RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 ERGIC2Q96RQ1 377 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 TACO1Q9BSH4 297 aaKnown RBP10.6□□□□□ -0.71
TRAF1-203ENST00000546084 EHMT1Q9H9B1 1298 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 MYH10P35580 1976 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 PVALEFA0A1B0GWK0 134 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 MSH4O15457 936 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 SART1O43290 800 aaKnown RBP10.6□□□□□ -0.71
TRAF1-203ENST00000546084 EVI5O60447 810 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 PPP1R2P41236 205 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 GALCP54803 685 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 E2F5Q15329 346 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 DAB2IPQ5VWQ8 1189 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 ZNF653Q96CK0 615 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 CEP170P1Q96L14 293 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 TLR10Q9BXR5 811 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 LARSQ9P2J5 1176 aaKnown RBP10.6□□□□□ -0.71
TRAF1-203ENST00000546084 SEPT9Q9UHD8 586 aaPredicted RBP10.6□□□□□ -0.71
TRAF1-203ENST00000546084 TTC7AQ9ULT0 858 aaPredicted RBP10.6□□□□□ -0.71
TRAF1-203ENST00000546084 SCN11AQ9UI33 1791 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 SPEF2Q9C093 1822 aa10.6□□□□□ -0.71
TRAF1-203ENST00000546084 PIK3R2O00459 728 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 HDLBPQ00341 1268 aaKnown RBP10.59□□□□□ -0.71
TRAF1-203ENST00000546084 CALCOCO2Q13137 446 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 SEL1L2Q5TEA6 688 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 RPAINQ86UA6 219 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 ARFGAP2Q8N6H7 521 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 GDAP1Q8TB36 358 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 C1orf54Q8WWF1 131 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 TEKT3Q9BXF9 490 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 CEP72Q9P209 647 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 EMSYQ7Z589 1322 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 RASSF10A6NK89 507 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 A6NNZ2 444 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 MEFVO15553 781 aaPredicted RBP10.59□□□□□ -0.71
TRAF1-203ENST00000546084 CYP26A1O43174 497 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 TUBB8Q3ZCM7 444 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 CENPPQ6IPU0 288 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 PADI6Q6TGC4 694 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 CHURC1Q8WUH1 139 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 ACSF2Q96CM8 615 aaPredicted RBP10.59□□□□□ -0.71
TRAF1-203ENST00000546084 NCAPGQ9BPX3 1015 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 STK38LQ9Y2H1 464 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 EP400Q96L91 3159 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 TAF1P21675 1872 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 PGRMC1O00264 195 aaKnown RBP10.59□□□□□ -0.71
TRAF1-203ENST00000546084 HIP1RO75146 1068 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 PPP1R37O75864 691 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 FTLP02792 175 aaPredicted RBP10.59□□□□□ -0.71
TRAF1-203ENST00000546084 NPR1P16066 1061 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 TMEM179Q6ZVK1 233 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 ZNF571Q7Z3V5 609 aaPredicted RBP10.59□□□□□ -0.71
TRAF1-203ENST00000546084 NLRX1Q86UT6 975 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 KAT5Q92993 513 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 TBC1D31Q96DN5 1066 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 CCT8L2Q96SF2 557 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 TTYH3Q9C0H2 523 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 TSKSQ9UJT2 592 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 FBXL5Q9UKA1 691 aa10.59□□□□□ -0.71
TRAF1-203ENST00000546084 NOC2LQ9Y3T9 749 aaKnown RBP10.59□□□□□ -0.71
TRAF1-203ENST00000546084 F5H423 210 aaPredicted RBP10.58□□□□□ -0.72
TRAF1-203ENST00000546084 GOLGA8SH3BPF8 625 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 PRPHP41219 470 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 PPP4CP60510 307 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 ACTN3Q08043 901 aaPredicted RBP10.58□□□□□ -0.72
TRAF1-203ENST00000546084 LDHDQ86WU2 507 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 METTL13Q8N6R0 699 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 CPSF2Q9P2I0 782 aaKnown RBP10.58□□□□□ -0.72
TRAF1-203ENST00000546084 SWAP70Q9UH65 585 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 C4AP0C0L4 1744 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 C4BP0C0L5 1744 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 GOLGA8MH3BSY2 632 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 FGFR4P22455 802 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 MAGOHP61326 146 aaKnown RBP10.58□□□□□ -0.72
TRAF1-203ENST00000546084 KLHDC7AQ5VTJ3 777 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 APOBEC3HQ6NTF7 200 aaKnown RBP10.58□□□□□ -0.72
TRAF1-203ENST00000546084 EGFL6Q8IUX8 553 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 NIM1KQ8IY84 436 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 SUPT20HQ8NEM7 779 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 WDR11Q9BZH6 1224 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 TOPORSQ9NS56 1045 aaPredicted RBP10.58□□□□□ -0.72
TRAF1-203ENST00000546084 NID2Q14112 1375 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 BCRP11274 1271 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 YY1P25490 414 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 VPS72Q15906 364 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 FAM133BQ5BKY9 247 aaKnown RBP10.58□□□□□ -0.72
TRAF1-203ENST00000546084 SAMD7Q7Z3H4 446 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 NLRP14Q86W24 1093 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 ZNF473Q8WTR7 871 aaKnown RBP10.58□□□□□ -0.72
TRAF1-203ENST00000546084 PPP1R13LQ8WUF5 828 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 SLC20A1Q8WUM9 679 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 MASTLQ96GX5 879 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 CBWD1Q9BRT8 395 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 FAM213AQ9BRX8 229 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 PRDM16Q9HAZ2 1276 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 BAIAP2L1Q9UHR4 511 aa10.58□□□□□ -0.72
TRAF1-203ENST00000546084 MAGED2Q9UNF1 606 aaPredicted RBP10.58□□□□□ -0.72
TRAF1-203ENST00000546084 ZC3H4Q9UPT8 1303 aaKnown RBP10.58□□□□□ -0.72
TRAF1-203ENST00000546084 POC1B-GALNT4F8VUJ3 575 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 PI4K2BG5E9Z4 385 aa10.57□□□□□ -0.72
TRAF1-203ENST00000546084 SHOX2O60902 331 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms