RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 TBX3O15119 743 aa16.28■□□□□ 0.2
PDE1B-207ENST00000550620 KCNQ2O43526 872 aa16.28■□□□□ 0.2
PDE1B-207ENST00000550620 HOXD13P35453 343 aa16.28■□□□□ 0.2
PDE1B-207ENST00000550620 GABPAQ06546 454 aa16.28■□□□□ 0.2
PDE1B-207ENST00000550620 PABPC4Q13310 644 aaKnown RBP eCLIP16.28■□□□□ 0.2
PDE1B-207ENST00000550620 AP3B2Q13367 1082 aa16.28■□□□□ 0.2
PDE1B-207ENST00000550620 COL23A1Q86Y22 540 aaPredicted RBP16.28■□□□□ 0.2
PDE1B-207ENST00000550620 JAMLQ86YT9 394 aa16.28■□□□□ 0.2
PDE1B-207ENST00000550620 GLYCTKQ8IVS8 523 aa16.28■□□□□ 0.2
PDE1B-207ENST00000550620 TBC1D22AQ8WUA7 517 aa16.28■□□□□ 0.2
PDE1B-207ENST00000550620 ATXN2LQ8WWM7 1075 aaKnown RBP16.28■□□□□ 0.2
PDE1B-207ENST00000550620 CCDC134Q9H6E4 229 aa16.28■□□□□ 0.2
PDE1B-207ENST00000550620 MTRF1LQ9UGC7 380 aaKnown RBP16.28■□□□□ 0.2
PDE1B-207ENST00000550620 PPP1R9AQ9ULJ8 1098 aa16.28■□□□□ 0.2
PDE1B-207ENST00000550620 CEP83Q9Y592 693 aa16.28■□□□□ 0.2
PDE1B-207ENST00000550620 CFAP73A6NFT4 308 aa16.28■□□□□ 0.2
PDE1B-207ENST00000550620 RPS6KA4O75676 772 aa16.28■□□□□ 0.2
PDE1B-207ENST00000550620 GCNT3O95395 438 aa16.28■□□□□ 0.2
PDE1B-207ENST00000550620 IL1R1P14778 569 aa16.28■□□□□ 0.2
PDE1B-207ENST00000550620 ELF3P78545 371 aaPredicted RBP16.28■□□□□ 0.2
PDE1B-207ENST00000550620 KLRC3Q07444 240 aa16.28■□□□□ 0.2
PDE1B-207ENST00000550620 MAPK7Q13164 816 aa16.28■□□□□ 0.2
PDE1B-207ENST00000550620 NFIXQ14938 502 aa16.28■□□□□ 0.2
PDE1B-207ENST00000550620 RC3H1Q5TC82 1133 aaKnown RBP16.28■□□□□ 0.2
PDE1B-207ENST00000550620 TTBK2Q6IQ55 1244 aa16.28■□□□□ 0.2
PDE1B-207ENST00000550620 GJB7Q6PEY0 223 aa16.28■□□□□ 0.2
PDE1B-207ENST00000550620 PIGWQ7Z7B1 504 aa16.28■□□□□ 0.2
PDE1B-207ENST00000550620 INTS9Q9NV88 658 aaKnown RBP16.28■□□□□ 0.2
PDE1B-207ENST00000550620 SLC12A4Q9UP95 1085 aa16.28■□□□□ 0.2
PDE1B-207ENST00000550620 PCDHB13Q9Y5F0 798 aa16.28■□□□□ 0.2
PDE1B-207ENST00000550620 SBF2Q86WG5 1849 aa16.28■□□□□ 0.2
PDE1B-207ENST00000550620 MYO3BQ8WXR4 1341 aa16.27■□□□□ 0.2
PDE1B-207ENST00000550620 SYNGAP1Q96PV0 1343 aa16.27■□□□□ 0.2
PDE1B-207ENST00000550620 USP17L10C9JJH3 530 aa16.27■□□□□ 0.2
PDE1B-207ENST00000550620 SHBGP04278 402 aa16.27■□□□□ 0.2
PDE1B-207ENST00000550620 PSMC2P35998 433 aaKnown RBP16.27■□□□□ 0.2
PDE1B-207ENST00000550620 CASP4P49662 377 aa16.27■□□□□ 0.2
PDE1B-207ENST00000550620 PLTPP55058 493 aa16.27■□□□□ 0.2
PDE1B-207ENST00000550620 PPP1R7Q15435 360 aa16.27■□□□□ 0.2
PDE1B-207ENST00000550620 MFSD14BQ5SR56 506 aa16.27■□□□□ 0.2
PDE1B-207ENST00000550620 DCAF12L1Q5VU92 463 aa16.27■□□□□ 0.2
PDE1B-207ENST00000550620 BTNL9Q6UXG8 535 aa16.27■□□□□ 0.2
PDE1B-207ENST00000550620 CCDC63Q8NA47 563 aa16.27■□□□□ 0.2
PDE1B-207ENST00000550620 EPB41L4BQ9H329 900 aa16.27■□□□□ 0.2
PDE1B-207ENST00000550620 SUFUQ9UMX1 484 aa16.27■□□□□ 0.2
PDE1B-207ENST00000550620 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.27■□□□□ 0.2
PDE1B-207ENST00000550620 MYH4Q9Y623 1939 aa16.27■□□□□ 0.2
PDE1B-207ENST00000550620 USP17L15C9J2P7 530 aa16.27■□□□□ 0.19
PDE1B-207ENST00000550620 USP17L13C9JLJ4 530 aa16.27■□□□□ 0.19
PDE1B-207ENST00000550620 USP17L11C9JVI0 530 aa16.27■□□□□ 0.19
PDE1B-207ENST00000550620 USP17L18D6R9N7 530 aa16.27■□□□□ 0.19
PDE1B-207ENST00000550620 USP17L22D6RA61 530 aa16.27■□□□□ 0.19
PDE1B-207ENST00000550620 USP17L17D6RBQ6 530 aa16.27■□□□□ 0.19
PDE1B-207ENST00000550620 USP17L19D6RCP7 530 aa16.27■□□□□ 0.19
PDE1B-207ENST00000550620 USP17L20D6RJB6 530 aa16.27■□□□□ 0.19
PDE1B-207ENST00000550620 PODXLO00592 558 aa16.27■□□□□ 0.19
PDE1B-207ENST00000550620 ATP6V1G2O95670 118 aa16.27■□□□□ 0.19
PDE1B-207ENST00000550620 GAP43P17677 238 aa16.27■□□□□ 0.19
PDE1B-207ENST00000550620 ABCB4P21439 1286 aa16.27■□□□□ 0.19
PDE1B-207ENST00000550620 CHRNA3P32297 505 aa16.27■□□□□ 0.19
PDE1B-207ENST00000550620 SLC16A2P36021 539 aa16.27■□□□□ 0.19
PDE1B-207ENST00000550620 USP17L24Q0WX57 530 aa16.27■□□□□ 0.19
PDE1B-207ENST00000550620 HIBCHQ6NVY1 386 aaPredicted RBP16.27■□□□□ 0.19
PDE1B-207ENST00000550620 USP17L6PQ6QN14 398 aa16.27■□□□□ 0.19
PDE1B-207ENST00000550620 RHOT2Q8IXI1 618 aa16.27■□□□□ 0.19
PDE1B-207ENST00000550620 FAM186BQ8IYM0 893 aa16.27■□□□□ 0.19
PDE1B-207ENST00000550620 UIMC1Q96RL1 719 aa16.27■□□□□ 0.19
PDE1B-207ENST00000550620 NR2E1Q9Y466 385 aa16.27■□□□□ 0.19
PDE1B-207ENST00000550620 TLDC2A0PJX2 215 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 ANKRD62A6NC57 917 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 MIF4GDA9UHW6 222 aaKnown RBP16.26■□□□□ 0.19
PDE1B-207ENST00000550620 KIAA0391O15091 583 aaKnown RBP16.26■□□□□ 0.19
PDE1B-207ENST00000550620 PHF2O75151 1096 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 KRT13P13646 458 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 ATP2B4P23634 1241 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 MMP14P50281 582 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 SPIRE1Q08AE8 756 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 DRAP1Q14919 205 aaPredicted RBP16.26■□□□□ 0.19
PDE1B-207ENST00000550620 NFIL3Q16649 462 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 TAOK1Q7L7X3 1001 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 KCTD17Q8N5Z5 321 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 ETNPPLQ8TBG4 499 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 GPR101Q96P66 508 aaPredicted RBP16.26■□□□□ 0.19
PDE1B-207ENST00000550620 MKNK1Q9BUB5 465 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 TMEM109Q9BVC6 243 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 TAOK3Q9H2K8 898 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 AZI2Q9H6S1 392 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 LRRC4CQ9HCJ2 640 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 OLFML3Q9NRN5 406 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.26■□□□□ 0.19
PDE1B-207ENST00000550620 DNAJC12Q9UKB3 198 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 TRPC6Q9Y210 931 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 MEIS1O00470 390 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 CLIC2O15247 247 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 EIF3DO15371 548 aaKnown RBP eCLIP16.26■□□□□ 0.19
PDE1B-207ENST00000550620 UFL1O94874 794 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 TNFAIP3P21580 790 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 PSMC6P62333 389 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 PICALMQ13492 652 aa16.26■□□□□ 0.19
PDE1B-207ENST00000550620 SLMAPQ14BN4 828 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms