RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 PRSS50Q9UI38 385 aa5.44□□□□□ -1.54
PTCH1-216ENST00000548379 PNMA8BQ9ULN7 279 aaPredicted RBP5.44□□□□□ -1.54
PTCH1-216ENST00000548379 GIT1Q9Y2X7 761 aa5.44□□□□□ -1.54
PTCH1-216ENST00000548379 GPR45Q9Y5Y3 372 aa5.44□□□□□ -1.54
PTCH1-216ENST00000548379 MRFAP1Q9Y605 127 aa5.44□□□□□ -1.54
PTCH1-216ENST00000548379 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.43□□□□□ -1.54
PTCH1-216ENST00000548379 LPLP06858 475 aa5.43□□□□□ -1.54
PTCH1-216ENST00000548379 MTHFD2P13995 350 aa5.43□□□□□ -1.54
PTCH1-216ENST00000548379 CCND1P24385 295 aa5.43□□□□□ -1.54
PTCH1-216ENST00000548379 GPR15P49685 360 aa5.43□□□□□ -1.54
PTCH1-216ENST00000548379 CAP1Q01518 475 aa5.43□□□□□ -1.54
PTCH1-216ENST00000548379 MESP2Q0VG99 397 aa5.43□□□□□ -1.54
PTCH1-216ENST00000548379 NFATC3Q12968 1075 aa5.43□□□□□ -1.54
PTCH1-216ENST00000548379 CXorf57Q6NSI4 855 aaKnown RBP5.43□□□□□ -1.54
PTCH1-216ENST00000548379 BMP8AQ7Z5Y6 402 aa5.43□□□□□ -1.54
PTCH1-216ENST00000548379 PNMA8AQ86V59 439 aaPredicted RBP5.43□□□□□ -1.54
PTCH1-216ENST00000548379 BCL6BQ8N143 479 aaPredicted RBP5.43□□□□□ -1.54
PTCH1-216ENST00000548379 TTLL6Q8N841 843 aa5.43□□□□□ -1.54
PTCH1-216ENST00000548379 PPP1R14CQ8TAE6 165 aa5.43□□□□□ -1.54
PTCH1-216ENST00000548379 TSPEARQ8WU66 669 aa5.43□□□□□ -1.54
PTCH1-216ENST00000548379 CLIC6Q96NY7 704 aa5.43□□□□□ -1.54
PTCH1-216ENST00000548379 TACO1Q9BSH4 297 aaKnown RBP5.43□□□□□ -1.54
PTCH1-216ENST00000548379 MTG2Q9H4K7 406 aa5.43□□□□□ -1.54
PTCH1-216ENST00000548379 KCMF1Q9P0J7 381 aa5.43□□□□□ -1.54
PTCH1-216ENST00000548379 EDARQ9UNE0 448 aa5.43□□□□□ -1.54
PTCH1-216ENST00000548379 ANKRD6Q9Y2G4 727 aa5.43□□□□□ -1.54
PTCH1-216ENST00000548379 ST20-MTHFSA0A0A6YYL1 179 aa5.42□□□□□ -1.54
PTCH1-216ENST00000548379 PRPF3O43395 683 aaKnown RBP5.42□□□□□ -1.54
PTCH1-216ENST00000548379 CUTAO60888 179 aa5.42□□□□□ -1.54
PTCH1-216ENST00000548379 APOL3O95236 402 aa5.42□□□□□ -1.54
PTCH1-216ENST00000548379 KNG1P01042 644 aa5.42□□□□□ -1.54
PTCH1-216ENST00000548379 PLA2G1BP04054 148 aaKnown RBP5.42□□□□□ -1.54
PTCH1-216ENST00000548379 MED14OSP0DP75 135 aa5.42□□□□□ -1.54
PTCH1-216ENST00000548379 GLRBP48167 497 aa5.42□□□□□ -1.54
PTCH1-216ENST00000548379 LGALS4P56470 323 aa5.42□□□□□ -1.54
PTCH1-216ENST00000548379 ANO4Q32M45 955 aa5.42□□□□□ -1.54
PTCH1-216ENST00000548379 CCDC178Q5BJE1 867 aa5.42□□□□□ -1.54
PTCH1-216ENST00000548379 PHF19Q5T6S3 580 aa5.42□□□□□ -1.54
PTCH1-216ENST00000548379 TMEM200BQ69YZ2 307 aa5.42□□□□□ -1.54
PTCH1-216ENST00000548379 DPP8Q6V1X1 898 aaPredicted RBP5.42□□□□□ -1.54
PTCH1-216ENST00000548379 STK32CQ86UX6 486 aa5.42□□□□□ -1.54
PTCH1-216ENST00000548379 MYO1HQ8N1T3 1032 aa5.42□□□□□ -1.54
PTCH1-216ENST00000548379 STPG3Q8N7X2 389 aa5.42□□□□□ -1.54
PTCH1-216ENST00000548379 MAGEB6Q8N7X4 407 aa5.42□□□□□ -1.54
PTCH1-216ENST00000548379 AUTS2Q8WXX7 1259 aa5.42□□□□□ -1.54
PTCH1-216ENST00000548379 RPGRQ92834 1020 aaKnown RBP5.42□□□□□ -1.54
PTCH1-216ENST00000548379 QRSL1Q9H0R6 528 aaKnown RBP5.42□□□□□ -1.54
PTCH1-216ENST00000548379 EPB41L4AQ9HCS5 686 aaPredicted RBP5.42□□□□□ -1.54
PTCH1-216ENST00000548379 FTSJ1Q9UET6 329 aa5.42□□□□□ -1.54
PTCH1-216ENST00000548379 TUBD1Q9UJT1 453 aa5.42□□□□□ -1.54
PTCH1-216ENST00000548379 CDY2AQ9Y6F7 541 aa5.42□□□□□ -1.54
PTCH1-216ENST00000548379 ATAD2BQ9ULI0 1458 aa5.42□□□□□ -1.54
PTCH1-216ENST00000548379 A0A0A6YYK5 440 aaPredicted RBP5.41□□□□□ -1.54
PTCH1-216ENST00000548379 XPOTO43592 962 aaKnown RBP5.41□□□□□ -1.54
PTCH1-216ENST00000548379 SEC24DO94855 1032 aaPredicted RBP5.41□□□□□ -1.54
PTCH1-216ENST00000548379 KRT1P04264 644 aa5.41□□□□□ -1.54
PTCH1-216ENST00000548379 PF4V1P10720 104 aa5.41□□□□□ -1.54
PTCH1-216ENST00000548379 VCAM1P19320 739 aa5.41□□□□□ -1.54
PTCH1-216ENST00000548379 C5AR1P21730 350 aa5.41□□□□□ -1.54
PTCH1-216ENST00000548379 GLDCP23378 1020 aa5.41□□□□□ -1.54
PTCH1-216ENST00000548379 LIMS1P48059 325 aa5.41□□□□□ -1.54
PTCH1-216ENST00000548379 SLC5A3P53794 718 aa5.41□□□□□ -1.54
PTCH1-216ENST00000548379 ADKP55263 362 aaKnown RBP5.41□□□□□ -1.54
PTCH1-216ENST00000548379 CD83Q01151 205 aa5.41□□□□□ -1.54
PTCH1-216ENST00000548379 DLX2Q07687 328 aaPredicted RBP5.41□□□□□ -1.54
PTCH1-216ENST00000548379 EFCAB2Q5VUJ9 269 aa5.41□□□□□ -1.54
PTCH1-216ENST00000548379 TMEM132EQ6IEE7 984 aa5.41□□□□□ -1.54
PTCH1-216ENST00000548379 CDYL2Q8N8U2 506 aa5.41□□□□□ -1.54
PTCH1-216ENST00000548379 OR5AN1Q8NGI8 311 aa5.41□□□□□ -1.54
PTCH1-216ENST00000548379 OR14C36Q8NHC7 312 aa5.41□□□□□ -1.54
PTCH1-216ENST00000548379 HSPBAP1Q96EW2 488 aa5.41□□□□□ -1.54
PTCH1-216ENST00000548379 SIGLEC10Q96LC7 697 aa5.41□□□□□ -1.54
PTCH1-216ENST00000548379 ZSWIM3Q96MP5 696 aa5.41□□□□□ -1.54
PTCH1-216ENST00000548379 SOX7Q9BT81 388 aa5.41□□□□□ -1.54
PTCH1-216ENST00000548379 KRTAP9-2Q9BYQ4 174 aa5.41□□□□□ -1.54
PTCH1-216ENST00000548379 IFT122Q9HBG6 1241 aa5.41□□□□□ -1.54
PTCH1-216ENST00000548379 SPATA6Q9NWH7 488 aaPredicted RBP5.41□□□□□ -1.54
PTCH1-216ENST00000548379 DPP7Q9UHL4 492 aa5.41□□□□□ -1.54
PTCH1-216ENST00000548379 EVLQ9UI08 416 aaPredicted RBP5.41□□□□□ -1.54
PTCH1-216ENST00000548379 SCOCQ9UIL1 159 aa5.41□□□□□ -1.54
PTCH1-216ENST00000548379 INVSQ9Y283 1065 aa5.41□□□□□ -1.54
PTCH1-216ENST00000548379 PCDHB6Q9Y5E3 794 aa5.41□□□□□ -1.54
PTCH1-216ENST00000548379 ETV2O00321 342 aaPredicted RBP5.4□□□□□ -1.54
PTCH1-216ENST00000548379 MAFGO15525 162 aa5.4□□□□□ -1.54
PTCH1-216ENST00000548379 PCDH8O95206 1070 aa5.4□□□□□ -1.54
PTCH1-216ENST00000548379 OSMP13725 252 aa5.4□□□□□ -1.54
PTCH1-216ENST00000548379 ZNF28P17035 718 aa5.4□□□□□ -1.54
PTCH1-216ENST00000548379 LPOP22079 712 aaPredicted RBP5.4□□□□□ -1.54
PTCH1-216ENST00000548379 MLLT6P55198 1093 aaPredicted RBP5.4□□□□□ -1.54
PTCH1-216ENST00000548379 ANTXR2P58335 489 aa5.4□□□□□ -1.54
PTCH1-216ENST00000548379 SPIDRQ14159 915 aa5.4□□□□□ -1.54
PTCH1-216ENST00000548379 MLC1Q15049 377 aa5.4□□□□□ -1.54
PTCH1-216ENST00000548379 CLUL1Q15846 466 aa5.4□□□□□ -1.54
PTCH1-216ENST00000548379 MBNL2Q5VZF2 373 aaKnown RBP5.4□□□□□ -1.54
PTCH1-216ENST00000548379 GRAMD4Q6IC98 578 aa5.4□□□□□ -1.54
PTCH1-216ENST00000548379 NOL8Q76FK4 1167 aaKnown RBP5.4□□□□□ -1.54
PTCH1-216ENST00000548379 FAM129CQ86XR2 697 aa5.4□□□□□ -1.54
PTCH1-216ENST00000548379 TTC8Q8TAM2 541 aa5.4□□□□□ -1.54
PTCH1-216ENST00000548379 FNIP1Q8TF40 1166 aa5.4□□□□□ -1.54
PTCH1-216ENST00000548379 GAB3Q8WWW8 586 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms