RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.65□□□□□ -0.86
AC055716.2-201ENST00000552545 RNF208Q9H0X6 261 aa9.65□□□□□ -0.86
AC055716.2-201ENST00000552545 CBX8Q9HC52 389 aa9.65□□□□□ -0.86
AC055716.2-201ENST00000552545 XPNPEP1Q9NQW7 623 aa9.65□□□□□ -0.86
AC055716.2-201ENST00000552545 SETD4Q9NVD3 440 aa9.65□□□□□ -0.86
AC055716.2-201ENST00000552545 LARSQ9P2J5 1176 aaKnown RBP9.65□□□□□ -0.86
AC055716.2-201ENST00000552545 ZBTB42B2RXF5 422 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 ASGR1P07306 291 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 HOXD8P13378 290 aaPredicted RBP9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 KLRC1P26715 233 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 MAPK7Q13164 816 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 TARBP2Q15633 366 aaKnown RBP9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 GRIK4Q16099 956 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 FAM47CQ5HY64 1035 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 KSR1Q8IVT5 923 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 DAW1Q8N136 415 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 AOPEPQ8N6M6 819 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 C7orf31Q8N865 590 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 KIAA0895Q8NCT3 520 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 KIFAP3Q92845 792 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 ZNF668Q96K58 619 aaPredicted RBP9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 IFT74Q96LB3 600 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 PPP1R16BQ96T49 567 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 MTG1Q9BT17 334 aaPredicted RBP9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 KATNAL1Q9BW62 490 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 UPF3AQ9H1J1 476 aaKnown RBP9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 DHX33Q9H6R0 707 aaKnown RBP9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 PRDM10Q9NQV6 1147 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 PPP1R3GB7ZBB8 358 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 K7ENM7 598 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 SLC16A4O15374 487 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 MSCO60682 206 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 KPNA6O60684 536 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 ADAMTS4O75173 837 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 MAFO75444 373 aaPredicted RBP9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 PRPF6O94906 941 aaKnown RBP9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 F2P00734 622 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 SMIM10L2AP0DMW4 78 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 SMIM10L2BP0DMW5 78 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 MYBP10242 640 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 PLS3P13797 630 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 DNM2P50570 870 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 CASP5P51878 434 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 DMP1Q13316 513 aaPredicted RBP9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 TPD52L1Q16890 204 aaPredicted RBP9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 ZC2HC1CQ53FD0 456 aaPredicted RBP9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 PCSK9Q8NBP7 692 aaKnown RBP9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 RETREG2Q8NC44 543 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 FAM200AQ8TCP9 573 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 NELFBQ8WX92 580 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 DEFB118Q96PH6 123 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 TIPINQ9BVW5 301 aa9.64□□□□□ -0.87
AC055716.2-201ENST00000552545 FRMD3A2A2Y4 597 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 GOLGA6L19H0YKK7 550 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 PSMA7O14818 248 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 SRGAP2CP0DJJ0 459 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 CCL5P13501 91 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 CLCN3P51790 818 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 SMTNP53814 917 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 DRP2Q13474 957 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 HSP90AA4PQ58FG1 418 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 RHPN2Q8IUC4 686 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 CREBRFQ8IUR6 639 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 EXOC8Q8IYI6 725 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 MYOCDQ8IZQ8 938 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 CEP89Q96ST8 783 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 KIFC3Q9BVG8 833 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 KMT5AQ9NQR1 393 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 PDLIM7Q9NR12 457 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 SUCLA2Q9P2R7 463 aaPredicted RBP9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 HDAC6Q9UBN7 1215 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 FRMPD3Q5JV73 1810 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 TRIM49BA6NDI0 452 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 LRRIQ4A6NIV6 560 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 GJB1P08034 283 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 ZNF131P52739 623 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 ZNF200P98182 395 aaPredicted RBP9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 EHHADHQ08426 723 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 PAK1Q13153 545 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 NBPF20Q3BBV1 942 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 LHX8Q68G74 356 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 MTHFD1LQ6UB35 978 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 ADSSL1Q8N142 457 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 ASAP3Q8TDY4 903 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 LMBR1Q8WVP7 490 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 TCP11Q8WWU5 503 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 PRPF31Q8WWY3 499 aaKnown RBP9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 BSNDQ8WZ55 320 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 JPH2Q9BR39 696 aaPredicted RBP9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 SEL1LQ9UBV2 794 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 AKT3Q9Y243 479 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 PCDHA2Q9Y5H9 948 aa9.63□□□□□ -0.87
AC055716.2-201ENST00000552545 BRCA2P51587 3418 aa9.62□□□□□ -0.87
AC055716.2-201ENST00000552545 C17orf102A2RUQ5 167 aa9.62□□□□□ -0.87
AC055716.2-201ENST00000552545 C22orf31O95567 290 aa9.62□□□□□ -0.87
AC055716.2-201ENST00000552545 CAVIN2O95810 425 aa9.62□□□□□ -0.87
AC055716.2-201ENST00000552545 TMOD1P28289 359 aa9.62□□□□□ -0.87
AC055716.2-201ENST00000552545 NPTX2P47972 431 aa9.62□□□□□ -0.87
AC055716.2-201ENST00000552545 IER5Q5VY09 327 aa9.62□□□□□ -0.87
AC055716.2-201ENST00000552545 NFRKBQ6P4R8 1299 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms