RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 TXLNAP40222 546 aa13.49□□□□□ -0.25
HDAC7-226ENST00000547259 ACTR2P61160 394 aa13.49□□□□□ -0.25
HDAC7-226ENST00000547259 HIC1Q14526 733 aa13.49□□□□□ -0.25
HDAC7-226ENST00000547259 PDIA5Q14554 519 aa13.49□□□□□ -0.25
HDAC7-226ENST00000547259 TCTN1Q2MV58 587 aa13.49□□□□□ -0.25
HDAC7-226ENST00000547259 HAUS3Q68CZ6 603 aa13.49□□□□□ -0.25
HDAC7-226ENST00000547259 MIS18BP1Q6P0N0 1132 aa13.49□□□□□ -0.25
HDAC7-226ENST00000547259 FIBCD1Q8N539 461 aa13.49□□□□□ -0.25
HDAC7-226ENST00000547259 RDM1Q8NG50 284 aa13.49□□□□□ -0.25
HDAC7-226ENST00000547259 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.49□□□□□ -0.25
HDAC7-226ENST00000547259 NEK9Q8TD19 979 aa13.49□□□□□ -0.25
HDAC7-226ENST00000547259 PABPC5Q96DU9 382 aaKnown RBP13.49□□□□□ -0.25
HDAC7-226ENST00000547259 AK8Q96MA6 479 aa13.49□□□□□ -0.25
HDAC7-226ENST00000547259 NSUN3Q9H649 340 aaKnown RBP13.49□□□□□ -0.25
HDAC7-226ENST00000547259 DISC1Q9NRI5 854 aa13.49□□□□□ -0.25
HDAC7-226ENST00000547259 SETD4Q9NVD3 440 aa13.49□□□□□ -0.25
HDAC7-226ENST00000547259 STK24Q9Y6E0 443 aa13.49□□□□□ -0.25
HDAC7-226ENST00000547259 TTC3P53804 2025 aa13.49□□□□□ -0.25
HDAC7-226ENST00000547259 EML1O00423 815 aa13.48□□□□□ -0.25
HDAC7-226ENST00000547259 BACH1O14867 736 aa13.48□□□□□ -0.25
HDAC7-226ENST00000547259 PSAPP07602 524 aa13.48□□□□□ -0.25
HDAC7-226ENST00000547259 HOXD11P31277 338 aaPredicted RBP13.48□□□□□ -0.25
HDAC7-226ENST00000547259 UBA7P41226 1012 aa13.48□□□□□ -0.25
HDAC7-226ENST00000547259 EPHA7Q15375 998 aa13.48□□□□□ -0.25
HDAC7-226ENST00000547259 SPECC1Q5M775 1068 aa13.48□□□□□ -0.25
HDAC7-226ENST00000547259 AXDND1Q5T1B0 1012 aaPredicted RBP13.48□□□□□ -0.25
HDAC7-226ENST00000547259 KRT79Q5XKE5 535 aa13.48□□□□□ -0.25
HDAC7-226ENST00000547259 ADALQ6DHV7 355 aa13.48□□□□□ -0.25
HDAC7-226ENST00000547259 B3GNT9Q6UX72 402 aa13.48□□□□□ -0.25
HDAC7-226ENST00000547259 ZNF579Q8NAF0 562 aaKnown RBP13.48□□□□□ -0.25
HDAC7-226ENST00000547259 RASSF8Q8NHQ8 419 aa13.48□□□□□ -0.25
HDAC7-226ENST00000547259 SNX29Q8TEQ0 813 aa13.48□□□□□ -0.25
HDAC7-226ENST00000547259 PPP2R3CQ969Q6 453 aa13.48□□□□□ -0.25
HDAC7-226ENST00000547259 C11orf84Q9BUA3 381 aaPredicted RBP13.48□□□□□ -0.25
HDAC7-226ENST00000547259 ERAP1Q9NZ08 941 aa13.48□□□□□ -0.25
HDAC7-226ENST00000547259 TELO2Q9Y4R8 837 aa13.48□□□□□ -0.25
HDAC7-226ENST00000547259 PCDHA10Q9Y5I2 948 aa13.48□□□□□ -0.25
HDAC7-226ENST00000547259 GSTTP1A0A1W2PQM5 241 aa13.47□□□□□ -0.25
HDAC7-226ENST00000547259 C5orf67F2Z3F1 127 aa13.47□□□□□ -0.25
HDAC7-226ENST00000547259 PRPF40AO75400 957 aaKnown RBP13.47□□□□□ -0.25
HDAC7-226ENST00000547259 CTSHP09668 335 aa13.47□□□□□ -0.25
HDAC7-226ENST00000547259 CDC25AP30304 524 aa13.47□□□□□ -0.25
HDAC7-226ENST00000547259 TCF7P36402 384 aaPredicted RBP13.47□□□□□ -0.25
HDAC7-226ENST00000547259 CCT6AP40227 531 aaKnown RBP13.47□□□□□ -0.25
HDAC7-226ENST00000547259 ADAM17P78536 824 aa13.47□□□□□ -0.25
HDAC7-226ENST00000547259 CYP4A11Q02928 519 aa13.47□□□□□ -0.25
HDAC7-226ENST00000547259 ZRSR1Q15695 479 aaKnown RBP13.47□□□□□ -0.25
HDAC7-226ENST00000547259 UTP14CQ5TAP6 766 aaKnown RBP13.47□□□□□ -0.25
HDAC7-226ENST00000547259 RESP18Q5W5W9 173 aa13.47□□□□□ -0.25
HDAC7-226ENST00000547259 SHC4Q6S5L8 630 aa13.47□□□□□ -0.25
HDAC7-226ENST00000547259 CABP7Q86V35 215 aa13.47□□□□□ -0.25
HDAC7-226ENST00000547259 LMBR1Q8WVP7 490 aa13.47□□□□□ -0.25
HDAC7-226ENST00000547259 SEPT1Q8WYJ6 367 aa13.47□□□□□ -0.25
HDAC7-226ENST00000547259 DYDC2Q96IM9 177 aa13.47□□□□□ -0.25
HDAC7-226ENST00000547259 CDK5RAP3Q96JB5 506 aa13.47□□□□□ -0.25
HDAC7-226ENST00000547259 POP1Q99575 1024 aaKnown RBP13.47□□□□□ -0.25
HDAC7-226ENST00000547259 EIF2AK1Q9BQI3 630 aaKnown RBP13.47□□□□□ -0.25
HDAC7-226ENST00000547259 KCNH6Q9H252 994 aa13.47□□□□□ -0.25
HDAC7-226ENST00000547259 SMARCAD1Q9H4L7 1026 aa13.47□□□□□ -0.25
HDAC7-226ENST00000547259 RNF216Q9NWF9 866 aaPredicted RBP13.47□□□□□ -0.25
HDAC7-226ENST00000547259 FAM13BQ9NYF5 915 aa13.47□□□□□ -0.25
HDAC7-226ENST00000547259 SQORQ9Y6N5 450 aa13.47□□□□□ -0.25
HDAC7-226ENST00000547259 KDM3AQ9Y4C1 1321 aa13.46□□□□□ -0.25
HDAC7-226ENST00000547259 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.46□□□□□ -0.25
HDAC7-226ENST00000547259 A0A1W2PQ27 194 aa13.46□□□□□ -0.25
HDAC7-226ENST00000547259 A0A1W2PQ64 194 aa13.46□□□□□ -0.25
HDAC7-226ENST00000547259 A0A1W2PQD8 194 aa13.46□□□□□ -0.25
HDAC7-226ENST00000547259 RRN3P2A6NIE6 340 aa13.46□□□□□ -0.25
HDAC7-226ENST00000547259 ATG7O95352 703 aa13.46□□□□□ -0.25
HDAC7-226ENST00000547259 PPFIA1Q13136 1202 aa13.46□□□□□ -0.25
HDAC7-226ENST00000547259 COL19A1Q14993 1142 aa13.46□□□□□ -0.25
HDAC7-226ENST00000547259 NAALADL2Q58DX5 795 aa13.46□□□□□ -0.25
HDAC7-226ENST00000547259 IER5Q5VY09 327 aa13.46□□□□□ -0.25
HDAC7-226ENST00000547259 FAM160B1Q5W0V3 765 aa13.46□□□□□ -0.25
HDAC7-226ENST00000547259 ABHD15Q6UXT9 468 aa13.46□□□□□ -0.25
HDAC7-226ENST00000547259 CCDC60Q8IWA6 550 aaPredicted RBP13.46□□□□□ -0.25
HDAC7-226ENST00000547259 FSIP1Q8NA03 581 aa13.46□□□□□ -0.25
HDAC7-226ENST00000547259 MRPS27Q92552 414 aaKnown RBP13.46□□□□□ -0.25
HDAC7-226ENST00000547259 CALML4Q96GE6 196 aa13.46□□□□□ -0.25
HDAC7-226ENST00000547259 EPSTI1Q96J88 318 aa13.46□□□□□ -0.25
HDAC7-226ENST00000547259 PLVAPQ9BX97 442 aa13.46□□□□□ -0.25
HDAC7-226ENST00000547259 FTHL17Q9BXU8 183 aa13.46□□□□□ -0.25
HDAC7-226ENST00000547259 AZI2Q9H6S1 392 aa13.46□□□□□ -0.25
HDAC7-226ENST00000547259 TUFT1Q9NNX1 390 aa13.46□□□□□ -0.25
HDAC7-226ENST00000547259 ZNF302Q9NR11 478 aa13.46□□□□□ -0.25
HDAC7-226ENST00000547259 GABBR1Q9UBS5 961 aa13.46□□□□□ -0.25
HDAC7-226ENST00000547259 CCDC39Q9UFE4 941 aa13.46□□□□□ -0.25
HDAC7-226ENST00000547259 IGSF9BQ9UPX0 1349 aa13.45□□□□□ -0.26
HDAC7-226ENST00000547259 POTEB3A0JP26 581 aa13.45□□□□□ -0.26
HDAC7-226ENST00000547259 GADD45BO75293 160 aaPredicted RBP13.45□□□□□ -0.26
HDAC7-226ENST00000547259 MED24O75448 989 aa13.45□□□□□ -0.26
HDAC7-226ENST00000547259 P4HBP07237 508 aaKnown RBP13.45□□□□□ -0.26
HDAC7-226ENST00000547259 CMA1P23946 247 aa13.45□□□□□ -0.26
HDAC7-226ENST00000547259 CTNNB1P35222 781 aa13.45□□□□□ -0.26
HDAC7-226ENST00000547259 BMPR1AP36894 532 aa13.45□□□□□ -0.26
HDAC7-226ENST00000547259 UBE2HP62256 183 aa13.45□□□□□ -0.26
HDAC7-226ENST00000547259 CTTNQ14247 550 aaKnown RBP13.45□□□□□ -0.26
HDAC7-226ENST00000547259 TCEAL5Q5H9L2 206 aa13.45□□□□□ -0.26
HDAC7-226ENST00000547259 SWSAP1Q6NVH7 229 aa13.45□□□□□ -0.26
HDAC7-226ENST00000547259 POTEBQ6S5H4 581 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms