RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 RSPH10BP0C881 870 aa13.04□□□□□ -0.32
SNHG1-221ENST00000544983 PFKFB1P16118 471 aa13.04□□□□□ -0.32
SNHG1-221ENST00000544983 CLCN3P51790 818 aa13.04□□□□□ -0.32
SNHG1-221ENST00000544983 MRPS6P82932 125 aaKnown RBP13.04□□□□□ -0.32
SNHG1-221ENST00000544983 TFDP1Q14186 410 aa13.04□□□□□ -0.32
SNHG1-221ENST00000544983 PCBP1Q15365 356 aaKnown RBP eCLIP13.04□□□□□ -0.32
SNHG1-221ENST00000544983 NAALADL2Q58DX5 795 aa13.04□□□□□ -0.32
SNHG1-221ENST00000544983 ODR4Q5SWX8 454 aa13.04□□□□□ -0.32
SNHG1-221ENST00000544983 MFSD5Q6N075 450 aa13.04□□□□□ -0.32
SNHG1-221ENST00000544983 KANK3Q6NY19 840 aa13.04□□□□□ -0.32
SNHG1-221ENST00000544983 LRRC8DQ7L1W4 858 aa13.04□□□□□ -0.32
SNHG1-221ENST00000544983 TMEM199Q8N511 208 aa13.04□□□□□ -0.32
SNHG1-221ENST00000544983 TRIM43Q96BQ3 446 aaPredicted RBP13.04□□□□□ -0.32
SNHG1-221ENST00000544983 SH2D3AQ9BRG2 576 aa13.04□□□□□ -0.32
SNHG1-221ENST00000544983 INO80BQ9C086 356 aaPredicted RBP13.04□□□□□ -0.32
SNHG1-221ENST00000544983 FAM49AQ9H0Q0 323 aaPredicted RBP13.04□□□□□ -0.32
SNHG1-221ENST00000544983 KBTBD4Q9NVX7 518 aa13.04□□□□□ -0.32
SNHG1-221ENST00000544983 PHLPP2Q6ZVD8 1323 aa13.04□□□□□ -0.32
SNHG1-221ENST00000544983 ARID2Q68CP9 1835 aa13.04□□□□□ -0.32
SNHG1-221ENST00000544983 A0A087X0B3 334 aa13.03□□□□□ -0.32
SNHG1-221ENST00000544983 A0A1B0GVL5 298 aa13.03□□□□□ -0.32
SNHG1-221ENST00000544983 PFKMP08237 780 aa13.03□□□□□ -0.32
SNHG1-221ENST00000544983 IQCF3P0C7M6 154 aa13.03□□□□□ -0.32
SNHG1-221ENST00000544983 ABCD1P33897 745 aa13.03□□□□□ -0.32
SNHG1-221ENST00000544983 ARL2P36404 184 aa13.03□□□□□ -0.32
SNHG1-221ENST00000544983 CRYBB1P53674 252 aaPredicted RBP13.03□□□□□ -0.32
SNHG1-221ENST00000544983 FAM160A1Q05DH4 1040 aa13.03□□□□□ -0.32
SNHG1-221ENST00000544983 MCM6Q14566 821 aa13.03□□□□□ -0.32
SNHG1-221ENST00000544983 CNNM4Q6P4Q7 775 aa13.03□□□□□ -0.32
SNHG1-221ENST00000544983 GPBP1Q86WP2 473 aa13.03□□□□□ -0.32
SNHG1-221ENST00000544983 RPUSD2Q8IZ73 545 aaKnown RBP13.03□□□□□ -0.32
SNHG1-221ENST00000544983 LRRC71Q8N4P6 559 aa13.03□□□□□ -0.32
SNHG1-221ENST00000544983 PRPF31Q8WWY3 499 aaKnown RBP13.03□□□□□ -0.32
SNHG1-221ENST00000544983 DHX58Q96C10 678 aa13.03□□□□□ -0.32
SNHG1-221ENST00000544983 IFT74Q96LB3 600 aa13.03□□□□□ -0.32
SNHG1-221ENST00000544983 LBHD1Q9BQE6 289 aaPredicted RBP13.03□□□□□ -0.32
SNHG1-221ENST00000544983 NFKBIZQ9BYH8 718 aa13.03□□□□□ -0.32
SNHG1-221ENST00000544983 PANK2Q9BZ23 570 aa13.03□□□□□ -0.32
SNHG1-221ENST00000544983 CELF4Q9BZC1 486 aaKnown RBP13.03□□□□□ -0.32
SNHG1-221ENST00000544983 XPNPEP1Q9NQW7 623 aa13.03□□□□□ -0.32
SNHG1-221ENST00000544983 COL4A3BPQ9Y5P4 624 aa13.03□□□□□ -0.32
SNHG1-221ENST00000544983 TRPV2Q9Y5S1 764 aa13.03□□□□□ -0.32
SNHG1-221ENST00000544983 A0A087WWV3 80 aa13.02□□□□□ -0.33
SNHG1-221ENST00000544983 H0YCG3 227 aa13.02□□□□□ -0.33
SNHG1-221ENST00000544983 GPR32O75388 356 aa13.02□□□□□ -0.33
SNHG1-221ENST00000544983 ZNF202O95125 648 aa13.02□□□□□ -0.33
SNHG1-221ENST00000544983 KRT18P05783 430 aaKnown RBP13.02□□□□□ -0.33
SNHG1-221ENST00000544983 NAMPTP43490 491 aa13.02□□□□□ -0.33
SNHG1-221ENST00000544983 GPC3P51654 580 aa13.02□□□□□ -0.33
SNHG1-221ENST00000544983 NDUFA8P51970 172 aa13.02□□□□□ -0.33
SNHG1-221ENST00000544983 NLRP11P59045 1033 aaKnown RBP13.02□□□□□ -0.33
SNHG1-221ENST00000544983 MGAT3Q09327 533 aa13.02□□□□□ -0.33
SNHG1-221ENST00000544983 LAMTOR4Q0VGL1 99 aa13.02□□□□□ -0.33
SNHG1-221ENST00000544983 PPIGQ13427 754 aaKnown RBP eCLIP13.02□□□□□ -0.33
SNHG1-221ENST00000544983 MKRN4PQ13434 485 aaPredicted RBP13.02□□□□□ -0.33
SNHG1-221ENST00000544983 ZNF618Q5T7W0 954 aa13.02□□□□□ -0.33
SNHG1-221ENST00000544983 FAM102BQ5T8I3 360 aa13.02□□□□□ -0.33
SNHG1-221ENST00000544983 SH3RF1Q7Z6J0 888 aa13.02□□□□□ -0.33
SNHG1-221ENST00000544983 RHPN2Q8IUC4 686 aa13.02□□□□□ -0.33
SNHG1-221ENST00000544983 ELOA2Q8IYF1 753 aaPredicted RBP13.02□□□□□ -0.33
SNHG1-221ENST00000544983 SLC17A8Q8NDX2 589 aa13.02□□□□□ -0.33
SNHG1-221ENST00000544983 WNT8BQ93098 351 aa13.02□□□□□ -0.33
SNHG1-221ENST00000544983 TMEM143Q96AN5 459 aa13.02□□□□□ -0.33
SNHG1-221ENST00000544983 TIGD1Q96MW7 591 aa13.02□□□□□ -0.33
SNHG1-221ENST00000544983 RUSC1Q9BVN2 902 aa13.02□□□□□ -0.33
SNHG1-221ENST00000544983 GCOM2Q9BZD3 368 aaPredicted RBP13.02□□□□□ -0.33
SNHG1-221ENST00000544983 POLR3FQ9H1D9 316 aaPredicted RBP13.02□□□□□ -0.33
SNHG1-221ENST00000544983 ADAMTS10Q9H324 1103 aa13.02□□□□□ -0.33
SNHG1-221ENST00000544983 LARSQ9P2J5 1176 aaKnown RBP13.02□□□□□ -0.33
SNHG1-221ENST00000544983 HOOK1Q9UJC3 728 aaKnown RBP13.02□□□□□ -0.33
SNHG1-221ENST00000544983 CDY2AQ9Y6F7 541 aa13.02□□□□□ -0.33
SNHG1-221ENST00000544983 PRPF40AO75400 957 aaKnown RBP13.01□□□□□ -0.33
SNHG1-221ENST00000544983 CHRNA1P02708 482 aa13.01□□□□□ -0.33
SNHG1-221ENST00000544983 VTNP04004 478 aa13.01□□□□□ -0.33
SNHG1-221ENST00000544983 EIF4BP23588 611 aaKnown RBP13.01□□□□□ -0.33
SNHG1-221ENST00000544983 CYP2C18P33260 490 aa13.01□□□□□ -0.33
SNHG1-221ENST00000544983 PHKA2P46019 1235 aa13.01□□□□□ -0.33
SNHG1-221ENST00000544983 SMTNP53814 917 aa13.01□□□□□ -0.33
SNHG1-221ENST00000544983 DMP1Q13316 513 aaPredicted RBP13.01□□□□□ -0.33
SNHG1-221ENST00000544983 ARSHQ5FYA8 562 aa13.01□□□□□ -0.33
SNHG1-221ENST00000544983 SRGAP1Q7Z6B7 1085 aa13.01□□□□□ -0.33
SNHG1-221ENST00000544983 IFNLR1Q8IU57 520 aaPredicted RBP13.01□□□□□ -0.33
SNHG1-221ENST00000544983 FMR1NBQ8N0W7 255 aaPredicted RBP13.01□□□□□ -0.33
SNHG1-221ENST00000544983 CNNM3Q8NE01 707 aa13.01□□□□□ -0.33
SNHG1-221ENST00000544983 LRRC15Q8TF66 581 aa13.01□□□□□ -0.33
SNHG1-221ENST00000544983 NLRP7Q8WX94 980 aa13.01□□□□□ -0.33
SNHG1-221ENST00000544983 DDX12PQ92771 950 aa13.01□□□□□ -0.33
SNHG1-221ENST00000544983 ZBTB10Q96DT7 871 aa13.01□□□□□ -0.33
SNHG1-221ENST00000544983 SCLT1Q96NL6 688 aa13.01□□□□□ -0.33
SNHG1-221ENST00000544983 C7orf25Q9BPX7 421 aa13.01□□□□□ -0.33
SNHG1-221ENST00000544983 NTPCRQ9BSD7 190 aaKnown RBP13.01□□□□□ -0.33
SNHG1-221ENST00000544983 PPP1R12CQ9BZL4 782 aa13.01□□□□□ -0.33
SNHG1-221ENST00000544983 C2orf40Q9H1Z8 148 aa13.01□□□□□ -0.33
SNHG1-221ENST00000544983 SEL1LQ9UBV2 794 aa13.01□□□□□ -0.33
SNHG1-221ENST00000544983 CUL9Q8IWT3 2517 aa13.01□□□□□ -0.33
SNHG1-221ENST00000544983 GPR182O15218 404 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 ACTN4O43707 911 aaKnown RBP13□□□□□ -0.33
SNHG1-221ENST00000544983 HIP1RO75146 1068 aa13□□□□□ -0.33
SNHG1-221ENST00000544983 TBCAO75347 108 aaKnown RBP13□□□□□ -0.33
SNHG1-221ENST00000544983 FAM13AO94988 1023 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms