RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 MTMR6Q9Y217 621 aa20.9■□□□□ 0.94
PRPF40B-206ENST00000547764 LCHNA4D1U4 455 aa20.89■□□□□ 0.93
PRPF40B-206ENST00000547764 UPP2O95045 317 aa20.89■□□□□ 0.93
PRPF40B-206ENST00000547764 EIF4BP23588 611 aaKnown RBP20.89■□□□□ 0.93
PRPF40B-206ENST00000547764 ODR4Q5SWX8 454 aa20.89■□□□□ 0.93
PRPF40B-206ENST00000547764 POTEGQ6S5H5 508 aa20.89■□□□□ 0.93
PRPF40B-206ENST00000547764 RHPN2Q8IUC4 686 aa20.89■□□□□ 0.93
PRPF40B-206ENST00000547764 KSR1Q8IVT5 923 aa20.89■□□□□ 0.93
PRPF40B-206ENST00000547764 CCDC43Q96MW1 224 aaKnown RBP20.89■□□□□ 0.93
PRPF40B-206ENST00000547764 NACC1Q96RE7 527 aa20.89■□□□□ 0.93
PRPF40B-206ENST00000547764 TSPYL2Q9H2G4 693 aaPredicted RBP20.89■□□□□ 0.93
PRPF40B-206ENST00000547764 A0A087WZ62 844 aa20.88■□□□□ 0.93
PRPF40B-206ENST00000547764 STX6O43752 255 aa20.88■□□□□ 0.93
PRPF40B-206ENST00000547764 GAS2O43903 313 aaKnown RBP20.88■□□□□ 0.93
PRPF40B-206ENST00000547764 ARHGEF15O94989 841 aa20.88■□□□□ 0.93
PRPF40B-206ENST00000547764 HSP90AA1P07900 732 aaKnown RBP20.88■□□□□ 0.93
PRPF40B-206ENST00000547764 DARSP14868 501 aaKnown RBP20.88■□□□□ 0.93
PRPF40B-206ENST00000547764 CCT6AP40227 531 aaKnown RBP20.88■□□□□ 0.93
PRPF40B-206ENST00000547764 RESTQ13127 1097 aa20.88■□□□□ 0.93
PRPF40B-206ENST00000547764 ECM1Q16610 540 aa20.88■□□□□ 0.93
PRPF40B-206ENST00000547764 CDX2Q99626 313 aaPredicted RBP20.88■□□□□ 0.93
PRPF40B-206ENST00000547764 MTRQ99707 1265 aa20.88■□□□□ 0.93
PRPF40B-206ENST00000547764 FDXACB1Q9BRP7 624 aaPredicted RBP20.88■□□□□ 0.93
PRPF40B-206ENST00000547764 XPNPEP1Q9NQW7 623 aa20.88■□□□□ 0.93
PRPF40B-206ENST00000547764 INSL6Q9Y581 213 aa20.88■□□□□ 0.93
PRPF40B-206ENST00000547764 CDH23Q9H251 3354 aa20.88■□□□□ 0.93
PRPF40B-206ENST00000547764 CHD9Q3L8U1 2897 aa20.88■□□□□ 0.93
PRPF40B-206ENST00000547764 ARID2Q68CP9 1835 aa20.88■□□□□ 0.93
PRPF40B-206ENST00000547764 PP2D1A8MPX8 630 aa20.87■□□□□ 0.93
PRPF40B-206ENST00000547764 MGEA5O60502 916 aa20.87■□□□□ 0.93
PRPF40B-206ENST00000547764 DGAT1O75907 488 aa20.87■□□□□ 0.93
PRPF40B-206ENST00000547764 MUTP22033 750 aa20.87■□□□□ 0.93
PRPF40B-206ENST00000547764 HTRA4P83105 476 aaPredicted RBP20.87■□□□□ 0.93
PRPF40B-206ENST00000547764 ARL6IP4Q66PJ3 421 aaKnown RBP20.87■□□□□ 0.93
PRPF40B-206ENST00000547764 FAM43BQ6ZT52 329 aaPredicted RBP20.87■□□□□ 0.93
PRPF40B-206ENST00000547764 ZNF410Q86VK4 478 aa20.87■□□□□ 0.93
PRPF40B-206ENST00000547764 SNX29Q8TEQ0 813 aa20.87■□□□□ 0.93
PRPF40B-206ENST00000547764 TCP11Q8WWU5 503 aa20.87■□□□□ 0.93
PRPF40B-206ENST00000547764 PRPF31Q8WWY3 499 aaKnown RBP20.87■□□□□ 0.93
PRPF40B-206ENST00000547764 PSPC1Q8WXF1 523 aaKnown RBP20.87■□□□□ 0.93
PRPF40B-206ENST00000547764 GCOM2Q9BZD3 368 aaPredicted RBP20.87■□□□□ 0.93
PRPF40B-206ENST00000547764 DBR1Q9UK59 544 aaKnown RBP20.87■□□□□ 0.93
PRPF40B-206ENST00000547764 COL4A3BPQ9Y5P4 624 aa20.87■□□□□ 0.93
PRPF40B-206ENST00000547764 STK24Q9Y6E0 443 aa20.87■□□□□ 0.93
PRPF40B-206ENST00000547764 VWA3AA6NCI4 1184 aa20.86■□□□□ 0.93
PRPF40B-206ENST00000547764 CSDE1O75534 798 aaKnown RBP20.86■□□□□ 0.93
PRPF40B-206ENST00000547764 CDC25AP30304 524 aa20.86■□□□□ 0.93
PRPF40B-206ENST00000547764 TAP1Q03518 808 aa20.86■□□□□ 0.93
PRPF40B-206ENST00000547764 SF3A1Q15459 793 aaKnown RBP20.86■□□□□ 0.93
PRPF40B-206ENST00000547764 KRT79Q5XKE5 535 aa20.86■□□□□ 0.93
PRPF40B-206ENST00000547764 FAM173BQ6P4H8 233 aa20.86■□□□□ 0.93
PRPF40B-206ENST00000547764 NLRP4Q96MN2 994 aa20.86■□□□□ 0.93
PRPF40B-206ENST00000547764 ADAM2Q99965 735 aa20.86■□□□□ 0.93
PRPF40B-206ENST00000547764 ATP6V0A4Q9HBG4 840 aa20.86■□□□□ 0.93
PRPF40B-206ENST00000547764 KIAA1024Q9UPX6 916 aa20.86■□□□□ 0.93
PRPF40B-206ENST00000547764 TTC3P53804 2025 aa20.86■□□□□ 0.93
PRPF40B-206ENST00000547764 MYO9BQ13459 2157 aa20.86■□□□□ 0.93
PRPF40B-206ENST00000547764 BMP15O95972 392 aa20.85■□□□□ 0.93
PRPF40B-206ENST00000547764 FGFR4P22455 802 aa20.85■□□□□ 0.93
PRPF40B-206ENST00000547764 LAMTOR4Q0VGL1 99 aa20.85■□□□□ 0.93
PRPF40B-206ENST00000547764 CRIPAKQ8N1N5 446 aa20.85■□□□□ 0.93
PRPF40B-206ENST00000547764 SPRYD3Q8NCJ5 442 aa20.85■□□□□ 0.93
PRPF40B-206ENST00000547764 MYLIPQ8WY64 445 aa20.85■□□□□ 0.93
PRPF40B-206ENST00000547764 YME1L1Q96TA2 773 aa20.85■□□□□ 0.93
PRPF40B-206ENST00000547764 MMTAG2Q9BU76 263 aaKnown RBP20.85■□□□□ 0.93
PRPF40B-206ENST00000547764 IFT122Q9HBG6 1241 aa20.85■□□□□ 0.93
PRPF40B-206ENST00000547764 RGS18Q9NS28 235 aa20.85■□□□□ 0.93
PRPF40B-206ENST00000547764 DENND3A2RUS2 1198 aa20.84■□□□□ 0.93
PRPF40B-206ENST00000547764 ASAP2O43150 1006 aa20.84■□□□□ 0.93
PRPF40B-206ENST00000547764 USO1O60763 962 aaKnown RBP20.84■□□□□ 0.93
PRPF40B-206ENST00000547764 SRGAP2CP0DJJ0 459 aa20.84■□□□□ 0.93
PRPF40B-206ENST00000547764 DSC3Q14574 896 aa20.84■□□□□ 0.93
PRPF40B-206ENST00000547764 SPRED2Q7Z698 418 aa20.84■□□□□ 0.93
PRPF40B-206ENST00000547764 SP7Q8TDD2 431 aaPredicted RBP20.84■□□□□ 0.93
PRPF40B-206ENST00000547764 INO80BQ9C086 356 aaPredicted RBP20.84■□□□□ 0.93
PRPF40B-206ENST00000547764 PRDM12Q9H4Q4 367 aa20.84■□□□□ 0.93
PRPF40B-206ENST00000547764 CERS4Q9HA82 394 aa20.84■□□□□ 0.93
PRPF40B-206ENST00000547764 DDX19AQ9NUU7 478 aaKnown RBP20.84■□□□□ 0.93
PRPF40B-206ENST00000547764 STXBP5LQ9Y2K9 1186 aa20.84■□□□□ 0.93
PRPF40B-206ENST00000547764 CLIC4Q9Y696 253 aa20.84■□□□□ 0.93
PRPF40B-206ENST00000547764 CHD7Q9P2D1 2997 aa20.83■□□□□ 0.93
PRPF40B-206ENST00000547764 LINC01553A4QN01 128 aa20.83■□□□□ 0.93
PRPF40B-206ENST00000547764 ARL2P36404 184 aa20.83■□□□□ 0.93
PRPF40B-206ENST00000547764 MXD4Q14582 209 aaPredicted RBP20.83■□□□□ 0.93
PRPF40B-206ENST00000547764 PADI6Q6TGC4 694 aa20.83■□□□□ 0.93
PRPF40B-206ENST00000547764 SLC24A5Q71RS6 500 aa20.83■□□□□ 0.93
PRPF40B-206ENST00000547764 NPAS4Q8IUM7 802 aa20.83■□□□□ 0.93
PRPF40B-206ENST00000547764 ZSCAN16Q9H4T2 348 aaPredicted RBP20.83■□□□□ 0.93
PRPF40B-206ENST00000547764 C1orf112Q9NSG2 853 aa20.83■□□□□ 0.93
PRPF40B-206ENST00000547764 ARHGEF35A5YM69 484 aa20.82■□□□□ 0.92
PRPF40B-206ENST00000547764 C9IYK1 514 aa20.82■□□□□ 0.92
PRPF40B-206ENST00000547764 ZSCAN20P17040 1043 aaPredicted RBP20.82■□□□□ 0.92
PRPF40B-206ENST00000547764 IBSPP21815 317 aaPredicted RBP20.82■□□□□ 0.92
PRPF40B-206ENST00000547764 SFPQP23246 707 aaKnown RBP eCLIP20.82■□□□□ 0.92
PRPF40B-206ENST00000547764 SARSP49591 514 aaKnown RBP20.82■□□□□ 0.92
PRPF40B-206ENST00000547764 MAEAQ7L5Y9 396 aa20.82■□□□□ 0.92
PRPF40B-206ENST00000547764 RNF149Q8NC42 400 aa20.82■□□□□ 0.92
PRPF40B-206ENST00000547764 ASAP3Q8TDY4 903 aa20.82■□□□□ 0.92
PRPF40B-206ENST00000547764 BHMT2Q9H2M3 363 aa20.82■□□□□ 0.92
PRPF40B-206ENST00000547764 GPRC5CQ9NQ84 441 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms