RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 TNFRSF25Q93038 417 aa12.77□□□□□ -0.37
BEST3-209ENST00000548658 GCOM2Q9BZD3 368 aaPredicted RBP12.77□□□□□ -0.37
BEST3-209ENST00000548658 NSUN3Q9H649 340 aaKnown RBP12.77□□□□□ -0.37
BEST3-209ENST00000548658 ATP6V0A4Q9HBG4 840 aa12.77□□□□□ -0.37
BEST3-209ENST00000548658 SH2B1Q9NRF2 756 aaPredicted RBP12.77□□□□□ -0.37
BEST3-209ENST00000548658 TMEM161AQ9NX61 479 aa12.77□□□□□ -0.37
BEST3-209ENST00000548658 DACT1Q9NYF0 836 aa12.77□□□□□ -0.37
BEST3-209ENST00000548658 VAV3Q9UKW4 847 aa12.77□□□□□ -0.37
BEST3-209ENST00000548658 PCDHA12Q9UN75 941 aa12.77□□□□□ -0.37
BEST3-209ENST00000548658 WDR81Q562E7 1941 aa12.77□□□□□ -0.37
BEST3-209ENST00000548658 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.76□□□□□ -0.37
BEST3-209ENST00000548658 BTBD18B2RXH4 712 aa12.76□□□□□ -0.37
BEST3-209ENST00000548658 EML1O00423 815 aa12.76□□□□□ -0.37
BEST3-209ENST00000548658 STBD1O95210 358 aa12.76□□□□□ -0.37
BEST3-209ENST00000548658 LINC00271P0C7V0 271 aa12.76□□□□□ -0.37
BEST3-209ENST00000548658 DARSP14868 501 aaKnown RBP12.76□□□□□ -0.37
BEST3-209ENST00000548658 HMGN5P82970 282 aaKnown RBP12.76□□□□□ -0.37
BEST3-209ENST00000548658 CSPP1Q1MSJ5 1256 aa12.76□□□□□ -0.37
BEST3-209ENST00000548658 PUS10Q3MIT2 529 aaKnown RBP12.76□□□□□ -0.37
BEST3-209ENST00000548658 ANO5Q75V66 913 aa12.76□□□□□ -0.37
BEST3-209ENST00000548658 ZNF410Q86VK4 478 aa12.76□□□□□ -0.37
BEST3-209ENST00000548658 C4orf19Q8IY42 314 aa12.76□□□□□ -0.37
BEST3-209ENST00000548658 DIS3L2Q8IYB7 885 aaKnown RBP12.76□□□□□ -0.37
BEST3-209ENST00000548658 PPP2R3CQ969Q6 453 aa12.76□□□□□ -0.37
BEST3-209ENST00000548658 PPP1R16BQ96T49 567 aa12.76□□□□□ -0.37
BEST3-209ENST00000548658 UHRF1Q96T88 793 aaPredicted RBP12.76□□□□□ -0.37
BEST3-209ENST00000548658 ZSWIM4Q9H7M6 989 aa12.76□□□□□ -0.37
BEST3-209ENST00000548658 CYP26B1Q9NR63 512 aa12.76□□□□□ -0.37
BEST3-209ENST00000548658 CHST12Q9NRB3 414 aa12.76□□□□□ -0.37
BEST3-209ENST00000548658 PLAGL2Q9UPG8 496 aa12.76□□□□□ -0.37
BEST3-209ENST00000548658 PCDHB12Q9Y5F1 795 aa12.76□□□□□ -0.37
BEST3-209ENST00000548658 RBAK-RBAKDNI3L0D1 243 aa12.75□□□□□ -0.37
BEST3-209ENST00000548658 GAS2O43903 313 aaKnown RBP12.75□□□□□ -0.37
BEST3-209ENST00000548658 MGEA5O60502 916 aa12.75□□□□□ -0.37
BEST3-209ENST00000548658 JAK2O60674 1132 aa12.75□□□□□ -0.37
BEST3-209ENST00000548658 EOMESO95936 686 aa12.75□□□□□ -0.37
BEST3-209ENST00000548658 SFPQP23246 707 aaKnown RBP eCLIP12.75□□□□□ -0.37
BEST3-209ENST00000548658 RFC5P40937 340 aa12.75□□□□□ -0.37
BEST3-209ENST00000548658 COL4A4P53420 1690 aaPredicted RBP12.75□□□□□ -0.37
BEST3-209ENST00000548658 DSC3Q14574 896 aa12.75□□□□□ -0.37
BEST3-209ENST00000548658 CALCRLQ16602 461 aa12.75□□□□□ -0.37
BEST3-209ENST00000548658 NLRC5Q86WI3 1866 aa12.75□□□□□ -0.37
BEST3-209ENST00000548658 NEK9Q8TD19 979 aa12.75□□□□□ -0.37
BEST3-209ENST00000548658 RSPH1Q8WYR4 309 aa12.75□□□□□ -0.37
BEST3-209ENST00000548658 CEP170P1Q96L14 293 aa12.75□□□□□ -0.37
BEST3-209ENST00000548658 CEP89Q96ST8 783 aa12.75□□□□□ -0.37
BEST3-209ENST00000548658 UBE2ZQ9H832 354 aaPredicted RBP12.75□□□□□ -0.37
BEST3-209ENST00000548658 SUCLA2Q9P2R7 463 aaPredicted RBP12.75□□□□□ -0.37
BEST3-209ENST00000548658 MRPL42Q9Y6G3 142 aaKnown RBP12.75□□□□□ -0.37
BEST3-209ENST00000548658 A0A0U1RQF3 1178 aa12.74□□□□□ -0.37
BEST3-209ENST00000548658 TBKBP1A7MCY6 615 aa12.74□□□□□ -0.37
BEST3-209ENST00000548658 GRM6O15303 877 aa12.74□□□□□ -0.37
BEST3-209ENST00000548658 ASAP2O43150 1006 aa12.74□□□□□ -0.37
BEST3-209ENST00000548658 NEMFO60524 1076 aa12.74□□□□□ -0.37
BEST3-209ENST00000548658 SKIP12755 728 aa12.74□□□□□ -0.37
BEST3-209ENST00000548658 YWHABP31946 246 aaKnown RBP12.74□□□□□ -0.37
BEST3-209ENST00000548658 RBM25P49756 843 aaKnown RBP12.74□□□□□ -0.37
BEST3-209ENST00000548658 KCNQ1P51787 676 aa12.74□□□□□ -0.37
BEST3-209ENST00000548658 POLGP54098 1239 aaPredicted RBP12.74□□□□□ -0.37
BEST3-209ENST00000548658 UBE3AQ05086 875 aa12.74□□□□□ -0.37
BEST3-209ENST00000548658 LEXMQ3ZCV2 418 aa12.74□□□□□ -0.37
BEST3-209ENST00000548658 C8orf34Q49A92 452 aa12.74□□□□□ -0.37
BEST3-209ENST00000548658 PAN2Q504Q3 1202 aaKnown RBP12.74□□□□□ -0.37
BEST3-209ENST00000548658 EARS2Q5JPH6 523 aaKnown RBP12.74□□□□□ -0.37
BEST3-209ENST00000548658 SPOUT1Q5T280 376 aaKnown RBP12.74□□□□□ -0.37
BEST3-209ENST00000548658 NCAPH2Q6IBW4 605 aa12.74□□□□□ -0.37
BEST3-209ENST00000548658 RHPN2Q8IUC4 686 aa12.74□□□□□ -0.37
BEST3-209ENST00000548658 ABI1Q8IZP0 508 aa12.74□□□□□ -0.37
BEST3-209ENST00000548658 FAM184AQ8NB25 1140 aa12.74□□□□□ -0.37
BEST3-209ENST00000548658 TCP11Q8WWU5 503 aa12.74□□□□□ -0.37
BEST3-209ENST00000548658 PABPC5Q96DU9 382 aaKnown RBP12.74□□□□□ -0.37
BEST3-209ENST00000548658 C8orf76Q96K31 380 aa12.74□□□□□ -0.37
BEST3-209ENST00000548658 LXNQ9BS40 222 aa12.74□□□□□ -0.37
BEST3-209ENST00000548658 TMEM117Q9H0C3 514 aa12.74□□□□□ -0.37
BEST3-209ENST00000548658 TTC12Q9H892 705 aaPredicted RBP12.74□□□□□ -0.37
BEST3-209ENST00000548658 UPF2Q9HAU5 1272 aaKnown RBP12.74□□□□□ -0.37
BEST3-209ENST00000548658 FAM50BQ9Y247 325 aa12.74□□□□□ -0.37
BEST3-209ENST00000548658 TMEM150BA6NC51 233 aa12.73□□□□□ -0.37
BEST3-209ENST00000548658 DTNBO60941 627 aa12.73□□□□□ -0.37
BEST3-209ENST00000548658 IBSPP21815 317 aaPredicted RBP12.73□□□□□ -0.37
BEST3-209ENST00000548658 KCNA5P22460 613 aa12.73□□□□□ -0.37
BEST3-209ENST00000548658 SPIRE1Q08AE8 756 aa12.73□□□□□ -0.37
BEST3-209ENST00000548658 ORC2Q13416 577 aaPredicted RBP12.73□□□□□ -0.37
BEST3-209ENST00000548658 TCEAL5Q5H9L2 206 aa12.73□□□□□ -0.37
BEST3-209ENST00000548658 FAM102BQ5T8I3 360 aa12.73□□□□□ -0.37
BEST3-209ENST00000548658 CCDC83Q8IWF9 413 aa12.73□□□□□ -0.37
BEST3-209ENST00000548658 TPH2Q8IWU9 490 aa12.73□□□□□ -0.37
BEST3-209ENST00000548658 KLHL23Q8NBE8 558 aa12.73□□□□□ -0.37
BEST3-209ENST00000548658 PSPC1Q8WXF1 523 aaKnown RBP12.73□□□□□ -0.37
BEST3-209ENST00000548658 HSD17B14Q9BPX1 270 aa12.73□□□□□ -0.37
BEST3-209ENST00000548658 SH2D3AQ9BRG2 576 aa12.73□□□□□ -0.37
BEST3-209ENST00000548658 TRAIPQ9BWF2 469 aa12.73□□□□□ -0.37
BEST3-209ENST00000548658 FOXP1Q9H334 677 aaPredicted RBP12.73□□□□□ -0.37
BEST3-209ENST00000548658 DHX33Q9H6R0 707 aaKnown RBP12.73□□□□□ -0.37
BEST3-209ENST00000548658 ALG13Q9NP73 1137 aaKnown RBP12.73□□□□□ -0.37
BEST3-209ENST00000548658 REV3LO60673 3130 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 A0A087WZ62 844 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 CARNS1A5YM72 827 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 FAM205CA6NFA0 338 aa12.72□□□□□ -0.37
BEST3-209ENST00000548658 ST18O60284 1047 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms