RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 RASIP1Q5U651 963 aa11.4□□□□□ -0.58
TRAFD1-208ENST00000552890 RUFY4Q6ZNE9 571 aa11.4□□□□□ -0.58
TRAFD1-208ENST00000552890 RHPN2Q8IUC4 686 aa11.4□□□□□ -0.58
TRAFD1-208ENST00000552890 ZBTB8OSQ8IWT0 167 aa11.4□□□□□ -0.58
TRAFD1-208ENST00000552890 HACE1Q8IYU2 909 aa11.4□□□□□ -0.58
TRAFD1-208ENST00000552890 LINC01465Q8N7H1 131 aa11.4□□□□□ -0.58
TRAFD1-208ENST00000552890 LINC00301Q8NCQ3 95 aa11.4□□□□□ -0.58
TRAFD1-208ENST00000552890 TRAPPC12Q8WVT3 735 aa11.4□□□□□ -0.58
TRAFD1-208ENST00000552890 CCDC51Q96ER9 411 aa11.4□□□□□ -0.58
TRAFD1-208ENST00000552890 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.4□□□□□ -0.585e-7■■■□□ 18.9
TRAFD1-208ENST00000552890 ZBED2Q9BTP6 218 aa11.4□□□□□ -0.58
TRAFD1-208ENST00000552890 LARSQ9P2J5 1176 aaKnown RBP11.4□□□□□ -0.58
TRAFD1-208ENST00000552890 USP25Q9UHP3 1055 aa11.4□□□□□ -0.58
TRAFD1-208ENST00000552890 TELO2Q9Y4R8 837 aa11.4□□□□□ -0.58
TRAFD1-208ENST00000552890 LTBP2Q14767 1821 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 TRIP12Q14669 1992 aaPredicted RBP11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 TRIOBPQ9H2D6 2365 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 GOLGA6L4A6NEF3 574 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 WNT7AO00755 349 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 NBNO60934 754 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 MED24O75448 989 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 STBD1O95210 358 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 DARSP14868 501 aaKnown RBP11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 ME1P48163 572 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 RAB27AP51159 221 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 GPC3P51654 580 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 CLCN3P51790 818 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 MGAT3Q09327 533 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 PTPAQ15257 358 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 SHHQ15465 462 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 KIZQ2M2Z5 673 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 RRAGBQ5VZM2 374 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 FAM109BQ6ICB4 259 aaPredicted RBP11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 POTEGQ6S5H5 508 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 PADI6Q6TGC4 694 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 OTOP2Q7RTS6 562 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 SPRYD3Q8NCJ5 442 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 CNNM3Q8NE01 707 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 DBF4BQ8NFT6 615 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 PIGOQ8TEQ8 1089 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 PRIMPOLQ96LW4 560 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 BHMT2Q9H2M3 363 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 ODF2LQ9ULJ1 636 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 GINS2Q9Y248 185 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 RWDD3Q9Y3V2 267 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 INSL6Q9Y581 213 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 PCDHA11Q9Y5I1 949 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 WDR81Q562E7 1941 aa11.39□□□□□ -0.59
TRAFD1-208ENST00000552890 UMODL1Q5DID0 1318 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 TANC1Q9C0D5 1861 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 GPR32O75388 356 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 ERLIN2O94905 339 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 ACRP10323 421 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 GHRP10912 638 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 NCLP19338 710 aaKnown RBP11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 GUCY2CP25092 1073 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 DDIT3P35638 169 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 NAMPTP43490 491 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 NPEPPSP55786 919 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 LAMTOR4Q0VGL1 99 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 DMP1Q13316 513 aaPredicted RBP11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 HIC1Q14526 733 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 HSP90AA2PQ14568 343 aaPredicted RBP11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 LPIN1Q14693 890 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 ZRSR1Q15695 479 aaKnown RBP11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 PLA2G4FQ68DD2 849 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 TRAF7Q6Q0C0 670 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 SLC24A5Q71RS6 500 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 IFNLR1Q8IU57 520 aaPredicted RBP11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 LRRC71Q8N4P6 559 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 SYT2Q8N9I0 419 aaPredicted RBP11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 IQUBQ8NA54 791 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 PRPF31Q8WWY3 499 aaKnown RBP11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 SPATA32Q96LK8 384 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 SAMD11Q96NU1 681 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 USP28Q96RU2 1077 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 CEP89Q96ST8 783 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 TRAIPQ9BWF2 469 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 TSPYL2Q9H2G4 693 aaPredicted RBP11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 UBN1Q9NPG3 1134 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 RCOR1Q9UKL0 485 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 LRFN2Q9ULH4 789 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 PADI3Q9ULW8 664 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 CLIC4Q9Y696 253 aa11.38□□□□□ -0.59
TRAFD1-208ENST00000552890 USO1O60763 962 aaKnown RBP11.37□□□□□ -0.59
TRAFD1-208ENST00000552890 EOMESO95936 686 aa11.37□□□□□ -0.59
TRAFD1-208ENST00000552890 VTNP04004 478 aa11.37□□□□□ -0.59
TRAFD1-208ENST00000552890 KRT18P05783 430 aaKnown RBP11.37□□□□□ -0.59
TRAFD1-208ENST00000552890 MARCKSP29966 332 aaPredicted RBP11.37□□□□□ -0.59
TRAFD1-208ENST00000552890 ARL2P36404 184 aa11.37□□□□□ -0.59
TRAFD1-208ENST00000552890 CEBPZQ03701 1054 aaKnown RBP11.37□□□□□ -0.59
TRAFD1-208ENST00000552890 NFX1Q12986 1120 aaKnown RBP11.37□□□□□ -0.59
TRAFD1-208ENST00000552890 TMEM119Q4V9L6 283 aa11.37□□□□□ -0.59
TRAFD1-208ENST00000552890 FAM102BQ5T8I3 360 aa11.37□□□□□ -0.59
TRAFD1-208ENST00000552890 SV2BQ7L1I2 683 aa11.37□□□□□ -0.59
TRAFD1-208ENST00000552890 C16orf59Q7L2K0 433 aa11.37□□□□□ -0.59
TRAFD1-208ENST00000552890 CATSPER4Q7RTX7 472 aa11.37□□□□□ -0.59
TRAFD1-208ENST00000552890 RNF149Q8NC42 400 aa11.37□□□□□ -0.59
TRAFD1-208ENST00000552890 LARP4BQ92615 738 aaKnown RBP11.37□□□□□ -0.59
TRAFD1-208ENST00000552890 PGBD4Q96DM1 585 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms