RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 EIF4BP23588 611 aaKnown RBP21.04■□□□□ 0.96
CHERP-204ENST00000546538 SMAD4Q13485 552 aaKnown RBP21.04■□□□□ 0.96
CHERP-204ENST00000546538 FAM43BQ6ZT52 329 aaPredicted RBP21.04■□□□□ 0.96
CHERP-204ENST00000546538 TRIM22Q8IYM9 498 aa21.04■□□□□ 0.96
CHERP-204ENST00000546538 ELAC1Q9H777 363 aaKnown RBP21.04■□□□□ 0.96
CHERP-204ENST00000546538 TCEAL9Q9UHQ7 104 aa21.04■□□□□ 0.96
CHERP-204ENST00000546538 KCNJ14Q9UNX9 436 aa21.04■□□□□ 0.96
CHERP-204ENST00000546538 FGF18O76093 207 aa21.04■□□□□ 0.96
CHERP-204ENST00000546538 EYA4O95677 639 aa21.04■□□□□ 0.96
CHERP-204ENST00000546538 DARSP14868 501 aaKnown RBP21.04■□□□□ 0.96
CHERP-204ENST00000546538 ATF7P17544 494 aaPredicted RBP21.04■□□□□ 0.96
CHERP-204ENST00000546538 SFNP31947 248 aa21.04■□□□□ 0.96
CHERP-204ENST00000546538 JAK3P52333 1124 aa21.04■□□□□ 0.96
CHERP-204ENST00000546538 SCRN1Q12765 414 aa21.04■□□□□ 0.96
CHERP-204ENST00000546538 CLLU1OSQ5K130 101 aa21.04■□□□□ 0.96
CHERP-204ENST00000546538 MAP7D2Q96T17 732 aa21.04■□□□□ 0.96
CHERP-204ENST00000546538 NIFKQ9BYG3 293 aaKnown RBP21.04■□□□□ 0.96
CHERP-204ENST00000546538 ATP6V0A4Q9HBG4 840 aa21.04■□□□□ 0.96
CHERP-204ENST00000546538 NRBP2Q9NSY0 501 aa21.04■□□□□ 0.96
CHERP-204ENST00000546538 CD207Q9UJ71 328 aa21.04■□□□□ 0.96
CHERP-204ENST00000546538 BARX2Q9UMQ3 279 aaPredicted RBP21.04■□□□□ 0.96
CHERP-204ENST00000546538 IGKV6-21A0A0C4DH24 114 aa21.03■□□□□ 0.96
CHERP-204ENST00000546538 FSCN2O14926 492 aa21.03■□□□□ 0.96
CHERP-204ENST00000546538 PER2O15055 1255 aa21.03■□□□□ 0.96
CHERP-204ENST00000546538 PBX3P40426 434 aa21.03■□□□□ 0.96
CHERP-204ENST00000546538 ODR4Q5SWX8 454 aa21.03■□□□□ 0.96
CHERP-204ENST00000546538 SMRP1Q8NCR6 262 aa21.03■□□□□ 0.96
CHERP-204ENST00000546538 EML1O00423 815 aa21.02■□□□□ 0.96
CHERP-204ENST00000546538 NDUFV1P49821 464 aa21.02■□□□□ 0.96
CHERP-204ENST00000546538 INF2Q27J81 1249 aa21.02■□□□□ 0.96
CHERP-204ENST00000546538 MIER3Q7Z3K6 550 aa21.02■□□□□ 0.96
CHERP-204ENST00000546538 ZNF598Q86UK7 904 aaKnown RBP21.02■□□□□ 0.96
CHERP-204ENST00000546538 ECHDC2Q86YB7 292 aa21.02■□□□□ 0.96
CHERP-204ENST00000546538 RDM1Q8NG50 284 aa21.02■□□□□ 0.96
CHERP-204ENST00000546538 TMEM117Q9H0C3 514 aa21.02■□□□□ 0.96
CHERP-204ENST00000546538 PDRG1Q9NUG6 133 aa21.02■□□□□ 0.96
CHERP-204ENST00000546538 TPCN1Q9ULQ1 816 aa21.02■□□□□ 0.96
CHERP-204ENST00000546538 FAM50BQ9Y247 325 aa21.02■□□□□ 0.96
CHERP-204ENST00000546538 PCDHB12Q9Y5F1 795 aa21.02■□□□□ 0.96
CHERP-204ENST00000546538 CPLX1O14810 134 aa21.01■□□□□ 0.95
CHERP-204ENST00000546538 DCXO43602 365 aa21.01■□□□□ 0.95
CHERP-204ENST00000546538 CTDNEP1O95476 244 aa21.01■□□□□ 0.95
CHERP-204ENST00000546538 TMOD1P28289 359 aa21.01■□□□□ 0.95
CHERP-204ENST00000546538 UBE3AQ05086 875 aa21.01■□□□□ 0.95
CHERP-204ENST00000546538 TBC1D8BQ0IIM8 1120 aa21.01■□□□□ 0.95
CHERP-204ENST00000546538 COASYQ13057 564 aa21.01■□□□□ 0.95
CHERP-204ENST00000546538 MTERF2Q49AM1 385 aa21.01■□□□□ 0.95
CHERP-204ENST00000546538 SPOUT1Q5T280 376 aaKnown RBP21.01■□□□□ 0.95
CHERP-204ENST00000546538 MOXD1Q6UVY6 613 aa21.01■□□□□ 0.95
CHERP-204ENST00000546538 ANO5Q75V66 913 aa21.01■□□□□ 0.95
CHERP-204ENST00000546538 OXER1Q8TDS5 423 aa21.01■□□□□ 0.95
CHERP-204ENST00000546538 PHF20Q9BVI0 1012 aa21.01■□□□□ 0.95
CHERP-204ENST00000546538 TLR9Q9NR96 1032 aa21.01■□□□□ 0.95
CHERP-204ENST00000546538 WRAP73Q9P2S5 460 aaPredicted RBP21.01■□□□□ 0.95
CHERP-204ENST00000546538 SEPT9Q9UHD8 586 aaPredicted RBP21.01■□□□□ 0.95
CHERP-204ENST00000546538 VAV3Q9UKW4 847 aa21.01■□□□□ 0.95
CHERP-204ENST00000546538 TECTAO75443 2155 aa21■□□□□ 0.95
CHERP-204ENST00000546538 PRR33A8MZF0 331 aa21■□□□□ 0.95
CHERP-204ENST00000546538 KCNC3Q14003 757 aa21■□□□□ 0.95
CHERP-204ENST00000546538 XKR3Q5GH77 459 aa21■□□□□ 0.95
CHERP-204ENST00000546538 EARS2Q5JPH6 523 aaKnown RBP21■□□□□ 0.95
CHERP-204ENST00000546538 C22orf23Q9BZE7 217 aa21■□□□□ 0.95
CHERP-204ENST00000546538 KCNMB3Q9NPA1 279 aa21■□□□□ 0.95
CHERP-204ENST00000546538 DDX25Q9UHL0 483 aaKnown RBP21■□□□□ 0.95
CHERP-204ENST00000546538 ALADP13716 330 aa20.99■□□□□ 0.95
CHERP-204ENST00000546538 NONOQ15233 471 aaKnown RBP eCLIP20.99■□□□□ 0.95
CHERP-204ENST00000546538 DUSP6Q16828 381 aa20.99■□□□□ 0.95
CHERP-204ENST00000546538 PLA2G4FQ68DD2 849 aa20.99■□□□□ 0.95
CHERP-204ENST00000546538 GALNT17Q6IS24 598 aa20.99■□□□□ 0.95
CHERP-204ENST00000546538 KSR1Q8IVT5 923 aa20.99■□□□□ 0.95
CHERP-204ENST00000546538 THNSL1Q8IYQ7 743 aa20.99■□□□□ 0.95
CHERP-204ENST00000546538 ZNF579Q8NAF0 562 aaKnown RBP20.99■□□□□ 0.95
CHERP-204ENST00000546538 TLE6Q9H808 572 aa20.99■□□□□ 0.95
CHERP-204ENST00000546538 MUTYHQ9UIF7 546 aa20.99■□□□□ 0.95
CHERP-204ENST00000546538 A0A0U1RQF3 1178 aa20.98■□□□□ 0.95
CHERP-204ENST00000546538 HIDE1A8MVS5 230 aa20.98■□□□□ 0.95
CHERP-204ENST00000546538 LAG3P18627 525 aa20.98■□□□□ 0.95
CHERP-204ENST00000546538 PLCB3Q01970 1234 aa20.98■□□□□ 0.95
CHERP-204ENST00000546538 KCNT2Q6UVM3 1135 aa20.98■□□□□ 0.95
CHERP-204ENST00000546538 NLRP7Q8WX94 980 aa20.98■□□□□ 0.95
CHERP-204ENST00000546538 FAM122AQ96E09 287 aa20.98■□□□□ 0.95
CHERP-204ENST00000546538 AAASQ9NRG9 546 aa20.98■□□□□ 0.95
CHERP-204ENST00000546538 USP15Q9Y4E8 981 aaPredicted RBP20.98■□□□□ 0.95
CHERP-204ENST00000546538 ARIH1Q9Y4X5 557 aaPredicted RBP20.98■□□□□ 0.95
CHERP-204ENST00000546538 ZNF318Q5VUA4 2279 aa20.98■□□□□ 0.95
CHERP-204ENST00000546538 STK36Q9NRP7 1315 aa20.97■□□□□ 0.95
CHERP-204ENST00000546538 A0A087WZ62 844 aa20.97■□□□□ 0.95
CHERP-204ENST00000546538 FAM205CA6NFA0 338 aa20.97■□□□□ 0.95
CHERP-204ENST00000546538 PFKFB2O60825 505 aa20.97■□□□□ 0.95
CHERP-204ENST00000546538 MAFO75444 373 aaPredicted RBP20.97■□□□□ 0.95
CHERP-204ENST00000546538 ZSCAN20P17040 1043 aaPredicted RBP20.97■□□□□ 0.95
CHERP-204ENST00000546538 LETM2Q2VYF4 491 aa20.97■□□□□ 0.95
CHERP-204ENST00000546538 KRT25Q7Z3Z0 450 aa20.97■□□□□ 0.95
CHERP-204ENST00000546538 RNF135Q8IUD6 432 aa20.97■□□□□ 0.95
CHERP-204ENST00000546538 FAM177A1Q8N128 213 aaPredicted RBP20.97■□□□□ 0.95
CHERP-204ENST00000546538 ZNF710Q8N1W2 664 aa20.97■□□□□ 0.95
CHERP-204ENST00000546538 LRRC43Q8N309 656 aa20.97■□□□□ 0.95
CHERP-204ENST00000546538 RNF169Q8NCN4 708 aa20.97■□□□□ 0.95
CHERP-204ENST00000546538 HELQQ8TDG4 1101 aa20.97■□□□□ 0.95
CHERP-204ENST00000546538 MICAL1Q8TDZ2 1067 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms