RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 RIN1Q13671 783 aa6.09□□□□□ -1.43
CCDC38-206ENST00000548771 EPHA7Q15375 998 aa6.09□□□□□ -1.43
CCDC38-206ENST00000548771 NRN1LQ496H8 165 aa6.09□□□□□ -1.43
CCDC38-206ENST00000548771 C1orf210Q8IVY1 113 aa6.09□□□□□ -1.43
CCDC38-206ENST00000548771 CACTINQ8WUQ7 758 aaKnown RBP6.09□□□□□ -1.43
CCDC38-206ENST00000548771 SLC6A15Q9H2J7 730 aa6.09□□□□□ -1.43
CCDC38-206ENST00000548771 TLR9Q9NR96 1032 aa6.09□□□□□ -1.43
CCDC38-206ENST00000548771 SAE1Q9UBE0 346 aaPredicted RBP6.09□□□□□ -1.43
CCDC38-206ENST00000548771 UBA6A0AVT1 1052 aaPredicted RBP6.08□□□□□ -1.44
CCDC38-206ENST00000548771 KRTAP23-1A1A580 65 aa6.08□□□□□ -1.44
CCDC38-206ENST00000548771 NARSO43776 548 aaKnown RBP6.08□□□□□ -1.44
CCDC38-206ENST00000548771 OPA1O60313 960 aa6.08□□□□□ -1.44
CCDC38-206ENST00000548771 KRT37O76014 449 aa6.08□□□□□ -1.44
CCDC38-206ENST00000548771 SESN2P58004 480 aaPredicted RBP6.08□□□□□ -1.44
CCDC38-206ENST00000548771 DGCR2P98153 550 aa6.08□□□□□ -1.44
CCDC38-206ENST00000548771 ATP2C1P98194 919 aaPredicted RBP6.08□□□□□ -1.44
CCDC38-206ENST00000548771 ROM1Q03395 351 aa6.08□□□□□ -1.44
CCDC38-206ENST00000548771 ACAP1Q15027 740 aa6.08□□□□□ -1.44
CCDC38-206ENST00000548771 CDCA2Q69YH5 1023 aaPredicted RBP6.08□□□□□ -1.44
CCDC38-206ENST00000548771 KANSL1Q7Z3B3 1105 aa6.08□□□□□ -1.44
CCDC38-206ENST00000548771 KIAA1958Q8N8K9 716 aa6.08□□□□□ -1.44
CCDC38-206ENST00000548771 OR5AN1Q8NGI8 311 aa6.08□□□□□ -1.44
CCDC38-206ENST00000548771 GFM2Q969S9 779 aaKnown RBP6.08□□□□□ -1.44
CCDC38-206ENST00000548771 GPHA2Q96T91 129 aa6.08□□□□□ -1.44
CCDC38-206ENST00000548771 MPHOSPH9Q99550 1183 aa6.08□□□□□ -1.44
CCDC38-206ENST00000548771 ZNF341Q9BYN7 854 aa6.08□□□□□ -1.44
CCDC38-206ENST00000548771 INTS7Q9NVH2 962 aaKnown RBP6.08□□□□□ -1.44
CCDC38-206ENST00000548771 KCMF1Q9P0J7 381 aa6.08□□□□□ -1.44
CCDC38-206ENST00000548771 C11orf21Q9P2W6 132 aa6.08□□□□□ -1.44
CCDC38-206ENST00000548771 MAGEL2Q9UJ55 1249 aa6.08□□□□□ -1.44
CCDC38-206ENST00000548771 DENND2AQ9ULE3 1009 aa6.08□□□□□ -1.44
CCDC38-206ENST00000548771 FAM184BQ9ULE4 1060 aa6.08□□□□□ -1.44
CCDC38-206ENST00000548771 H2AFYO75367 372 aaKnown RBP6.07□□□□□ -1.44
CCDC38-206ENST00000548771 C1SP09871 688 aa6.07□□□□□ -1.44
CCDC38-206ENST00000548771 HIBADHP31937 336 aaKnown RBP6.07□□□□□ -1.44
CCDC38-206ENST00000548771 PTH1RQ03431 593 aa6.07□□□□□ -1.44
CCDC38-206ENST00000548771 PABPC4Q13310 644 aaKnown RBP eCLIP6.07□□□□□ -1.44
CCDC38-206ENST00000548771 FHL2Q14192 279 aa6.07□□□□□ -1.44
CCDC38-206ENST00000548771 MYBPC3Q14896 1274 aa6.07□□□□□ -1.44
CCDC38-206ENST00000548771 DGKDQ16760 1214 aa6.07□□□□□ -1.44
CCDC38-206ENST00000548771 TTC38Q5R3I4 469 aa6.07□□□□□ -1.44
CCDC38-206ENST00000548771 PIK3R6Q5UE93 754 aa6.07□□□□□ -1.44
CCDC38-206ENST00000548771 SLC7A6OSQ96CW6 309 aaPredicted RBP6.07□□□□□ -1.44
CCDC38-206ENST00000548771 MRFAP1L1Q96HT8 127 aa6.07□□□□□ -1.44
CCDC38-206ENST00000548771 PITHD1Q9GZP4 211 aaPredicted RBP6.07□□□□□ -1.44
CCDC38-206ENST00000548771 CABP5Q9NP86 173 aa6.07□□□□□ -1.44
CCDC38-206ENST00000548771 CEP72Q9P209 647 aa6.07□□□□□ -1.44
CCDC38-206ENST00000548771 SH3BP1Q9Y3L3 701 aa6.07□□□□□ -1.44
CCDC38-206ENST00000548771 JMJD7P0C870 316 aa6.06□□□□□ -1.44
CCDC38-206ENST00000548771 POU3F2P20265 443 aaPredicted RBP6.06□□□□□ -1.44
CCDC38-206ENST00000548771 STAT3P40763 770 aa6.06□□□□□ -1.44
CCDC38-206ENST00000548771 CCDC144BQ3MJ40 725 aa6.06□□□□□ -1.44
CCDC38-206ENST00000548771 FNDC7Q5VTL7 733 aa6.06□□□□□ -1.44
CCDC38-206ENST00000548771 SLFN12LQ6IEE8 588 aa6.06□□□□□ -1.44
CCDC38-206ENST00000548771 ESRP1Q6NXG1 681 aaKnown RBP6.06□□□□□ -1.44
CCDC38-206ENST00000548771 BMP8AQ7Z5Y6 402 aa6.06□□□□□ -1.44
CCDC38-206ENST00000548771 CLEC14AQ86T13 490 aa6.06□□□□□ -1.44
CCDC38-206ENST00000548771 NME9Q86XW9 330 aa6.06□□□□□ -1.44
CCDC38-206ENST00000548771 KIF18BQ86Y91 864 aa6.06□□□□□ -1.44
CCDC38-206ENST00000548771 SYNPOQ8N3V7 929 aa6.06□□□□□ -1.44
CCDC38-206ENST00000548771 AMER2Q8N7J2 671 aa6.06□□□□□ -1.44
CCDC38-206ENST00000548771 ELF4Q99607 663 aaPredicted RBP6.06□□□□□ -1.44
CCDC38-206ENST00000548771 AURKAIP1Q9NWT8 199 aaPredicted RBP6.06□□□□□ -1.44
CCDC38-206ENST00000548771 SPO11Q9Y5K1 396 aa6.06□□□□□ -1.44
CCDC38-206ENST00000548771 H7C1D1 291 aa6.05□□□□□ -1.44
CCDC38-206ENST00000548771 ASMTLO95671 621 aa6.05□□□□□ -1.44
CCDC38-206ENST00000548771 SLC9A1P19634 815 aa6.05□□□□□ -1.44
CCDC38-206ENST00000548771 LSM12Q3MHD2 195 aaKnown RBP6.05□□□□□ -1.44
CCDC38-206ENST00000548771 TMPRSS6Q8IU80 811 aa6.05□□□□□ -1.44
CCDC38-206ENST00000548771 D2HGDHQ8N465 521 aa6.05□□□□□ -1.44
CCDC38-206ENST00000548771 RNPC3Q96LT9 517 aaKnown RBP6.05□□□□□ -1.44
CCDC38-206ENST00000548771 MTFR1LQ9H019 292 aa6.05□□□□□ -1.44
CCDC38-206ENST00000548771 PIF1Q9H611 641 aa6.05□□□□□ -1.44
CCDC38-206ENST00000548771 ZSWIM4Q9H7M6 989 aa6.05□□□□□ -1.44
CCDC38-206ENST00000548771 MAGEC2Q9UBF1 373 aaPredicted RBP6.05□□□□□ -1.44
CCDC38-206ENST00000548771 A0A0A6YYJ9 748 aa6.04□□□□□ -1.44
CCDC38-206ENST00000548771 ATP2A2P16615 1042 aaKnown RBP6.04□□□□□ -1.44
CCDC38-206ENST00000548771 BCAR1P56945 870 aa6.04□□□□□ -1.44
CCDC38-206ENST00000548771 ADCY1Q08828 1119 aa6.04□□□□□ -1.44
CCDC38-206ENST00000548771 ZNF174Q15697 407 aa6.04□□□□□ -1.44
CCDC38-206ENST00000548771 GAGE13Q4V321 117 aa6.04□□□□□ -1.44
CCDC38-206ENST00000548771 UBE2R2Q712K3 238 aaPredicted RBP6.04□□□□□ -1.44
CCDC38-206ENST00000548771 SGMS1Q86VZ5 419 aa6.04□□□□□ -1.44
CCDC38-206ENST00000548771 TMEM176AQ96HP8 235 aa6.04□□□□□ -1.44
CCDC38-206ENST00000548771 DRC1Q96MC2 740 aa6.04□□□□□ -1.44
CCDC38-206ENST00000548771 PCIF1Q9H4Z3 704 aa6.04□□□□□ -1.44
CCDC38-206ENST00000548771 OXSMQ9NWU1 459 aa6.04□□□□□ -1.44
CCDC38-206ENST00000548771 PCSK5Q92824 1860 aa6.04□□□□□ -1.44
CCDC38-206ENST00000548771 A0A0A6YYK5 440 aaPredicted RBP6.03□□□□□ -1.44
CCDC38-206ENST00000548771 FLT3P36888 993 aa6.03□□□□□ -1.44
CCDC38-206ENST00000548771 TGFB2P61812 414 aa6.03□□□□□ -1.44
CCDC38-206ENST00000548771 DSG1Q02413 1049 aa6.03□□□□□ -1.44
CCDC38-206ENST00000548771 TCIRG1Q13488 830 aa6.03□□□□□ -1.44
CCDC38-206ENST00000548771 CFAP100Q494V2 611 aa6.03□□□□□ -1.44
CCDC38-206ENST00000548771 THEMISQ8N1K5 641 aaPredicted RBP6.03□□□□□ -1.44
CCDC38-206ENST00000548771 ANKRD53Q8N9V6 530 aa6.03□□□□□ -1.44
CCDC38-206ENST00000548771 PLA2G15Q8NCC3 412 aa6.03□□□□□ -1.44
CCDC38-206ENST00000548771 PPP1R14CQ8TAE6 165 aa6.03□□□□□ -1.44
CCDC38-206ENST00000548771 UBXN4Q92575 508 aa6.03□□□□□ -1.44
CCDC38-206ENST00000548771 PLEKHG4BQ96PX9 1271 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms