RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 ERVK-5Q9HDB9 667 aa13.26□□□□□ -0.29
PFDN5-208ENST00000549995 DDX19AQ9NUU7 478 aaKnown RBP13.26□□□□□ -0.29
PFDN5-208ENST00000549995 KCND2Q9NZV8 630 aa13.26□□□□□ -0.29
PFDN5-208ENST00000549995 CXXC1Q9P0U4 656 aaPredicted RBP13.26□□□□□ -0.29
PFDN5-208ENST00000549995 RCOR1Q9UKL0 485 aa13.26□□□□□ -0.29
PFDN5-208ENST00000549995 AKT3Q9Y243 479 aa13.26□□□□□ -0.29
PFDN5-208ENST00000549995 COL4A3BPQ9Y5P4 624 aa13.26□□□□□ -0.29
PFDN5-208ENST00000549995 CHD9Q3L8U1 2897 aa13.26□□□□□ -0.29
PFDN5-208ENST00000549995 RALGAPA2Q2PPJ7 1873 aa13.25□□□□□ -0.29
PFDN5-208ENST00000549995 SPTLC2O15270 562 aa13.25□□□□□ -0.29
PFDN5-208ENST00000549995 DARSP14868 501 aaKnown RBP13.25□□□□□ -0.29
PFDN5-208ENST00000549995 EIF4BP23588 611 aaKnown RBP13.25□□□□□ -0.29
PFDN5-208ENST00000549995 NLRP11P59045 1033 aaKnown RBP13.25□□□□□ -0.29
PFDN5-208ENST00000549995 NUCB2P80303 420 aa13.25□□□□□ -0.29
PFDN5-208ENST00000549995 TMEM62Q0P6H9 643 aa13.25□□□□□ -0.29
PFDN5-208ENST00000549995 MXD4Q14582 209 aaPredicted RBP13.25□□□□□ -0.29
PFDN5-208ENST00000549995 STK38Q15208 465 aa13.25□□□□□ -0.29
PFDN5-208ENST00000549995 PCBP1Q15365 356 aaKnown RBP eCLIP13.25□□□□□ -0.29
PFDN5-208ENST00000549995 KIZQ2M2Z5 673 aa13.25□□□□□ -0.29
PFDN5-208ENST00000549995 ODR4Q5SWX8 454 aa13.25□□□□□ -0.29
PFDN5-208ENST00000549995 AXDND1Q5T1B0 1012 aaPredicted RBP13.25□□□□□ -0.29
PFDN5-208ENST00000549995 TRMT1LQ7Z2T5 733 aaKnown RBP13.25□□□□□ -0.29
PFDN5-208ENST00000549995 FAM228AQ86W67 206 aa13.25□□□□□ -0.29
PFDN5-208ENST00000549995 CRIPAKQ8N1N5 446 aa13.25□□□□□ -0.29
PFDN5-208ENST00000549995 SYT2Q8N9I0 419 aaPredicted RBP13.25□□□□□ -0.29
PFDN5-208ENST00000549995 KCNG4Q8TDN1 519 aa13.25□□□□□ -0.29
PFDN5-208ENST00000549995 LINC01599Q8WXQ3 324 aa13.25□□□□□ -0.29
PFDN5-208ENST00000549995 TIPINQ9BVW5 301 aa13.25□□□□□ -0.29
PFDN5-208ENST00000549995 BHMT2Q9H2M3 363 aa13.25□□□□□ -0.29
PFDN5-208ENST00000549995 SUGCTQ9HAC7 445 aa13.25□□□□□ -0.29
PFDN5-208ENST00000549995 IFT122Q9HBG6 1241 aa13.25□□□□□ -0.29
PFDN5-208ENST00000549995 BLOC1S4Q9NUP1 217 aa13.25□□□□□ -0.29
PFDN5-208ENST00000549995 SUCLA2Q9P2R7 463 aaPredicted RBP13.25□□□□□ -0.29
PFDN5-208ENST00000549995 CFAP45Q9UL16 551 aa13.25□□□□□ -0.29
PFDN5-208ENST00000549995 CIZ1Q9ULV3 898 aaPredicted RBP13.25□□□□□ -0.29
PFDN5-208ENST00000549995 PADI3Q9ULW8 664 aa13.25□□□□□ -0.29
PFDN5-208ENST00000549995 DNM3Q9UQ16 869 aa13.25□□□□□ -0.29
PFDN5-208ENST00000549995 NOC2LQ9Y3T9 749 aaKnown RBP13.25□□□□□ -0.29
PFDN5-208ENST00000549995 ATP6V1DQ9Y5K8 247 aa13.25□□□□□ -0.29
PFDN5-208ENST00000549995 LAMA2P24043 3122 aaKnown RBP13.24□□□□□ -0.29
PFDN5-208ENST00000549995 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.24□□□□□ -0.29
PFDN5-208ENST00000549995 E9PMD0 336 aa13.24□□□□□ -0.29
PFDN5-208ENST00000549995 GUCY2CP25092 1073 aa13.24□□□□□ -0.29
PFDN5-208ENST00000549995 MARCKSP29966 332 aaPredicted RBP13.24□□□□□ -0.29
PFDN5-208ENST00000549995 UBA7P41226 1012 aa13.24□□□□□ -0.29
PFDN5-208ENST00000549995 SLC12A3P55017 1021 aa13.24□□□□□ -0.29
PFDN5-208ENST00000549995 DNM1Q05193 864 aaKnown RBP13.24□□□□□ -0.29
PFDN5-208ENST00000549995 IKBKEQ14164 716 aa13.24□□□□□ -0.29
PFDN5-208ENST00000549995 DSC3Q14574 896 aa13.24□□□□□ -0.29
PFDN5-208ENST00000549995 CDCA2Q69YH5 1023 aaPredicted RBP13.24□□□□□ -0.29
PFDN5-208ENST00000549995 PADI6Q6TGC4 694 aa13.24□□□□□ -0.29
PFDN5-208ENST00000549995 C1orf186Q6ZWK4 172 aa13.24□□□□□ -0.29
PFDN5-208ENST00000549995 OTOP2Q7RTS6 562 aa13.24□□□□□ -0.29
PFDN5-208ENST00000549995 PRPF31Q8WWY3 499 aaKnown RBP13.24□□□□□ -0.29
PFDN5-208ENST00000549995 SYMPKQ92797 1274 aaKnown RBP13.24□□□□□ -0.29
PFDN5-208ENST00000549995 OSMRQ99650 979 aa13.24□□□□□ -0.29
PFDN5-208ENST00000549995 TSPYL2Q9H2G4 693 aaPredicted RBP13.24□□□□□ -0.29
PFDN5-208ENST00000549995 TMX1Q9H3N1 280 aa13.24□□□□□ -0.29
PFDN5-208ENST00000549995 FNDC1Q4ZHG4 1894 aaPredicted RBP13.24□□□□□ -0.29
PFDN5-208ENST00000549995 KIAA1671Q9BY89 1806 aa13.23□□□□□ -0.29
PFDN5-208ENST00000549995 TMEM265A0A087WTH1 108 aa13.23□□□□□ -0.29
PFDN5-208ENST00000549995 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.23□□□□□ -0.29
PFDN5-208ENST00000549995 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.23□□□□□ -0.29
PFDN5-208ENST00000549995 ARHGEF35A5YM69 484 aa13.23□□□□□ -0.29
PFDN5-208ENST00000549995 USO1O60763 962 aaKnown RBP13.23□□□□□ -0.29
PFDN5-208ENST00000549995 CUTAO60888 179 aa13.23□□□□□ -0.29
PFDN5-208ENST00000549995 RPS6KA5O75582 802 aa13.23□□□□□ -0.29
PFDN5-208ENST00000549995 GLRA2P23416 452 aa13.23□□□□□ -0.29
PFDN5-208ENST00000549995 CD52P31358 61 aa13.23□□□□□ -0.29
PFDN5-208ENST00000549995 FXR1P51114 621 aaKnown RBP eCLIP13.23□□□□□ -0.29
PFDN5-208ENST00000549995 PTENP60484 403 aa13.23□□□□□ -0.29
PFDN5-208ENST00000549995 LAMTOR4Q0VGL1 99 aa13.23□□□□□ -0.29
PFDN5-208ENST00000549995 MAPK7Q13164 816 aa13.23□□□□□ -0.29
PFDN5-208ENST00000549995 PAK2Q13177 524 aa13.23□□□□□ -0.29
PFDN5-208ENST00000549995 CAPSQ13938 189 aa13.23□□□□□ -0.29
PFDN5-208ENST00000549995 RINT1Q6NUQ1 792 aa13.23□□□□□ -0.29
PFDN5-208ENST00000549995 USP49Q70CQ1 688 aa13.23□□□□□ -0.29
PFDN5-208ENST00000549995 SRGAP1Q7Z6B7 1085 aa13.23□□□□□ -0.29
PFDN5-208ENST00000549995 RHPN2Q8IUC4 686 aa13.23□□□□□ -0.29
PFDN5-208ENST00000549995 ASAP3Q8TDY4 903 aa13.23□□□□□ -0.29
PFDN5-208ENST00000549995 TMEM143Q96AN5 459 aa13.23□□□□□ -0.29
PFDN5-208ENST00000549995 CALML4Q96GE6 196 aa13.23□□□□□ -0.29
PFDN5-208ENST00000549995 EPSTI1Q96J88 318 aa13.23□□□□□ -0.29
PFDN5-208ENST00000549995 CLIC6Q96NY7 704 aa13.23□□□□□ -0.29
PFDN5-208ENST00000549995 TRAIPQ9BWF2 469 aa13.23□□□□□ -0.29
PFDN5-208ENST00000549995 GCOM2Q9BZD3 368 aaPredicted RBP13.23□□□□□ -0.29
PFDN5-208ENST00000549995 INO80BQ9C086 356 aaPredicted RBP13.23□□□□□ -0.29
PFDN5-208ENST00000549995 RC3H2Q9HBD1 1191 aaKnown RBP13.23□□□□□ -0.29
PFDN5-208ENST00000549995 STK17AQ9UEE5 414 aa13.23□□□□□ -0.29
PFDN5-208ENST00000549995 DAXXQ9UER7 740 aaPredicted RBP13.23□□□□□ -0.29
PFDN5-208ENST00000549995 NLRC5Q86WI3 1866 aa13.23□□□□□ -0.29
PFDN5-208ENST00000549995 SZT2Q5T011 3432 aa13.22□□□□□ -0.29
PFDN5-208ENST00000549995 A0A087WWV3 80 aa13.22□□□□□ -0.29
PFDN5-208ENST00000549995 A0A087WZ62 844 aa13.22□□□□□ -0.29
PFDN5-208ENST00000549995 FAM237AA0A1B0GTK4 181 aa13.22□□□□□ -0.29
PFDN5-208ENST00000549995 SOX1O00570 391 aaPredicted RBP13.22□□□□□ -0.29
PFDN5-208ENST00000549995 GPR182O15218 404 aa13.22□□□□□ -0.29
PFDN5-208ENST00000549995 SLC34A2O95436 690 aa13.22□□□□□ -0.29
PFDN5-208ENST00000549995 PLCG1P19174 1290 aa13.22□□□□□ -0.29
PFDN5-208ENST00000549995 KRT85P78386 507 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms