RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 INPP5FQ9Y2H2 1132 aa11.66□□□□□ -0.54
TGFBR1-209ENST00000552516 UTRNP46939 3433 aa11.66□□□□□ -0.54
TGFBR1-209ENST00000552516 WDR91A4D1P6 747 aa11.66□□□□□ -0.54
TGFBR1-209ENST00000552516 PPP1R11O60927 126 aaPredicted RBP11.66□□□□□ -0.54
TGFBR1-209ENST00000552516 GGPS1O95749 300 aa11.66□□□□□ -0.54
TGFBR1-209ENST00000552516 KRT15P19012 456 aa11.66□□□□□ -0.54
TGFBR1-209ENST00000552516 PTK2Q05397 1052 aa11.66□□□□□ -0.54
TGFBR1-209ENST00000552516 MAP1SQ66K74 1059 aaPredicted RBP11.66□□□□□ -0.54
TGFBR1-209ENST00000552516 C1orf54Q8WWF1 131 aa11.66□□□□□ -0.54
TGFBR1-209ENST00000552516 DHX38Q92620 1227 aaKnown RBP11.66□□□□□ -0.54
TGFBR1-209ENST00000552516 MTRQ99707 1265 aa11.66□□□□□ -0.54
TGFBR1-209ENST00000552516 MTRF1LQ9UGC7 380 aaKnown RBP11.66□□□□□ -0.54
TGFBR1-209ENST00000552516 CD2APQ9Y5K6 639 aa11.66□□□□□ -0.54
TGFBR1-209ENST00000552516 A0A087X0T9 212 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 FAM228BP0C875 321 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 KCNJ1P48048 391 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 LIN9Q5TKA1 542 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 MIS18BP1Q6P0N0 1132 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 XXYLT1Q8NBI6 393 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 CALCOCO1Q9P1Z2 691 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 WDR64B1ANS9 1081 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 CTSHP09668 335 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 VAMP7P51809 220 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 USP14P54578 494 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 POTEAQ6S8J7 498 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 NSUN6Q8TEA1 469 aaKnown RBP11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 MED10Q9BTT4 135 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 NRBP2Q9NSY0 501 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 NYAP2Q9P242 653 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 COMMD10Q9Y6G5 202 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 MYO9BQ13459 2157 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 CLDN3O15551 220 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 CAP2P40123 477 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 ZSCAN26Q16670 478 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 SPOPLQ6IQ16 392 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 BCAS4Q8TDM0 211 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 SPATA33Q96N06 139 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 HERC5Q9UII4 1024 aaKnown RBP11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 RGPD5Q99666 1765 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 EBAG9O00559 213 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 P4HBP07237 508 aaKnown RBP11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 PSAPP07602 524 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 TCP1P17987 556 aaKnown RBP11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 ERFP50548 548 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 PAK2Q13177 524 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 STXBP2Q15833 593 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 CBWD2Q8IUF1 395 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 ZNF280CQ8ND82 737 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 IL31RAQ8NI17 732 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 PITPNM2Q9BZ72 1349 aa11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 GOLGA4Q13439 2230 aaKnown RBP11.65□□□□□ -0.54
TGFBR1-209ENST00000552516 LRRD1A4D1F6 860 aa11.65□□□□□ -0.55
TGFBR1-209ENST00000552516 WEE2P0C1S8 567 aa11.65□□□□□ -0.55
TGFBR1-209ENST00000552516 IRX4P78413 519 aa11.65□□□□□ -0.55
TGFBR1-209ENST00000552516 C10orf76Q5T2E6 689 aa11.65□□□□□ -0.55
TGFBR1-209ENST00000552516 HSPH1Q92598 858 aa11.65□□□□□ -0.55
TGFBR1-209ENST00000552516 OSBPL9Q96SU4 736 aa11.65□□□□□ -0.55
TGFBR1-209ENST00000552516 TARS2Q9BW92 718 aaKnown RBP11.65□□□□□ -0.55
TGFBR1-209ENST00000552516 INTS2Q9H0H0 1204 aaKnown RBP11.65□□□□□ -0.55
TGFBR1-209ENST00000552516 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.65□□□□□ -0.55
TGFBR1-209ENST00000552516 ANKRD26Q9UPS8 1709 aa11.65□□□□□ -0.55
TGFBR1-209ENST00000552516 UCHL3P15374 230 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 PPP6R3Q5H9R7 873 aaPredicted RBP11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 AKAP3O75969 853 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 SLC4A1P02730 911 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 LIG3P49916 1009 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 NAALADL2Q58DX5 795 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 RINT1Q6NUQ1 792 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 FAM20AQ96MK3 541 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 MNAT1P51948 309 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 GLRA4Q5JXX5 417 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 TTI2Q6NXR4 508 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 CC2D1AQ6P1N0 951 aaPredicted RBP11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 UBE2Q2Q8WVN8 375 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 SHISA4Q96DD7 197 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 MIS12Q9H081 205 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 IQCGQ9H095 443 aaKnown RBP11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 FMN2Q9NZ56 1722 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 PVALEFA0A1B0GWK0 134 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 USP11P51784 963 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 PDCLQ13371 301 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 RBM43Q6ZSC3 357 aaKnown RBP11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 HEXIM2Q96MH2 286 aaKnown RBP11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 TRIM51Q9BSJ1 452 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 NGRNQ9NPE2 291 aaKnown RBP11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 JRKLQ9Y4A0 524 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 ZBTB22O15209 634 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 VCAM1P19320 739 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 FGFR4P22455 802 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 MFAP3P55082 362 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 ZNF302Q9NR11 478 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 BLOC1S4Q9NUP1 217 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 GGT7Q9UJ14 662 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 CAPN11Q9UMQ6 739 aa11.64□□□□□ -0.55
TGFBR1-209ENST00000552516 YDJCA8MPS7 323 aa11.63□□□□□ -0.55
TGFBR1-209ENST00000552516 ATXN8OSP0DMR3 200 aa11.63□□□□□ -0.55
TGFBR1-209ENST00000552516 GGCXP38435 758 aa11.63□□□□□ -0.55
TGFBR1-209ENST00000552516 SCFD1Q8WVM8 642 aa11.63□□□□□ -0.55
TGFBR1-209ENST00000552516 PNKPQ96T60 521 aa11.63□□□□□ -0.55
TGFBR1-209ENST00000552516 MAGEF1Q9HAY2 307 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms