RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 IRF9Q00978 393 aa6.82□□□□□ -1.32
CNOT2-215ENST00000548863 ARHGAP44Q17R89 818 aa6.82□□□□□ -1.32
CNOT2-215ENST00000548863 TMEM177Q53S58 311 aa6.82□□□□□ -1.32
CNOT2-215ENST00000548863 C2orf69Q8N8R5 385 aa6.82□□□□□ -1.32
CNOT2-215ENST00000548863 NKD2Q969F2 451 aaPredicted RBP6.82□□□□□ -1.32
CNOT2-215ENST00000548863 ARMC5Q96C12 935 aa6.82□□□□□ -1.32
CNOT2-215ENST00000548863 HIRIP3Q9BW71 556 aaPredicted RBP6.82□□□□□ -1.32
CNOT2-215ENST00000548863 BOCQ9BWV1 1114 aa6.82□□□□□ -1.32
CNOT2-215ENST00000548863 MRPL4Q9BYD3 311 aaKnown RBP6.82□□□□□ -1.32
CNOT2-215ENST00000548863 DENND2AQ9ULE3 1009 aa6.82□□□□□ -1.32
CNOT2-215ENST00000548863 REXO2Q9Y3B8 237 aaKnown RBP6.82□□□□□ -1.32
CNOT2-215ENST00000548863 C2orf78A6NCI8 922 aa6.81□□□□□ -1.32
CNOT2-215ENST00000548863 MAN2A2P49641 1150 aa6.81□□□□□ -1.32
CNOT2-215ENST00000548863 TOB2Q14106 344 aaPredicted RBP6.81□□□□□ -1.32
CNOT2-215ENST00000548863 NAALADL2Q58DX5 795 aa6.81□□□□□ -1.32
CNOT2-215ENST00000548863 ABHD17CQ6PCB6 329 aa6.81□□□□□ -1.32
CNOT2-215ENST00000548863 HTR3DQ70Z44 454 aa6.81□□□□□ -1.32
CNOT2-215ENST00000548863 DNAJC10Q8IXB1 793 aa6.81□□□□□ -1.32
CNOT2-215ENST00000548863 GCDHQ92947 438 aaPredicted RBP6.81□□□□□ -1.32
CNOT2-215ENST00000548863 GPRC5BQ9NZH0 403 aa6.81□□□□□ -1.32
CNOT2-215ENST00000548863 SFMBT1Q9UHJ3 866 aa6.81□□□□□ -1.32
CNOT2-215ENST00000548863 PCSK5Q92824 1860 aa6.81□□□□□ -1.32
CNOT2-215ENST00000548863 XDHP47989 1333 aa6.8□□□□□ -1.32
CNOT2-215ENST00000548863 TRAF5O00463 557 aa6.8□□□□□ -1.32
CNOT2-215ENST00000548863 FOXN1O15353 648 aa6.8□□□□□ -1.32
CNOT2-215ENST00000548863 RAMP2O60895 175 aa6.8□□□□□ -1.32
CNOT2-215ENST00000548863 PRLP01236 227 aa6.8□□□□□ -1.32
CNOT2-215ENST00000548863 STAT3P40763 770 aa6.8□□□□□ -1.32
CNOT2-215ENST00000548863 MECP2P51608 486 aaKnown RBP6.8□□□□□ -1.32
CNOT2-215ENST00000548863 RBL2Q08999 1139 aa6.8□□□□□ -1.32
CNOT2-215ENST00000548863 FAM111BQ6SJ93 734 aa6.8□□□□□ -1.32
CNOT2-215ENST00000548863 Q6ZRM9 215 aa6.8□□□□□ -1.32
CNOT2-215ENST00000548863 GSPT2Q8IYD1 628 aaKnown RBP6.8□□□□□ -1.32
CNOT2-215ENST00000548863 ZG16BQ96DA0 208 aa6.8□□□□□ -1.32
CNOT2-215ENST00000548863 PPP1R1BQ9UD71 204 aaPredicted RBP6.8□□□□□ -1.32
CNOT2-215ENST00000548863 TMEM191CA6NGB0 347 aa6.79□□□□□ -1.32
CNOT2-215ENST00000548863 PPFIA2O75334 1257 aa6.79□□□□□ -1.32
CNOT2-215ENST00000548863 TGM1P22735 817 aa6.79□□□□□ -1.32
CNOT2-215ENST00000548863 ANTXR2P58335 489 aa6.79□□□□□ -1.32
CNOT2-215ENST00000548863 ROM1Q03395 351 aa6.79□□□□□ -1.32
CNOT2-215ENST00000548863 COL10A1Q03692 680 aa6.79□□□□□ -1.32
CNOT2-215ENST00000548863 CNGB1Q14028 1251 aaPredicted RBP6.79□□□□□ -1.32
CNOT2-215ENST00000548863 DGKDQ16760 1214 aa6.79□□□□□ -1.32
CNOT2-215ENST00000548863 GAREM2Q75VX8 874 aa6.79□□□□□ -1.32
CNOT2-215ENST00000548863 IGSF22Q8N9C0 903 aa6.79□□□□□ -1.32
CNOT2-215ENST00000548863 ANKRD53Q8N9V6 530 aa6.79□□□□□ -1.32
CNOT2-215ENST00000548863 OR5AN1Q8NGI8 311 aa6.79□□□□□ -1.32
CNOT2-215ENST00000548863 MAML3Q96JK9 1138 aa6.79□□□□□ -1.32
CNOT2-215ENST00000548863 DEPDC7Q96QD5 511 aa6.79□□□□□ -1.32
CNOT2-215ENST00000548863 TANGO6Q9C0B7 1094 aa6.79□□□□□ -1.32
CNOT2-215ENST00000548863 TRIM39Q9HCM9 518 aa6.79□□□□□ -1.32
CNOT2-215ENST00000548863 KCMF1Q9P0J7 381 aa6.79□□□□□ -1.32
CNOT2-215ENST00000548863 FAM221BA6H8Z2 402 aa6.78□□□□□ -1.32
CNOT2-215ENST00000548863 PTGS2P35354 604 aa6.78□□□□□ -1.32
CNOT2-215ENST00000548863 BPIFB4P59827 614 aa6.78□□□□□ -1.32
CNOT2-215ENST00000548863 TCIRG1Q13488 830 aa6.78□□□□□ -1.32
CNOT2-215ENST00000548863 BRAPQ7Z569 592 aa6.78□□□□□ -1.32
CNOT2-215ENST00000548863 CLEC14AQ86T13 490 aa6.78□□□□□ -1.32
CNOT2-215ENST00000548863 ZSWIM2Q8NEG5 633 aa6.78□□□□□ -1.32
CNOT2-215ENST00000548863 ERCC4Q92889 916 aaPredicted RBP6.78□□□□□ -1.32
CNOT2-215ENST00000548863 RPL10LQ96L21 214 aaKnown RBP6.78□□□□□ -1.32
CNOT2-215ENST00000548863 HAPLN2Q9GZV7 340 aa6.78□□□□□ -1.32
CNOT2-215ENST00000548863 ACSS2Q9NR19 701 aa6.78□□□□□ -1.32
CNOT2-215ENST00000548863 SNTG2Q9NY99 539 aa6.78□□□□□ -1.32
CNOT2-215ENST00000548863 RBM8AQ9Y5S9 174 aaKnown RBP6.78□□□□□ -1.32
CNOT2-215ENST00000548863 RGS3P49796 1198 aa6.77□□□□□ -1.33
CNOT2-215ENST00000548863 RABGGTBP53611 331 aa6.77□□□□□ -1.33
CNOT2-215ENST00000548863 SMAD3P84022 425 aaKnown RBP6.77□□□□□ -1.33
CNOT2-215ENST00000548863 SLC6A3Q01959 620 aa6.77□□□□□ -1.33
CNOT2-215ENST00000548863 ACAP1Q15027 740 aa6.77□□□□□ -1.33
CNOT2-215ENST00000548863 ELAVL1Q15717 326 aaKnown RBP6.77□□□□□ -1.33
CNOT2-215ENST00000548863 MFSD5Q6N075 450 aa6.77□□□□□ -1.33
CNOT2-215ENST00000548863 BMP8AQ7Z5Y6 402 aa6.77□□□□□ -1.33
CNOT2-215ENST00000548863 FGD2Q7Z6J4 655 aa6.77□□□□□ -1.33
CNOT2-215ENST00000548863 MRGPREQ86SM8 312 aa6.77□□□□□ -1.33
CNOT2-215ENST00000548863 RPUSD2Q8IZ73 545 aaKnown RBP6.77□□□□□ -1.33
CNOT2-215ENST00000548863 THAP3Q8WTV1 239 aaPredicted RBP6.77□□□□□ -1.33
CNOT2-215ENST00000548863 MKL1Q969V6 931 aa6.77□□□□□ -1.33
CNOT2-215ENST00000548863 CRAMP1Q96RY5 1269 aa6.77□□□□□ -1.33
CNOT2-215ENST00000548863 TCF25Q9BQ70 676 aa6.77□□□□□ -1.33
CNOT2-215ENST00000548863 IL23AQ9NPF7 189 aa6.77□□□□□ -1.33
CNOT2-215ENST00000548863 UBE2QL1A1L167 161 aa6.76□□□□□ -1.33
CNOT2-215ENST00000548863 CYP17A1P05093 508 aa6.76□□□□□ -1.33
CNOT2-215ENST00000548863 VSIG10L2P0DP72 767 aa6.76□□□□□ -1.33
CNOT2-215ENST00000548863 LAIR1Q6GTX8 287 aa6.76□□□□□ -1.33
CNOT2-215ENST00000548863 RHOUQ7L0Q8 258 aa6.76□□□□□ -1.33
CNOT2-215ENST00000548863 PLA2G15Q8NCC3 412 aa6.76□□□□□ -1.33
CNOT2-215ENST00000548863 HAS1Q92839 578 aa6.76□□□□□ -1.33
CNOT2-215ENST00000548863 LENG9Q96B70 501 aa6.76□□□□□ -1.33
CNOT2-215ENST00000548863 DNAJC7Q99615 494 aa6.76□□□□□ -1.33
CNOT2-215ENST00000548863 TTPALQ9BTX7 342 aa6.76□□□□□ -1.33
CNOT2-215ENST00000548863 GPR87Q9BY21 358 aa6.76□□□□□ -1.33
CNOT2-215ENST00000548863 KLRG2A4D1S0 409 aaPredicted RBP6.75□□□□□ -1.33
CNOT2-215ENST00000548863 B4E1Z4 1266 aa6.75□□□□□ -1.33
CNOT2-215ENST00000548863 JUNP05412 331 aaKnown RBP6.75□□□□□ -1.33
CNOT2-215ENST00000548863 RABL3Q5HYI8 236 aa6.75□□□□□ -1.33
CNOT2-215ENST00000548863 FKBP15Q5T1M5 1219 aa6.75□□□□□ -1.33
CNOT2-215ENST00000548863 NAIF1Q69YI7 327 aaPredicted RBP6.75□□□□□ -1.33
CNOT2-215ENST00000548863 SLFN12LQ6IEE8 588 aa6.75□□□□□ -1.33
CNOT2-215ENST00000548863 NME9Q86XW9 330 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms