RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 TMC3Q7Z5M5 1100 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 OLIG1Q8TAK6 271 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 ETNPPLQ8TBG4 499 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 U2AF1L4Q8WU68 220 aaKnown RBP11.19□□□□□ -0.62
ERBB3-214ENST00000550070 SLC35C1Q96A29 364 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 VTI1AQ96AJ9 217 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 HES6Q96HZ4 224 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 MBOAT7Q96N66 472 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 VCPKMTQ9H867 229 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 DDX20Q9UHI6 824 aaKnown RBP11.19□□□□□ -0.62
ERBB3-214ENST00000550070 SERPINB13Q9UIV8 391 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 NOVA2Q9UNW9 492 aaKnown RBP11.19□□□□□ -0.62
ERBB3-214ENST00000550070 NR2E1Q9Y466 385 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 PCDHA1Q9Y5I3 950 aa11.19□□□□□ -0.62
ERBB3-214ENST00000550070 ASTN1O14525 1302 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 A0A0A6YYK5 440 aaPredicted RBP11.18□□□□□ -0.62
ERBB3-214ENST00000550070 SLC26A4O43511 780 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 CALUO43852 315 aaPredicted RBP11.18□□□□□ -0.62
ERBB3-214ENST00000550070 GFPT2O94808 682 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 TRIM37O94972 964 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 NR3C1P04150 777 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 RBM5P52756 815 aaKnown RBP eCLIP11.18□□□□□ -0.624e-6■■□□□ 11.6
ERBB3-214ENST00000550070 GALCP54803 685 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 PRR16Q569H4 304 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 PRR5LQ6MZQ0 368 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 RUFY4Q6ZNE9 571 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 SLFN12Q8IYM2 578 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 LNX1Q8TBB1 728 aaPredicted RBP11.18□□□□□ -0.62
ERBB3-214ENST00000550070 TBC1D22AQ8WUA7 517 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 LMBR1Q8WVP7 490 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 SEC14L1Q92503 715 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 DPH5Q9H2P9 285 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 IKZF4Q9H2S9 585 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 SLITRK6Q9H5Y7 841 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 OSGEPQ9NPF4 335 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 GCNT4Q9P109 453 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 DNM3Q9UQ16 869 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 MEIS2O14770 477 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 BACH1O14867 736 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 BDNFP23560 247 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 USP8P40818 1118 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 PPP2R2AP63151 447 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 POU5F1Q01860 360 aaKnown RBP11.18□□□□□ -0.62
ERBB3-214ENST00000550070 ODF2Q5BJF6 829 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 AGBL2Q5U5Z8 902 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 CCDC13Q8IYE1 715 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 CCDC26Q8TAB7 109 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 TBC1D16Q8TBP0 767 aa11.18□□□□□ -0.62
ERBB3-214ENST00000550070 TPX2Q9ULW0 747 aaKnown RBP11.18□□□□□ -0.62
ERBB3-214ENST00000550070 CCDC189A1A4V9 331 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 RPA1P27694 616 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 DHX9Q08211 1270 aaKnown RBP11.17□□□□□ -0.62
ERBB3-214ENST00000550070 MTMR3Q13615 1198 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 SPRED3Q2MJR0 410 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 SLC30A5Q8TAD4 765 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 CRYGNQ8WXF5 182 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 RAPGEF5Q92565 580 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 PMM1Q92871 262 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 TRIM51Q9BSJ1 452 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 TYW1Q9NV66 732 aaKnown RBP11.17□□□□□ -0.62
ERBB3-214ENST00000550070 TRPC5Q9UL62 973 aaPredicted RBP11.17□□□□□ -0.62
ERBB3-214ENST00000550070 INTUQ9ULD6 942 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 PCDHB13Q9Y5F0 798 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 BTAF1O14981 1849 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 ATP8B3O60423 1300 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 FAM170AA1A519 330 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 F8VZ95 297 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 PPP1R12AO14974 1030 aaPredicted RBP11.17□□□□□ -0.62
ERBB3-214ENST00000550070 BUB1BO60566 1050 aaPredicted RBP11.17□□□□□ -0.62
ERBB3-214ENST00000550070 FGGP02679 453 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 ANXA13P27216 316 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 NPEPPSP55786 919 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 MAGOHP61326 146 aaKnown RBP11.17□□□□□ -0.62
ERBB3-214ENST00000550070 ARHGAP4P98171 946 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 TRAPPC3LQ5T215 181 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 DCAF12L1Q5VU92 463 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 VPS36Q86VN1 386 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 SYCE1Q8N0S2 351 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 MAGOHBQ96A72 148 aaKnown RBP11.17□□□□□ -0.62
ERBB3-214ENST00000550070 LENG9Q96B70 501 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 TRIM31Q9BZY9 425 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 AMFRQ9UKV5 643 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 PPP1R9AQ9ULJ8 1098 aa11.17□□□□□ -0.62
ERBB3-214ENST00000550070 SFI1A8K8P3 1242 aa11.16□□□□□ -0.62
ERBB3-214ENST00000550070 EVI5O60447 810 aa11.16□□□□□ -0.62
ERBB3-214ENST00000550070 GCNT3O95395 438 aa11.16□□□□□ -0.62
ERBB3-214ENST00000550070 SNAP25P60880 206 aa11.16□□□□□ -0.62
ERBB3-214ENST00000550070 CYP4A11Q02928 519 aa11.16□□□□□ -0.62
ERBB3-214ENST00000550070 DDR1Q08345 913 aa11.16□□□□□ -0.62
ERBB3-214ENST00000550070 BYSLQ13895 437 aaKnown RBP11.16□□□□□ -0.62
ERBB3-214ENST00000550070 BMT2Q1RMZ1 405 aa11.16□□□□□ -0.62
ERBB3-214ENST00000550070 SHROOM1Q2M3G4 852 aaPredicted RBP11.16□□□□□ -0.62
ERBB3-214ENST00000550070 LRCH2Q5VUJ6 765 aa11.16□□□□□ -0.62
ERBB3-214ENST00000550070 SLC35G2Q8TBE7 412 aa11.16□□□□□ -0.62
ERBB3-214ENST00000550070 ATP8B4Q8TF62 1192 aa11.16□□□□□ -0.62
ERBB3-214ENST00000550070 RUSC1Q9BVN2 902 aa11.16□□□□□ -0.62
ERBB3-214ENST00000550070 MXD3Q9BW11 206 aa11.16□□□□□ -0.62
ERBB3-214ENST00000550070 OSBPL7Q9BZF2 842 aa11.16□□□□□ -0.62
ERBB3-214ENST00000550070 UTP11Q9Y3A2 253 aaKnown RBP11.16□□□□□ -0.62
ERBB3-214ENST00000550070 GREB1LQ9C091 1923 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms