69■□□□□ 0.1
PTCH1-226ENST00000553011 ZNF710Q8N1W2 664 aa15.69■□□□□ 0.1
PTCH1-226ENST00000553011 KRI1Q8N9T8 703 aaKnown RBP15.69■□□□□ 0.1
PTCH1-226ENST00000553011 LRRC15Q8TF66 581 aa15.69■□□□□ 0.1
PTCH1-226ENST00000553011 SYMPKQ92797 1274 aaKnown RBP15.69■□□□□ 0.1
PTCH1-226ENST00000553011 GCOM2Q9BZD3 368 aaPredicted RBP15.69■□□□□ 0.1
PTCH1-226ENST00000553011 NT5C3AQ9H0P0 336 aa15.69■□□□□ 0.1
PTCH1-226ENST00000553011 POLD4Q9HCU8 107 aa15.69■□□□□ 0.1
PTCH1-226ENST00000553011 ST3GAL5Q9UNP4 418 aa15.69■□□□□ 0.1
PTCH1-226ENST00000553011 MGEA5O60502 916 aa15.68■□□□□ 0.1
PTCH1-226ENST00000553011 GLRA2P23416 452 aa15.68■□□□□ 0.1
PTCH1-226ENST00000553011 DDIT3P35638 169 aa15.68■□□□□ 0.1
PTCH1-226ENST00000553011 ARL2P36404 184 aa15.68■□□□□ 0.1
PTCH1-226ENST00000553011 CDC42EP1Q00587 391 aa15.68■□□□□ 0.1
PTCH1-226ENST00000553011 FAM102BQ5T8I3 360 aa15.68■□□□□ 0.1
PTCH1-226ENST00000553011 FAM117BQ6P1L5 589 aa15.68■□□□□ 0.1
PTCH1-226ENST00000553011 RTN4RL1Q86UN2 441 aaPredicted RBP15.68■□□□□ 0.1
PTCH1-226ENST00000553011 HERC6Q8IVU3 1022 aa15.68■□□□□ 0.1
PTCH1-226ENST00000553011 MYOCDQ8IZQ8 938 aa15.68■□□□□ 0.1
PTCH1-226ENST00000553011 RNF149Q8NC42 400 aa15.68■□□□□ 0.1
PTCH1-226ENST00000553011 MCPH1Q8NEM0 835 aa15.68■□□□□ 0.1
PTCH1-226ENST00000553011 PHOSPHO2Q8TCD6 241 aa15.68■□□□□ 0.1
PTCH1-226ENST00000553011 CALML4Q96GE6 196 aa15.68■□□□□ 0.1
PTCH1-226ENST00000553011 RUSC1Q9BVN2 902 aa15.68■□□□□ 0.1
PTCH1-226ENST00000553011 PBX4Q9BYU1 374 aa15.68■□□□□ 0.1
PTCH1-226ENST00000553011 CCSER1Q9C0I3 900 aa15.68■□□□□ 0.1
PTCH1-226ENST00000553011 IFT122Q9HBG6 1241 aa15.68■□□□□ 0.1
PTCH1-226ENST00000553011 ENPP3O14638 875 aa15.67■□□□□ 0.1
PTCH1-226ENST00000553011 GPR182O15218 404 aa15.67■□□□□ 0.1
PTCH1-226ENST00000553011 ASAP2O43150 1006 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms