RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 KANK2Q63ZY3 851 aa6.46□□□□□ -1.38
LIMA1-205ENST00000550592 TCEAL8Q8IYN2 117 aa6.46□□□□□ -1.38
LIMA1-205ENST00000550592 MYO1HQ8N1T3 1032 aa6.46□□□□□ -1.38
LIMA1-205ENST00000550592 TTLL6Q8N841 843 aa6.46□□□□□ -1.38
LIMA1-205ENST00000550592 KYQ8NBH2 561 aa6.46□□□□□ -1.38
LIMA1-205ENST00000550592 FBXO15Q8NCQ5 510 aaPredicted RBP6.46□□□□□ -1.38
LIMA1-205ENST00000550592 RELTQ969Z4 430 aa6.46□□□□□ -1.38
LIMA1-205ENST00000550592 TEKT5Q96M29 485 aa6.46□□□□□ -1.38
LIMA1-205ENST00000550592 CLIC6Q96NY7 704 aa6.46□□□□□ -1.38
LIMA1-205ENST00000550592 QRSL1Q9H0R6 528 aaKnown RBP6.46□□□□□ -1.38
LIMA1-205ENST00000550592 KCTD10Q9H3F6 313 aa6.46□□□□□ -1.38
LIMA1-205ENST00000550592 KCND1Q9NSA2 647 aa6.46□□□□□ -1.38
LIMA1-205ENST00000550592 ZFP69BQ9UJL9 534 aa6.46□□□□□ -1.38
LIMA1-205ENST00000550592 PNMA8BQ9ULN7 279 aaPredicted RBP6.46□□□□□ -1.38
LIMA1-205ENST00000550592 EDARQ9UNE0 448 aa6.46□□□□□ -1.38
LIMA1-205ENST00000550592 CHGBP05060 677 aa6.45□□□□□ -1.38
LIMA1-205ENST00000550592 TAL1P17542 331 aaPredicted RBP6.45□□□□□ -1.38
LIMA1-205ENST00000550592 GLRBP48167 497 aa6.45□□□□□ -1.38
LIMA1-205ENST00000550592 DLG4P78352 724 aa6.45□□□□□ -1.38
LIMA1-205ENST00000550592 TRIM25Q14258 630 aaKnown RBP6.45□□□□□ -1.38
LIMA1-205ENST00000550592 ACAP2Q15057 778 aa6.45□□□□□ -1.38
LIMA1-205ENST00000550592 MUM1Q2TAK8 710 aa6.45□□□□□ -1.38
LIMA1-205ENST00000550592 CXorf57Q6NSI4 855 aaKnown RBP6.45□□□□□ -1.38
LIMA1-205ENST00000550592 STK32CQ86UX6 486 aa6.45□□□□□ -1.38
LIMA1-205ENST00000550592 WDR48Q8TAF3 677 aa6.45□□□□□ -1.38
LIMA1-205ENST00000550592 NOX5Q96PH1 765 aa6.45□□□□□ -1.38
LIMA1-205ENST00000550592 WRNIP1Q96S55 665 aa6.45□□□□□ -1.38
LIMA1-205ENST00000550592 NUP88Q99567 741 aaPredicted RBP6.45□□□□□ -1.38
LIMA1-205ENST00000550592 TACO1Q9BSH4 297 aaKnown RBP6.45□□□□□ -1.38
LIMA1-205ENST00000550592 MTG2Q9H4K7 406 aa6.45□□□□□ -1.38
LIMA1-205ENST00000550592 KCMF1Q9P0J7 381 aa6.45□□□□□ -1.38
LIMA1-205ENST00000550592 FTSJ1Q9UET6 329 aa6.45□□□□□ -1.38
LIMA1-205ENST00000550592 PRSS50Q9UI38 385 aa6.45□□□□□ -1.38
LIMA1-205ENST00000550592 INVSQ9Y283 1065 aa6.45□□□□□ -1.38
LIMA1-205ENST00000550592 OPHN1O60890 802 aa6.44□□□□□ -1.38
LIMA1-205ENST00000550592 PF4V1P10720 104 aa6.44□□□□□ -1.38
LIMA1-205ENST00000550592 VCAM1P19320 739 aa6.44□□□□□ -1.38
LIMA1-205ENST00000550592 GPR15P49685 360 aa6.44□□□□□ -1.38
LIMA1-205ENST00000550592 SLC5A3P53794 718 aa6.44□□□□□ -1.38
LIMA1-205ENST00000550592 LGALS4P56470 323 aa6.44□□□□□ -1.38
LIMA1-205ENST00000550592 HTRA3P83110 453 aa6.44□□□□□ -1.38
LIMA1-205ENST00000550592 PHF19Q5T6S3 580 aa6.44□□□□□ -1.38
LIMA1-205ENST00000550592 BMP8AQ7Z5Y6 402 aa6.44□□□□□ -1.38
LIMA1-205ENST00000550592 WDR75Q8IWA0 830 aaKnown RBP6.44□□□□□ -1.38
LIMA1-205ENST00000550592 STPG3Q8N7X2 389 aa6.44□□□□□ -1.38
LIMA1-205ENST00000550592 AUTS2Q8WXX7 1259 aa6.44□□□□□ -1.38
LIMA1-205ENST00000550592 KCNN1Q92952 543 aa6.44□□□□□ -1.38
LIMA1-205ENST00000550592 HSPBAP1Q96EW2 488 aa6.44□□□□□ -1.38
LIMA1-205ENST00000550592 CUTAO60888 179 aa6.43□□□□□ -1.38
LIMA1-205ENST00000550592 CYP7B1O75881 506 aa6.43□□□□□ -1.38
LIMA1-205ENST00000550592 PCDH8O95206 1070 aa6.43□□□□□ -1.38
LIMA1-205ENST00000550592 ZRANB2O95218 330 aaKnown RBP eCLIP6.43□□□□□ -1.38
LIMA1-205ENST00000550592 KNG1P01042 644 aa6.43□□□□□ -1.38
LIMA1-205ENST00000550592 CT47B1P0C2W7 299 aaPredicted RBP6.43□□□□□ -1.38
LIMA1-205ENST00000550592 U2AF1L5P0DN76 240 aaPredicted RBP6.43□□□□□ -1.38
LIMA1-205ENST00000550592 U2AF1Q01081 240 aaKnown RBP eCLIP6.43□□□□□ -1.38
LIMA1-205ENST00000550592 CD83Q01151 205 aa6.43□□□□□ -1.38
LIMA1-205ENST00000550592 ANO4Q32M45 955 aa6.43□□□□□ -1.38
LIMA1-205ENST00000550592 CCDC178Q5BJE1 867 aa6.43□□□□□ -1.38
LIMA1-205ENST00000550592 MAGEB6Q8N7X4 407 aa6.43□□□□□ -1.38
LIMA1-205ENST00000550592 CDYL2Q8N8U2 506 aa6.43□□□□□ -1.38
LIMA1-205ENST00000550592 OR14C36Q8NHC7 312 aa6.43□□□□□ -1.38
LIMA1-205ENST00000550592 TTC8Q8TAM2 541 aa6.43□□□□□ -1.38
LIMA1-205ENST00000550592 TSPEARQ8WU66 669 aa6.43□□□□□ -1.38
LIMA1-205ENST00000550592 HAPLN2Q9GZV7 340 aa6.43□□□□□ -1.38
LIMA1-205ENST00000550592 DPP7Q9UHL4 492 aa6.43□□□□□ -1.38
LIMA1-205ENST00000550592 PCDHB6Q9Y5E3 794 aa6.43□□□□□ -1.38
LIMA1-205ENST00000550592 CDY2AQ9Y6F7 541 aa6.43□□□□□ -1.38
LIMA1-205ENST00000550592 LAMC3Q9Y6N6 1575 aa6.43□□□□□ -1.38
LIMA1-205ENST00000550592 KIF3BO15066 747 aa6.42□□□□□ -1.38
LIMA1-205ENST00000550592 PRPF3O43395 683 aaKnown RBP6.42□□□□□ -1.38
LIMA1-205ENST00000550592 CELA3BP08861 270 aa6.42□□□□□ -1.38
LIMA1-205ENST00000550592 COL6A1P12109 1028 aa6.42□□□□□ -1.38
LIMA1-205ENST00000550592 OSMP13725 252 aa6.42□□□□□ -1.38
LIMA1-205ENST00000550592 C5AR1P21730 350 aa6.42□□□□□ -1.38
LIMA1-205ENST00000550592 CYP2C19P33261 490 aa6.42□□□□□ -1.38
LIMA1-205ENST00000550592 LIMS1P48059 325 aa6.42□□□□□ -1.38
LIMA1-205ENST00000550592 GTF2H3Q13889 308 aa6.42□□□□□ -1.38
LIMA1-205ENST00000550592 SPIDRQ14159 915 aa6.42□□□□□ -1.38
LIMA1-205ENST00000550592 MLC1Q15049 377 aa6.42□□□□□ -1.38
LIMA1-205ENST00000550592 PRR31Q5SQ13 230 aa6.42□□□□□ -1.38
LIMA1-205ENST00000550592 C14orf80Q86SX3 495 aa6.42□□□□□ -1.38
LIMA1-205ENST00000550592 TPH2Q8IWU9 490 aa6.42□□□□□ -1.38
LIMA1-205ENST00000550592 TMEFF1Q8IYR6 380 aa6.42□□□□□ -1.38
LIMA1-205ENST00000550592 FBXO41Q8TF61 875 aa6.42□□□□□ -1.38
LIMA1-205ENST00000550592 GAB3Q8WWW8 586 aa6.42□□□□□ -1.38
LIMA1-205ENST00000550592 ZBTB8AQ96BR9 441 aa6.42□□□□□ -1.38
LIMA1-205ENST00000550592 SIGLEC10Q96LC7 697 aa6.42□□□□□ -1.38
LIMA1-205ENST00000550592 ZSWIM3Q96MP5 696 aa6.42□□□□□ -1.38
LIMA1-205ENST00000550592 SLC2A13Q96QE2 648 aa6.42□□□□□ -1.38
LIMA1-205ENST00000550592 IFT122Q9HBG6 1241 aa6.42□□□□□ -1.38
LIMA1-205ENST00000550592 NOB1Q9ULX3 412 aaKnown RBP6.42□□□□□ -1.38
LIMA1-205ENST00000550592 USP18Q9UMW8 372 aa6.42□□□□□ -1.38
LIMA1-205ENST00000550592 MRC2Q9UBG0 1479 aa6.41□□□□□ -1.38
LIMA1-205ENST00000550592 GOLGA6CA6NDK9 693 aa6.41□□□□□ -1.38
LIMA1-205ENST00000550592 GOLGA6BA6NDN3 693 aa6.41□□□□□ -1.38
LIMA1-205ENST00000550592 ETV2O00321 342 aaPredicted RBP6.41□□□□□ -1.38
LIMA1-205ENST00000550592 NDUFS2O75306 463 aa6.41□□□□□ -1.38
LIMA1-205ENST00000550592 IL33O95760 270 aa6.41□□□□□ -1.38
LIMA1-205ENST00000550592 GOLGA6DP0CG33 693 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms