RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 ARHGAP18Q8N392 663 aa12.86□□□□□ -0.35
RBFOX1-208ENST00000547372 RIBC1Q8N443 379 aaPredicted RBP12.86□□□□□ -0.35
RBFOX1-208ENST00000547372 FAM163AQ96GL9 167 aaPredicted RBP12.86□□□□□ -0.35
RBFOX1-208ENST00000547372 AGBL1Q96MI9 1066 aa12.86□□□□□ -0.35
RBFOX1-208ENST00000547372 MYBP10242 640 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 GNAT2P19087 354 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 CCNE1P24864 410 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 CCNG1P51959 295 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 IL17AQ16552 155 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 RFWD3Q6PCD5 774 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 BARGINQ6ZT62 677 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 ASRGL1Q7L266 308 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 MPP4Q96JB8 637 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 MMTAG2Q9BU76 263 aaKnown RBP12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 PHF20Q9BVI0 1012 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 RNF26Q9BY78 433 aaPredicted RBP12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 PABPC3Q9H361 631 aaKnown RBP12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 CTNNAL1Q9UBT7 734 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 MYH7BA7E2Y1 1941 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 MAP3K7O43318 606 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 TECP42680 631 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 PSMC4P43686 418 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 DR1Q01658 176 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 CABP7Q86V35 215 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 EIF1ADQ8N9N8 165 aaKnown RBP12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 GIMAP8Q8ND71 665 aaPredicted RBP12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 IQCDQ96DY2 449 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 ZNF333Q96JL9 665 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 SMC6Q96SB8 1091 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 NAP1L3Q99457 506 aaPredicted RBP12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 PCDH11XQ9BZA7 1347 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 ECM29Q5VYK3 1845 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 CCNT1O60563 726 aaKnown RBP12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 CAPN15O75808 1086 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 RASA1P20936 1047 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 SEPT7Q16181 437 aaKnown RBP12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 DCAF17Q5H9S7 520 aaPredicted RBP12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 MCUR1Q96AQ8 359 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 PHF12Q96QT6 1004 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 LSM14BQ9BX40 385 aaKnown RBP12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 NT5C3AQ9H0P0 336 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 ARHGEF38Q9NXL2 777 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 ZNF510Q9Y2H8 683 aa12.85□□□□□ -0.35
RBFOX1-208ENST00000547372 A0A1W2PRG0 241 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 BRAFP15056 766 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 ABCB4P21439 1286 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 COG7P83436 770 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 EXOC3L1Q86VI1 746 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 VPS52Q8N1B4 723 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 FBXO41Q8TF61 875 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 WDR60Q8WVS4 1066 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 DCLRE1BQ9H816 532 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 DISC1Q9NRI5 854 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 ANKRD62A6NC57 917 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 CIAO1O76071 339 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 GALK1P51570 392 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 RTP1P59025 263 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 MGAT5Q09328 741 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 DNAJC3Q13217 504 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 TMEM110Q86TL2 294 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 SRRM1Q8IYB3 904 aaKnown RBP12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 PTPRN2Q92932 1015 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 STRBPQ96SI9 672 aaKnown RBP12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 NKIRAS1Q9NYS0 192 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 ABCC12Q96J65 1359 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 MAGEB6P1A0A0J9YX57 407 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 TXNDC9O14530 226 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 ABLIM1O14639 778 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 IRS4O14654 1257 aaPredicted RBP12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 PLCG2P16885 1265 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 CALML3P27482 149 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 NAPAP54920 295 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 PABPC1LQ4VXU2 614 aaKnown RBP12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 SV2BQ7L1I2 683 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 CYP4X1Q8N118 509 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 SPATA5Q8NB90 893 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 SMC1BQ8NDV3 1235 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 ANKRD27Q96NW4 1050 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 IWS1Q96ST2 819 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 TTC1Q99614 292 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 SIKE1Q9BRV8 207 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 SPATA16Q9BXB7 569 aa12.84□□□□□ -0.35
RBFOX1-208ENST00000547372 RHOBTB3O94955 611 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 AGTP01019 485 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 NEK3P51956 506 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 PKN1Q16512 942 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 SLC44A4Q53GD3 710 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 SH2D4BQ5SQS7 431 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 FAM83BQ5T0W9 1011 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 CNNM4Q6P4Q7 775 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 PDXDC1Q6P996 788 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 DSTYKQ6XUX3 929 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 ZSCAN29Q8IWY8 852 aaPredicted RBP12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 SCFD2Q8WU76 684 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 CENPKQ9BS16 269 aa12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 STMN4Q9H169 189 aaPredicted RBP12.83□□□□□ -0.36
RBFOX1-208ENST00000547372 GREM2Q9H772 168 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms