RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 SMTNP53814 917 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 TBC1D8BQ0IIM8 1120 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 DMP1Q13316 513 aaPredicted RBP13.31□□□□□ -0.28
PTPRR-209ENST00000549308 KRT31Q15323 416 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 DGKDQ16760 1214 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 ZCWPW2Q504Y3 356 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 TLK2Q86UE8 772 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 KSR1Q8IVT5 923 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 EXOC8Q8IYI6 725 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 TRIB2Q92519 343 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 TRIM44Q96DX7 344 aaPredicted RBP13.31□□□□□ -0.28
PTPRR-209ENST00000549308 CEP89Q96ST8 783 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 C17orf75Q9HAS0 396 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 KMT5AQ9NQR1 393 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 TYW1Q9NV66 732 aaKnown RBP13.31□□□□□ -0.28
PTPRR-209ENST00000549308 NRBP1Q9UHY1 535 aa13.31□□□□□ -0.28
PTPRR-209ENST00000549308 ZNF215Q9UL58 517 aaPredicted RBP13.31□□□□□ -0.28
PTPRR-209ENST00000549308 GNEQ9Y223 722 aaKnown RBP13.31□□□□□ -0.28
PTPRR-209ENST00000549308 GPR25O00155 361 aa13.3□□□□□ -0.28
PTPRR-209ENST00000549308 PDXKO00764 312 aa13.3□□□□□ -0.28
PTPRR-209ENST00000549308 TPM2P07951 284 aa13.3□□□□□ -0.28
PTPRR-209ENST00000549308 AKR1A1P14550 325 aa13.3□□□□□ -0.28
PTPRR-209ENST00000549308 MTIF2P46199 727 aaKnown RBP13.3□□□□□ -0.28
PTPRR-209ENST00000549308 NPTX2P47972 431 aa13.3□□□□□ -0.28
PTPRR-209ENST00000549308 NCKAP1LP55160 1127 aa13.3□□□□□ -0.28
PTPRR-209ENST00000549308 RTP1P59025 263 aa13.3□□□□□ -0.28
PTPRR-209ENST00000549308 FKBP3Q00688 224 aaKnown RBP13.3□□□□□ -0.28
PTPRR-209ENST00000549308 EDRF1Q3B7T1 1238 aa13.3□□□□□ -0.28
PTPRR-209ENST00000549308 HAUS6Q7Z4H7 955 aa13.3□□□□□ -0.28
PTPRR-209ENST00000549308 IRF2BP1Q8IU81 584 aa13.3□□□□□ -0.28
PTPRR-209ENST00000549308 SYCP3Q8IZU3 236 aa13.3□□□□□ -0.28
PTPRR-209ENST00000549308 SPIRE2Q8WWL2 714 aa13.3□□□□□ -0.28
PTPRR-209ENST00000549308 TMEM143Q96AN5 459 aa13.3□□□□□ -0.28
PTPRR-209ENST00000549308 LENG1Q96BZ8 264 aaPredicted RBP13.3□□□□□ -0.28
PTPRR-209ENST00000549308 CNOT6LQ96LI5 555 aaKnown RBP13.3□□□□□ -0.28
PTPRR-209ENST00000549308 NAP1L5Q96NT1 182 aaPredicted RBP13.3□□□□□ -0.28
PTPRR-209ENST00000549308 ACCSQ96QU6 501 aa13.3□□□□□ -0.28
PTPRR-209ENST00000549308 TAB2Q9NYJ8 693 aa13.3□□□□□ -0.28
PTPRR-209ENST00000549308 MAFO75444 373 aaPredicted RBP13.29□□□□□ -0.28
PTPRR-209ENST00000549308 CNGA1P29973 690 aa13.29□□□□□ -0.28
PTPRR-209ENST00000549308 HOXD13P35453 343 aa13.29□□□□□ -0.28
PTPRR-209ENST00000549308 COPB1P53618 953 aaKnown RBP13.29□□□□□ -0.28
PTPRR-209ENST00000549308 CAP1Q01518 475 aa13.29□□□□□ -0.28
PTPRR-209ENST00000549308 KCNA1Q09470 495 aa13.29□□□□□ -0.28
PTPRR-209ENST00000549308 BRDTQ58F21 947 aaPredicted RBP13.29□□□□□ -0.28
PTPRR-209ENST00000549308 ZNF484Q5JVG2 852 aa13.29□□□□□ -0.28
PTPRR-209ENST00000549308 TCP11Q8WWU5 503 aa13.29□□□□□ -0.28
PTPRR-209ENST00000549308 BSNDQ8WZ55 320 aa13.29□□□□□ -0.28
PTPRR-209ENST00000549308 EEF2KMTQ96G04 330 aa13.29□□□□□ -0.28
PTPRR-209ENST00000549308 CEP63Q96MT8 703 aa13.29□□□□□ -0.28
PTPRR-209ENST00000549308 JPH2Q9BR39 696 aaPredicted RBP13.29□□□□□ -0.28
PTPRR-209ENST00000549308 C16orf70Q9BSU1 422 aa13.29□□□□□ -0.28
PTPRR-209ENST00000549308 STRA6Q9BX79 667 aa13.29□□□□□ -0.28
PTPRR-209ENST00000549308 VPS16Q9H269 839 aa13.29□□□□□ -0.28
PTPRR-209ENST00000549308 RNPEPQ9H4A4 650 aa13.29□□□□□ -0.28
PTPRR-209ENST00000549308 ST6GALNAC4Q9H4F1 302 aa13.29□□□□□ -0.28
PTPRR-209ENST00000549308 TMEM206Q9H813 350 aa13.29□□□□□ -0.28
PTPRR-209ENST00000549308 SRRDQ9UH36 339 aa13.29□□□□□ -0.28
PTPRR-209ENST00000549308 KCNG1Q9UIX4 513 aa13.29□□□□□ -0.28
PTPRR-209ENST00000549308 TRAF3IP3Q9Y228 551 aa13.29□□□□□ -0.28
PTPRR-209ENST00000549308 Q9Y3F1 56 aa13.29□□□□□ -0.28
PTPRR-209ENST00000549308 CASP8AP2Q9UKL3 1982 aa13.29□□□□□ -0.28
PTPRR-209ENST00000549308 ZMYM2Q9UBW7 1377 aa13.29□□□□□ -0.28
PTPRR-209ENST00000549308 A0A1B0GTH6 734 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 A6NJR5 290 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 H0YCG3 227 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 H3BRB1 525 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 N4BP3O15049 544 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 CETN3O15182 167 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 GAS2O43903 313 aaKnown RBP13.28□□□□□ -0.28
PTPRR-209ENST00000549308 PPP1R37O75864 691 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 HOXD8P13378 290 aaPredicted RBP13.28□□□□□ -0.28
PTPRR-209ENST00000549308 CYBAP13498 195 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 ARL2P36404 184 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 CPT1AP50416 773 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 IGBP1P78318 339 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 GTF2BQ00403 316 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 ADAM9Q13443 819 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 PPP2R5AQ15172 486 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 CCDC40Q4G0X9 1142 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 LRRC55Q6ZSA7 311 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 HS2ST1Q7LGA3 356 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 APTXQ7Z2E3 356 aaKnown RBP13.28□□□□□ -0.28
PTPRR-209ENST00000549308 TMC6Q7Z403 805 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 FILIP1Q7Z7B0 1213 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 TRPV1Q8NER1 839 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 ASAP3Q8TDY4 903 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 TRAPPC12Q8WVT3 735 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 HVCN1Q96D96 273 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 ERO1AQ96HE7 468 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 TUT1Q9H6E5 874 aaKnown RBP13.28□□□□□ -0.28
PTPRR-209ENST00000549308 SUGCTQ9HAC7 445 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 SAGE1Q9NXZ1 904 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 EXOC7Q9UPT5 735 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 COL1A2P08123 1366 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 ZBTB42B2RXF5 422 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 PES1O00541 588 aaKnown RBP13.28□□□□□ -0.28
PTPRR-209ENST00000549308 CLIC2O15247 247 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 TGFB1I1O43294 461 aa13.28□□□□□ -0.28
PTPRR-209ENST00000549308 FKTNO75072 461 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms