RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 AKT3Q9Y243 479 aa11.6□□□□□ -0.55
BEST3-208ENST00000547208 WNT7AO00755 349 aa11.59□□□□□ -0.55
BEST3-208ENST00000547208 TBX3O15119 743 aa11.59□□□□□ -0.55
BEST3-208ENST00000547208 GPR182O15218 404 aa11.59□□□□□ -0.55
BEST3-208ENST00000547208 GRM6O15303 877 aa11.59□□□□□ -0.55
BEST3-208ENST00000547208 MMP1P03956 469 aa11.59□□□□□ -0.55
BEST3-208ENST00000547208 STAG3L1P0CL83 205 aa11.59□□□□□ -0.55
BEST3-208ENST00000547208 KRT2P35908 639 aa11.59□□□□□ -0.55
BEST3-208ENST00000547208 FAM189BP81408 668 aa11.59□□□□□ -0.55
BEST3-208ENST00000547208 TBC1D8BQ0IIM8 1120 aa11.59□□□□□ -0.55
BEST3-208ENST00000547208 CAMK1Q14012 370 aa11.59□□□□□ -0.55
BEST3-208ENST00000547208 AAK1Q2M2I8 961 aa11.59□□□□□ -0.55
BEST3-208ENST00000547208 SLC24A5Q71RS6 500 aa11.59□□□□□ -0.55
BEST3-208ENST00000547208 C1orf112Q9NSG2 853 aa11.59□□□□□ -0.55
BEST3-208ENST00000547208 SEPT9Q9UHD8 586 aaPredicted RBP11.59□□□□□ -0.55
BEST3-208ENST00000547208 RWDD3Q9Y3V2 267 aa11.59□□□□□ -0.55
BEST3-208ENST00000547208 BTBD18B2RXH4 712 aa11.58□□□□□ -0.56
BEST3-208ENST00000547208 DARSP14868 501 aaKnown RBP11.58□□□□□ -0.56
BEST3-208ENST00000547208 EIF4BP23588 611 aaKnown RBP11.58□□□□□ -0.56
BEST3-208ENST00000547208 TMOD1P28289 359 aa11.58□□□□□ -0.56
BEST3-208ENST00000547208 PSMC5P62195 406 aa11.58□□□□□ -0.56
BEST3-208ENST00000547208 PTPROQ16827 1216 aa11.58□□□□□ -0.56
BEST3-208ENST00000547208 MTERF2Q49AM1 385 aa11.58□□□□□ -0.56
BEST3-208ENST00000547208 PAN2Q504Q3 1202 aaKnown RBP11.58□□□□□ -0.56
BEST3-208ENST00000547208 TIGD5Q53EQ6 642 aa11.58□□□□□ -0.56
BEST3-208ENST00000547208 ODR4Q5SWX8 454 aa11.58□□□□□ -0.56
BEST3-208ENST00000547208 PLA2G4FQ68DD2 849 aa11.58□□□□□ -0.56
BEST3-208ENST00000547208 ZNF710Q8N1W2 664 aa11.58□□□□□ -0.56
BEST3-208ENST00000547208 P2RX5Q93086 422 aa11.58□□□□□ -0.56
BEST3-208ENST00000547208 ZNF668Q96K58 619 aaPredicted RBP11.58□□□□□ -0.56
BEST3-208ENST00000547208 MAP7D2Q96T17 732 aa11.58□□□□□ -0.56
BEST3-208ENST00000547208 C11orf84Q9BUA3 381 aaPredicted RBP11.58□□□□□ -0.56
BEST3-208ENST00000547208 PLVAPQ9BX97 442 aa11.58□□□□□ -0.56
BEST3-208ENST00000547208 UBE2ZQ9H832 354 aaPredicted RBP11.58□□□□□ -0.56
BEST3-208ENST00000547208 RNF19AQ9NV58 838 aa11.58□□□□□ -0.56
BEST3-208ENST00000547208 PLAGL2Q9UPG8 496 aa11.58□□□□□ -0.56
BEST3-208ENST00000547208 DENND3A2RUS2 1198 aa11.57□□□□□ -0.56
BEST3-208ENST00000547208 DDX11L8A8MPP1 907 aa11.57□□□□□ -0.56
BEST3-208ENST00000547208 MAFO75444 373 aaPredicted RBP11.57□□□□□ -0.56
BEST3-208ENST00000547208 DNAJB1P25685 340 aa11.57□□□□□ -0.56
BEST3-208ENST00000547208 QARSP47897 775 aaKnown RBP11.57□□□□□ -0.56
BEST3-208ENST00000547208 TCEAL5Q5H9L2 206 aa11.57□□□□□ -0.56
BEST3-208ENST00000547208 FAM102BQ5T8I3 360 aa11.57□□□□□ -0.56
BEST3-208ENST00000547208 DIS3L2Q8IYB7 885 aaKnown RBP11.57□□□□□ -0.56
BEST3-208ENST00000547208 ZNF579Q8NAF0 562 aaKnown RBP11.57□□□□□ -0.56
BEST3-208ENST00000547208 NAP1L4Q99733 375 aaKnown RBP11.57□□□□□ -0.56
BEST3-208ENST00000547208 LMAN2LQ9H0V9 348 aa11.57□□□□□ -0.56
BEST3-208ENST00000547208 NSUN3Q9H649 340 aaKnown RBP11.57□□□□□ -0.56
BEST3-208ENST00000547208 ELAC1Q9H777 363 aaKnown RBP11.57□□□□□ -0.56
BEST3-208ENST00000547208 ALG13Q9NP73 1137 aaKnown RBP11.57□□□□□ -0.56
BEST3-208ENST00000547208 TMEM161AQ9NX61 479 aa11.57□□□□□ -0.56
BEST3-208ENST00000547208 HCSTQ9UBK5 93 aa11.57□□□□□ -0.56
BEST3-208ENST00000547208 LIMCH1Q9UPQ0 1083 aa11.57□□□□□ -0.56
BEST3-208ENST00000547208 PCDHB7Q9Y5E2 793 aa11.57□□□□□ -0.56
BEST3-208ENST00000547208 C5orf42Q9H799 3197 aa11.57□□□□□ -0.56
BEST3-208ENST00000547208 CSDE1O75534 798 aaKnown RBP11.56□□□□□ -0.56
BEST3-208ENST00000547208 ITGB1P05556 798 aa11.56□□□□□ -0.56
BEST3-208ENST00000547208 P4HBP07237 508 aaKnown RBP11.56□□□□□ -0.56
BEST3-208ENST00000547208 FGFR1P11362 822 aa11.56□□□□□ -0.56
BEST3-208ENST00000547208 FGFR4P22455 802 aa11.56□□□□□ -0.56
BEST3-208ENST00000547208 FOSBP53539 338 aa11.56□□□□□ -0.56
BEST3-208ENST00000547208 NPEPPSP55786 919 aa11.56□□□□□ -0.56
BEST3-208ENST00000547208 EPHA7Q15375 998 aa11.56□□□□□ -0.56
BEST3-208ENST00000547208 LEXMQ3ZCV2 418 aa11.56□□□□□ -0.56
BEST3-208ENST00000547208 ALYREFQ86V81 257 aaKnown RBP11.56□□□□□ -0.56
BEST3-208ENST00000547208 C4orf19Q8IY42 314 aa11.56□□□□□ -0.56
BEST3-208ENST00000547208 SLFN12Q8IYM2 578 aa11.56□□□□□ -0.56
BEST3-208ENST00000547208 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.56□□□□□ -0.56
BEST3-208ENST00000547208 SPPL3Q8TCT6 385 aa11.56□□□□□ -0.56
BEST3-208ENST00000547208 NEK9Q8TD19 979 aa11.56□□□□□ -0.56
BEST3-208ENST00000547208 LXNQ9BS40 222 aa11.56□□□□□ -0.56
BEST3-208ENST00000547208 BRMS1Q9HCU9 246 aa11.56□□□□□ -0.56
BEST3-208ENST00000547208 CYP26B1Q9NR63 512 aa11.56□□□□□ -0.56
BEST3-208ENST00000547208 RGL1Q9NZL6 768 aa11.56□□□□□ -0.56
BEST3-208ENST00000547208 LRFN2Q9ULH4 789 aa11.56□□□□□ -0.56
BEST3-208ENST00000547208 TDRD15B5MCY1 1934 aaKnown RBP11.56□□□□□ -0.56
BEST3-208ENST00000547208 A0A087WZ62 844 aa11.55□□□□□ -0.56
BEST3-208ENST00000547208 TBKBP1A7MCY6 615 aa11.55□□□□□ -0.56
BEST3-208ENST00000547208 ZBTB39O15060 712 aa11.55□□□□□ -0.56
BEST3-208ENST00000547208 ATF7P17544 494 aaPredicted RBP11.55□□□□□ -0.56
BEST3-208ENST00000547208 IBSPP21815 317 aaPredicted RBP11.55□□□□□ -0.56
BEST3-208ENST00000547208 KCNA5P22460 613 aa11.55□□□□□ -0.56
BEST3-208ENST00000547208 LTBRP36941 435 aa11.55□□□□□ -0.56
BEST3-208ENST00000547208 RBM25P49756 843 aaKnown RBP11.55□□□□□ -0.56
BEST3-208ENST00000547208 HYAL1Q12794 435 aa11.55□□□□□ -0.56
BEST3-208ENST00000547208 CTC1Q2NKJ3 1217 aa11.55□□□□□ -0.56
BEST3-208ENST00000547208 NAALADL2Q58DX5 795 aa11.55□□□□□ -0.56
BEST3-208ENST00000547208 NCAPH2Q6IBW4 605 aa11.55□□□□□ -0.56
BEST3-208ENST00000547208 LRRC55Q6ZSA7 311 aa11.55□□□□□ -0.56
BEST3-208ENST00000547208 ZNF598Q86UK7 904 aaKnown RBP11.55□□□□□ -0.56
BEST3-208ENST00000547208 ECHDC2Q86YB7 292 aa11.55□□□□□ -0.56
BEST3-208ENST00000547208 KSR1Q8IVT5 923 aa11.55□□□□□ -0.56
BEST3-208ENST00000547208 CCDC83Q8IWF9 413 aa11.55□□□□□ -0.56
BEST3-208ENST00000547208 KLHL23Q8NBE8 558 aa11.55□□□□□ -0.56
BEST3-208ENST00000547208 IL27Q8NEV9 243 aa11.55□□□□□ -0.56
BEST3-208ENST00000547208 NLRP7Q8WX94 980 aa11.55□□□□□ -0.56
BEST3-208ENST00000547208 SPOCK2Q92563 424 aa11.55□□□□□ -0.56
BEST3-208ENST00000547208 PABPC5Q96DU9 382 aaKnown RBP11.55□□□□□ -0.56
BEST3-208ENST00000547208 DYDC2Q96IM9 177 aa11.55□□□□□ -0.56
BEST3-208ENST00000547208 CASD1Q96PB1 797 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms