RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 CATSPER3Q86XQ3 398 aa19.34■□□□□ 0.69
CDK4-208ENST00000551706 LINC01465Q8N7H1 131 aa19.34■□□□□ 0.69
CDK4-208ENST00000551706 SPRYD3Q8NCJ5 442 aa19.34■□□□□ 0.69
CDK4-208ENST00000551706 APBB2Q92870 758 aa19.34■□□□□ 0.69
CDK4-208ENST00000551706 SNX27Q96L92 541 aa19.34■□□□□ 0.69
CDK4-208ENST00000551706 SUGCTQ9HAC7 445 aa19.34■□□□□ 0.69
CDK4-208ENST00000551706 AKT3Q9Y243 479 aa19.34■□□□□ 0.69
CDK4-208ENST00000551706 ZBBXA8MT70 800 aa19.33■□□□□ 0.68
CDK4-208ENST00000551706 ATP2A2P16615 1042 aaKnown RBP19.33■□□□□ 0.68
CDK4-208ENST00000551706 MRE11P49959 708 aa19.33■□□□□ 0.68
CDK4-208ENST00000551706 CLCN3P51790 818 aa19.33■□□□□ 0.68
CDK4-208ENST00000551706 POLGP54098 1239 aaPredicted RBP19.33■□□□□ 0.68
CDK4-208ENST00000551706 NPEPPSP55786 919 aa19.33■□□□□ 0.68
CDK4-208ENST00000551706 TMEM62Q0P6H9 643 aa19.33■□□□□ 0.68
CDK4-208ENST00000551706 SF3A1Q15459 793 aaKnown RBP19.33■□□□□ 0.68
CDK4-208ENST00000551706 FBXO47Q5MNV8 452 aa19.33■□□□□ 0.68
CDK4-208ENST00000551706 KRT79Q5XKE5 535 aa19.33■□□□□ 0.68
CDK4-208ENST00000551706 FAM43BQ6ZT52 329 aaPredicted RBP19.33■□□□□ 0.68
CDK4-208ENST00000551706 LRRC71Q8N4P6 559 aa19.33■□□□□ 0.68
CDK4-208ENST00000551706 DBF4BQ8NFT6 615 aa19.33■□□□□ 0.68
CDK4-208ENST00000551706 AK8Q96MA6 479 aa19.33■□□□□ 0.68
CDK4-208ENST00000551706 NACC1Q96RE7 527 aa19.33■□□□□ 0.68
CDK4-208ENST00000551706 SH2D3AQ9BRG2 576 aa19.33■□□□□ 0.68
CDK4-208ENST00000551706 IFIH1Q9BYX4 1025 aaKnown RBP19.33■□□□□ 0.68
CDK4-208ENST00000551706 DHX33Q9H6R0 707 aaKnown RBP19.33■□□□□ 0.68
CDK4-208ENST00000551706 WDR81Q562E7 1941 aa19.32■□□□□ 0.68
CDK4-208ENST00000551706 MED24O75448 989 aa19.32■□□□□ 0.68
CDK4-208ENST00000551706 ZSCAN22P10073 491 aaPredicted RBP19.32■□□□□ 0.68
CDK4-208ENST00000551706 GHRP10912 638 aa19.32■□□□□ 0.68
CDK4-208ENST00000551706 CCT6AP40227 531 aaKnown RBP19.32■□□□□ 0.68
CDK4-208ENST00000551706 LPIN1Q14693 890 aa19.32■□□□□ 0.68
CDK4-208ENST00000551706 IL17AQ16552 155 aa19.32■□□□□ 0.68
CDK4-208ENST00000551706 TSHZ1Q6ZSZ6 1077 aa19.32■□□□□ 0.68
CDK4-208ENST00000551706 SNX29Q8TEQ0 813 aa19.32■□□□□ 0.68
CDK4-208ENST00000551706 CERS4Q9HA82 394 aa19.32■□□□□ 0.68
CDK4-208ENST00000551706 VWA3AA6NCI4 1184 aa19.31■□□□□ 0.68
CDK4-208ENST00000551706 PRR33A8MZF0 331 aa19.31■□□□□ 0.68
CDK4-208ENST00000551706 VTNP04004 478 aa19.31■□□□□ 0.68
CDK4-208ENST00000551706 CA3P07451 260 aa19.31■□□□□ 0.68
CDK4-208ENST00000551706 KCNJ6P48051 423 aa19.31■□□□□ 0.68
CDK4-208ENST00000551706 RARRES1P49788 294 aa19.31■□□□□ 0.68
CDK4-208ENST00000551706 CRYBB1P53674 252 aaPredicted RBP19.31■□□□□ 0.68
CDK4-208ENST00000551706 ODR4Q5SWX8 454 aa19.31■□□□□ 0.68
CDK4-208ENST00000551706 PHOSPHO2Q8TCD6 241 aa19.31■□□□□ 0.68
CDK4-208ENST00000551706 PIGOQ8TEQ8 1089 aa19.31■□□□□ 0.68
CDK4-208ENST00000551706 TCP11Q8WWU5 503 aa19.31■□□□□ 0.68
CDK4-208ENST00000551706 SLC9A7Q96T83 725 aa19.31■□□□□ 0.68
CDK4-208ENST00000551706 DBR1Q9UK59 544 aaKnown RBP19.31■□□□□ 0.68
CDK4-208ENST00000551706 GINS2Q9Y248 185 aa19.31■□□□□ 0.68
CDK4-208ENST00000551706 ZBTB39O15060 712 aa19.3■□□□□ 0.68
CDK4-208ENST00000551706 SLC26A4O43511 780 aa19.3■□□□□ 0.68
CDK4-208ENST00000551706 GPR32O75388 356 aa19.3■□□□□ 0.68
CDK4-208ENST00000551706 DGAT1O75907 488 aa19.3■□□□□ 0.68
CDK4-208ENST00000551706 NLRP11P59045 1033 aaKnown RBP19.3■□□□□ 0.68
CDK4-208ENST00000551706 KIZQ2M2Z5 673 aa19.3■□□□□ 0.68
CDK4-208ENST00000551706 FAM173BQ6P4H8 233 aa19.3■□□□□ 0.68
CDK4-208ENST00000551706 POTEGQ6S5H5 508 aa19.3■□□□□ 0.68
CDK4-208ENST00000551706 KCTD17Q8N5Z5 321 aa19.3■□□□□ 0.68
CDK4-208ENST00000551706 ZNF579Q8NAF0 562 aaKnown RBP19.3■□□□□ 0.68
CDK4-208ENST00000551706 ZNF396Q96N95 335 aaPredicted RBP19.3■□□□□ 0.68
CDK4-208ENST00000551706 SUCLA2Q9P2R7 463 aaPredicted RBP19.3■□□□□ 0.68
CDK4-208ENST00000551706 CLIC4Q9Y696 253 aa19.3■□□□□ 0.68
CDK4-208ENST00000551706 MORC2Q9Y6X9 1032 aaPredicted RBP19.3■□□□□ 0.68
CDK4-208ENST00000551706 SCN5AQ14524 2016 aa19.3■□□□□ 0.68
CDK4-208ENST00000551706 EPOPA6NHQ4 379 aa19.29■□□□□ 0.68
CDK4-208ENST00000551706 F13A1P00488 732 aa19.29■□□□□ 0.68
CDK4-208ENST00000551706 LONP1P36776 959 aaKnown RBP19.29■□□□□ 0.68
CDK4-208ENST00000551706 GPC3P51654 580 aa19.29■□□□□ 0.68
CDK4-208ENST00000551706 PAK2Q13177 524 aa19.29■□□□□ 0.68
CDK4-208ENST00000551706 MKRN4PQ13434 485 aaPredicted RBP19.29■□□□□ 0.68
CDK4-208ENST00000551706 EMC2Q15006 297 aa19.29■□□□□ 0.68
CDK4-208ENST00000551706 PSPC1Q8WXF1 523 aaKnown RBP19.29■□□□□ 0.68
CDK4-208ENST00000551706 MTRQ99707 1265 aa19.29■□□□□ 0.68
CDK4-208ENST00000551706 FTHL17Q9BXU8 183 aa19.29■□□□□ 0.68
CDK4-208ENST00000551706 CD320Q9NPF0 282 aa19.29■□□□□ 0.68
CDK4-208ENST00000551706 PP2D1A8MPX8 630 aa19.28■□□□□ 0.68
CDK4-208ENST00000551706 RPS6KA5O75582 802 aa19.28■□□□□ 0.68
CDK4-208ENST00000551706 WDR5P61964 334 aaKnown RBP19.28■□□□□ 0.68
CDK4-208ENST00000551706 DRP2Q13474 957 aa19.28■□□□□ 0.68
CDK4-208ENST00000551706 PTPAQ15257 358 aa19.28■□□□□ 0.68
CDK4-208ENST00000551706 ZNF410Q86VK4 478 aa19.28■□□□□ 0.68
CDK4-208ENST00000551706 SCLT1Q96NL6 688 aa19.28■□□□□ 0.68
CDK4-208ENST00000551706 USP28Q96RU2 1077 aa19.28■□□□□ 0.68
CDK4-208ENST00000551706 OSMRQ99650 979 aa19.28■□□□□ 0.68
CDK4-208ENST00000551706 OSBPL7Q9BZF2 842 aa19.28■□□□□ 0.68
CDK4-208ENST00000551706 NT5C3AQ9H0P0 336 aa19.28■□□□□ 0.68
CDK4-208ENST00000551706 ADAMTS10Q9H324 1103 aa19.28■□□□□ 0.68
CDK4-208ENST00000551706 AGO3Q9H9G7 860 aaKnown RBP19.28■□□□□ 0.68
CDK4-208ENST00000551706 ATP6V0A4Q9HBG4 840 aa19.28■□□□□ 0.68
CDK4-208ENST00000551706 DDX19AQ9NUU7 478 aaKnown RBP19.28■□□□□ 0.68
CDK4-208ENST00000551706 PADI3Q9ULW8 664 aa19.28■□□□□ 0.68
CDK4-208ENST00000551706 KIAA1024Q9UPX6 916 aa19.28■□□□□ 0.68
CDK4-208ENST00000551706 DNM3Q9UQ16 869 aa19.28■□□□□ 0.68
CDK4-208ENST00000551706 ARHGEF35A5YM69 484 aa19.27■□□□□ 0.68
CDK4-208ENST00000551706 GPR182O15218 404 aa19.27■□□□□ 0.68
CDK4-208ENST00000551706 ASAP2O43150 1006 aa19.27■□□□□ 0.68
CDK4-208ENST00000551706 EIF4BP23588 611 aaKnown RBP19.27■□□□□ 0.68
CDK4-208ENST00000551706 CD52P31358 61 aa19.27■□□□□ 0.68
CDK4-208ENST00000551706 UBA7P41226 1012 aa19.27■□□□□ 0.68
CDK4-208ENST00000551706 TCTN1Q2MV58 587 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms