RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 SETBP1Q9Y6X0 1596 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 FSCBQ5H9T9 825 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 KRT27Q7Z3Y8 459 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 NFU1Q9UMS0 254 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 STK36Q9NRP7 1315 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 TTLL6Q8N841 843 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 CEP19Q96LK0 163 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 MXD3Q9BW11 206 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 BRIP1Q9BX63 1249 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 ASNSD1Q9NWL6 643 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 ZNF212Q9UDV6 495 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 METP08581 1390 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 LRRC7Q96NW7 1537 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 MCAMP43121 646 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 PPP1R18Q6NYC8 613 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 OR6B3Q8NGW1 331 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 ABCB11O95342 1321 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 CPSF1Q10570 1443 aaKnown RBP13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 PALMO75781 387 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 CDC25AP30304 524 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 PRELPP51888 382 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 SH3RF3Q8TEJ3 882 aaPredicted RBP13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 FAM49AQ9H0Q0 323 aaPredicted RBP13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 BBS9Q3SYG4 887 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 ACAD11Q709F0 780 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 BANK1Q8NDB2 785 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 BHMT2Q9H2M3 363 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 ALKQ9UM73 1620 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 MFAP3LO75121 409 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 NR3C1P04150 777 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 ATXN8OSP0DMR3 200 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 NOP14P78316 857 aaKnown RBP13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 OSBP2Q969R2 916 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 EXOC4Q96A65 974 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 MRPL40Q9NQ50 206 aaKnown RBP13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 ABHD10Q9NUJ1 306 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 HABP4Q5JVS0 413 aaKnown RBP13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 NUP85Q9BW27 656 aa13.36□□□□□ -0.27
RAB3IP-212ENST00000550536 CCDC188H7C350 402 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 NSUN2Q08J23 767 aaKnown RBP eCLIP13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 MAPK6Q16659 721 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 LRRC31Q6UY01 552 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 CATSPER4Q7RTX7 472 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 MB21D1Q8N884 522 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 ZNF579Q8NAF0 562 aaKnown RBP13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 L3MBTL1Q9Y468 752 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 CFLARO15519 480 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 GCOM2Q9BZD3 368 aaPredicted RBP13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 PLAAQ9Y263 795 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 KRT38O76015 456 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 ORC2Q13416 577 aaPredicted RBP13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 TBC1D9BQ66K14 1250 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 TWF2Q6IBS0 349 aaKnown RBP13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 TTC13Q8NBP0 860 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 TTC8Q8TAM2 541 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 NGRNQ9NPE2 291 aaKnown RBP13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 ATP5HO75947 161 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 MMEP08473 750 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 TMPRSS15P98073 1019 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 SCG3Q8WXD2 468 aaKnown RBP13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 ALKBH8Q96BT7 664 aaKnown RBP13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 BPIFA3Q9BQP9 254 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 GINM1Q9NU53 330 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 COPEO14579 308 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 HDLBPQ00341 1268 aaKnown RBP13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 CAPRIN1Q14444 709 aaKnown RBP13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 GDAQ9Y2T3 454 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 RASA4BC9J798 803 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 RASA4O43374 803 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 MORF4L2Q15014 288 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 ZNF568Q3ZCX4 644 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 CLEC4GQ6UXB4 293 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 PASD1Q8IV76 773 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 TRPV6Q9H1D0 765 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 TMEM60Q9H2L4 133 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 ADAM22Q9P0K1 906 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 E5RI56 91 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 HUS1O60921 280 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 CASP8Q14790 479 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 TBCCQ15814 346 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 MASTLQ96GX5 879 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 ANTXR1Q9H6X2 564 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 ERBB3P21860 1342 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 WDR19Q8NEZ3 1342 aa13.35□□□□□ -0.27
RAB3IP-212ENST00000550536 PTPN21Q16825 1174 aa13.34□□□□□ -0.27
RAB3IP-212ENST00000550536 ALKBH5Q6P6C2 394 aaKnown RBP13.34□□□□□ -0.27
RAB3IP-212ENST00000550536 FOXP4Q8IVH2 680 aaPredicted RBP13.34□□□□□ -0.27
RAB3IP-212ENST00000550536 AFG1LQ8WV93 481 aa13.34□□□□□ -0.27
RAB3IP-212ENST00000550536 HOXC10Q9NYD6 342 aa13.34□□□□□ -0.27
RAB3IP-212ENST00000550536 COPS2P61201 443 aa13.34□□□□□ -0.27
RAB3IP-212ENST00000550536 SAYSD1Q9NPB0 183 aa13.34□□□□□ -0.27
RAB3IP-212ENST00000550536 GOLGA8IPA6NC78 632 aa13.34□□□□□ -0.27
RAB3IP-212ENST00000550536 GOLGA8JA6NMD2 632 aa13.34□□□□□ -0.27
RAB3IP-212ENST00000550536 MIF4GDA9UHW6 222 aaKnown RBP13.34□□□□□ -0.27
RAB3IP-212ENST00000550536 AP1ARQ63HQ0 302 aa13.34□□□□□ -0.27
RAB3IP-212ENST00000550536 TMEM270Q6UE05 265 aa13.34□□□□□ -0.27
RAB3IP-212ENST00000550536 PARD6BQ9BYG5 372 aa13.34□□□□□ -0.27
RAB3IP-212ENST00000550536 APOBEC2Q9Y235 224 aaKnown RBP13.34□□□□□ -0.27
RAB3IP-212ENST00000550536 HEY1Q9Y5J3 304 aa13.34□□□□□ -0.27
RAB3IP-212ENST00000550536 UBE4BO95155 1302 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms