RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 TRPC3Q13507 836 aa11□□□□□ -0.65
SMARCC2-209ENST00000550164 GRAPQ13588 217 aa11□□□□□ -0.65
SMARCC2-209ENST00000550164 HP1BP3Q5SSJ5 553 aaPredicted RBP11□□□□□ -0.65
SMARCC2-209ENST00000550164 RNF207Q6ZRF8 634 aa11□□□□□ -0.65
SMARCC2-209ENST00000550164 GRAPLQ8TC17 118 aaPredicted RBP11□□□□□ -0.65
SMARCC2-209ENST00000550164 CAVIN3Q969G5 261 aa11□□□□□ -0.65
SMARCC2-209ENST00000550164 GBP5Q96PP8 586 aa11□□□□□ -0.65
SMARCC2-209ENST00000550164 ANAPC7Q9UJX3 599 aa11□□□□□ -0.65
SMARCC2-209ENST00000550164 TPX2Q9ULW0 747 aaKnown RBP11□□□□□ -0.65
SMARCC2-209ENST00000550164 SUFUQ9UMX1 484 aa11□□□□□ -0.65
SMARCC2-209ENST00000550164 HNRNPDLO14979 420 aaKnown RBP11□□□□□ -0.65
SMARCC2-209ENST00000550164 TOM1O60784 492 aa11□□□□□ -0.65
SMARCC2-209ENST00000550164 CAMTA2O94983 1202 aa11□□□□□ -0.65
SMARCC2-209ENST00000550164 ALAS1P13196 640 aa11□□□□□ -0.65
SMARCC2-209ENST00000550164 MAN1A1P33908 653 aa11□□□□□ -0.65
SMARCC2-209ENST00000550164 CFAP157Q5JU67 520 aa11□□□□□ -0.65
SMARCC2-209ENST00000550164 AP1ARQ63HQ0 302 aa11□□□□□ -0.65
SMARCC2-209ENST00000550164 CCHCR1Q8TD31 782 aa11□□□□□ -0.65
SMARCC2-209ENST00000550164 RAPGEF5Q92565 580 aa11□□□□□ -0.65
SMARCC2-209ENST00000550164 CHORDC1Q9UHD1 332 aaPredicted RBP11□□□□□ -0.65
SMARCC2-209ENST00000550164 SGK1O00141 431 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 STAMBPO95630 424 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 NTSR2O95665 410 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 BMP3P12645 472 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 TTMPQ5BVD1 217 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 AGBL2Q5U5Z8 902 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 VGLL2Q8N8G2 317 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 ZNF507Q8TCN5 953 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 SPDL1Q96EA4 605 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 ACCSQ96QU6 501 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 MED15Q96RN5 788 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 TGS1Q96RS0 853 aaKnown RBP10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 YIPF3Q9GZM5 350 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 INTS2Q9H0H0 1204 aaKnown RBP10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 CNOT8Q9UFF9 292 aaKnown RBP10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 C3P01024 1663 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 ARHGAP42A6NI28 874 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 EPHB6O15197 1021 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 MYBP10242 640 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 KCNJ1P48048 391 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 SLC29A2Q14542 456 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 KCTD19Q17RG1 926 aaPredicted RBP10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 KIF2BQ8N4N8 673 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 CCDC110Q8TBZ0 833 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 CALR3Q96L12 384 aaKnown RBP10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 REEP2Q9BRK0 252 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 INTUQ9ULD6 942 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 MRPL11Q9Y3B7 192 aaKnown RBP10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 PHBP35232 272 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 LONRF1Q17RB8 773 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 PHLDB3Q6NSJ2 640 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 TRIM59Q8IWR1 403 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 NKX2-3Q8TAU0 364 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 DDX23Q9BUQ8 820 aaKnown RBP10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 TMBIM4Q9HC24 238 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 WTIPA6NIX2 430 aaPredicted RBP10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 CCT8L1PA6NM43 557 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 PDXKO00764 312 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 KCNQ2O43526 872 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 DIAPH2O60879 1101 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 RPS6KA5O75582 802 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 LIG4P49917 911 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 DHX34Q14147 1143 aaKnown RBP10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 RCN2Q14257 317 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 NKX1-1Q15270 411 aaPredicted RBP10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 IL17AQ16552 155 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 RASIP1Q5U651 963 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 FBXO33Q7Z6M2 555 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 JAMLQ86YT9 394 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 IRF2BP1Q8IU81 584 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 FERMT1Q9BQL6 677 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 ADAM33Q9BZ11 813 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 WDR11Q9BZH6 1224 aa10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 TTC7AQ9ULT0 858 aaPredicted RBP10.99□□□□□ -0.65
SMARCC2-209ENST00000550164 PEAK1Q9H792 1746 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 PDHA1P08559 390 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 ITGA4P13612 1032 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 DYNLT1P63172 113 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 SYDE2Q5VT97 1194 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 FAM196AQ6ZSG2 479 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 APBB1IPQ7Z5R6 666 aaPredicted RBP10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 MSL3Q8N5Y2 521 aaKnown RBP10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 PDCD7Q8N8D1 485 aaKnown RBP10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 TPCN2Q8NHX9 752 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 ZNF564Q8TBZ8 553 aaPredicted RBP10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 SYN2Q92777 582 aaPredicted RBP10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 HAUS1Q96CS2 278 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 DYDC2Q96IM9 177 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 TSNARE1Q96NA8 513 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 ERP44Q9BS26 406 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 NUP85Q9BW27 656 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 SAYSD1Q9NPB0 183 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 CFAP73A6NFT4 308 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 PDHBP11177 359 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 FXR2P51116 673 aaKnown RBP eCLIP10.98□□□□□ -0.655e-7■■■■■ 28.4
SMARCC2-209ENST00000550164 DMP1Q13316 513 aaPredicted RBP10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 TRPM8Q7Z2W7 1104 aa10.98□□□□□ -0.65
SMARCC2-209ENST00000550164 LRP10Q7Z4F1 713 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms