RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 SCLT1Q96NL6 688 aa9.73□□□□□ -0.85
SP1-203ENST00000548560 NIFKQ9BYG3 293 aaKnown RBP9.73□□□□□ -0.85
SP1-203ENST00000548560 ZSCAN16Q9H4T2 348 aaPredicted RBP9.73□□□□□ -0.85
SP1-203ENST00000548560 SUGCTQ9HAC7 445 aa9.73□□□□□ -0.85
SP1-203ENST00000548560 TUFT1Q9NNX1 390 aa9.73□□□□□ -0.85
SP1-203ENST00000548560 RGL1Q9NZL6 768 aa9.73□□□□□ -0.85
SP1-203ENST00000548560 LRWD1Q9UFC0 647 aa9.73□□□□□ -0.85
SP1-203ENST00000548560 GINS2Q9Y248 185 aa9.73□□□□□ -0.85
SP1-203ENST00000548560 SLC4A7Q9Y6M7 1214 aa9.73□□□□□ -0.85
SP1-203ENST00000548560 CDH23Q9H251 3354 aa9.72□□□□□ -0.85
SP1-203ENST00000548560 ABHD14A-ACY1A0A1B0GW23 586 aa9.72□□□□□ -0.85
SP1-203ENST00000548560 TMEM150BA6NC51 233 aa9.72□□□□□ -0.85
SP1-203ENST00000548560 TRAK2O60296 914 aa9.72□□□□□ -0.85
SP1-203ENST00000548560 GHRP10912 638 aa9.72□□□□□ -0.85
SP1-203ENST00000548560 ATP2C1P98194 919 aaPredicted RBP9.72□□□□□ -0.85
SP1-203ENST00000548560 MGAT3Q09327 533 aa9.72□□□□□ -0.85
SP1-203ENST00000548560 IKBKEQ14164 716 aa9.72□□□□□ -0.85
SP1-203ENST00000548560 XKR9Q5GH70 373 aa9.72□□□□□ -0.85
SP1-203ENST00000548560 FAM26DQ5JW98 314 aa9.72□□□□□ -0.85
SP1-203ENST00000548560 ODR4Q5SWX8 454 aa9.72□□□□□ -0.85
SP1-203ENST00000548560 KRT79Q5XKE5 535 aa9.72□□□□□ -0.85
SP1-203ENST00000548560 TRAF7Q6Q0C0 670 aa9.72□□□□□ -0.85
SP1-203ENST00000548560 TSHZ1Q6ZSZ6 1077 aa9.72□□□□□ -0.85
SP1-203ENST00000548560 ANO5Q75V66 913 aa9.72□□□□□ -0.85
SP1-203ENST00000548560 C16orf59Q7L2K0 433 aa9.72□□□□□ -0.85
SP1-203ENST00000548560 ZNF710Q8N1W2 664 aa9.72□□□□□ -0.85
SP1-203ENST00000548560 LRRC71Q8N4P6 559 aa9.72□□□□□ -0.85
SP1-203ENST00000548560 USP38Q8NB14 1042 aa9.72□□□□□ -0.85
SP1-203ENST00000548560 SLC9A7Q96T83 725 aa9.72□□□□□ -0.85
SP1-203ENST00000548560 IFIH1Q9BYX4 1025 aaKnown RBP9.72□□□□□ -0.85
SP1-203ENST00000548560 CELF4Q9BZC1 486 aaKnown RBP9.72□□□□□ -0.85
SP1-203ENST00000548560 CYP26B1Q9NR63 512 aa9.72□□□□□ -0.85
SP1-203ENST00000548560 MTMR6Q9Y217 621 aa9.72□□□□□ -0.85
SP1-203ENST00000548560 NLRC5Q86WI3 1866 aa9.72□□□□□ -0.85
SP1-203ENST00000548560 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.71□□□□□ -0.86
SP1-203ENST00000548560 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.71□□□□□ -0.86
SP1-203ENST00000548560 GAS2O43903 313 aaKnown RBP9.71□□□□□ -0.86
SP1-203ENST00000548560 SLITRK3O94933 977 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 LYPLA2O95372 231 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 CHRNA1P02708 482 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 VTNP04004 478 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 ATP2A2P16615 1042 aaKnown RBP9.71□□□□□ -0.86
SP1-203ENST00000548560 MUTP22033 750 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 RPA1P27694 616 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 CCT6AP40227 531 aaKnown RBP9.71□□□□□ -0.86
SP1-203ENST00000548560 RFC5P40937 340 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 SMAD3P84022 425 aaKnown RBP9.71□□□□□ -0.86
SP1-203ENST00000548560 CDC42EP1Q00587 391 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 RESTQ13127 1097 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 PAK2Q13177 524 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 PDIA5Q14554 519 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 MBTPS1Q14703 1052 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 TARBP2Q15633 366 aaKnown RBP9.71□□□□□ -0.86
SP1-203ENST00000548560 PLEKHG4Q58EX7 1191 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 FBXO47Q5MNV8 452 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 RASIP1Q5U651 963 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 ARL6IP4Q66PJ3 421 aaKnown RBP9.71□□□□□ -0.86
SP1-203ENST00000548560 KIAA0319LQ8IZA0 1049 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 C4orf32Q8N8J7 132 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 DBF4BQ8NFT6 615 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 SNX29Q8TEQ0 813 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 TCP11Q8WWU5 503 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 PPP1R16BQ96T49 567 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 MTRQ99707 1265 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 HSD17B14Q9BPX1 270 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 SH2D3AQ9BRG2 576 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 POLR3CQ9BUI4 534 aaPredicted RBP9.71□□□□□ -0.86
SP1-203ENST00000548560 ADAM33Q9BZ11 813 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 ANKEF1Q9NU02 776 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 CXXC1Q9P0U4 656 aaPredicted RBP9.71□□□□□ -0.86
SP1-203ENST00000548560 WRAP73Q9P2S5 460 aaPredicted RBP9.71□□□□□ -0.86
SP1-203ENST00000548560 SQORQ9Y6N5 450 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 TCHHQ07283 1943 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 KDM3AQ9Y4C1 1321 aa9.71□□□□□ -0.86
SP1-203ENST00000548560 VWA3AA6NCI4 1184 aa9.7□□□□□ -0.86
SP1-203ENST00000548560 MAFO75444 373 aaPredicted RBP9.7□□□□□ -0.86
SP1-203ENST00000548560 MED24O75448 989 aa9.7□□□□□ -0.86
SP1-203ENST00000548560 RPS6KA5O75582 802 aa9.7□□□□□ -0.86
SP1-203ENST00000548560 STBD1O95210 358 aa9.7□□□□□ -0.86
SP1-203ENST00000548560 AMHP03971 560 aa9.7□□□□□ -0.86
SP1-203ENST00000548560 NPEPPSP55786 919 aa9.7□□□□□ -0.86
SP1-203ENST00000548560 NLRP11P59045 1033 aaKnown RBP9.7□□□□□ -0.86
SP1-203ENST00000548560 WDR5P61964 334 aaKnown RBP9.7□□□□□ -0.86
SP1-203ENST00000548560 LPIN1Q14693 890 aa9.7□□□□□ -0.86
SP1-203ENST00000548560 GPNMBQ14956 572 aa9.7□□□□□ -0.86
SP1-203ENST00000548560 EMC2Q15006 297 aa9.7□□□□□ -0.86
SP1-203ENST00000548560 SF3A1Q15459 793 aaKnown RBP9.7□□□□□ -0.86
SP1-203ENST00000548560 RAB30Q15771 203 aa9.7□□□□□ -0.86
SP1-203ENST00000548560 KIZQ2M2Z5 673 aa9.7□□□□□ -0.86
SP1-203ENST00000548560 ARSIQ5FYB1 569 aa9.7□□□□□ -0.86
SP1-203ENST00000548560 CATSPER3Q86XQ3 398 aa9.7□□□□□ -0.86
SP1-203ENST00000548560 IGSF22Q8N9C0 903 aa9.7□□□□□ -0.86
SP1-203ENST00000548560 TTC13Q8NBP0 860 aa9.7□□□□□ -0.86
SP1-203ENST00000548560 RASSF8Q8NHQ8 419 aa9.7□□□□□ -0.86
SP1-203ENST00000548560 PIGOQ8TEQ8 1089 aa9.7□□□□□ -0.86
SP1-203ENST00000548560 PSPC1Q8WXF1 523 aaKnown RBP9.7□□□□□ -0.86
SP1-203ENST00000548560 CDK5RAP3Q96JB5 506 aa9.7□□□□□ -0.86
SP1-203ENST00000548560 NACC1Q96RE7 527 aa9.7□□□□□ -0.86
SP1-203ENST00000548560 OSMRQ99650 979 aa9.7□□□□□ -0.86
SP1-203ENST00000548560 FTHL17Q9BXU8 183 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms