RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 ANKRD54Q6NXT1 300 aa18.33■□□□□ 0.52
DDX55-212ENST00000544738 MTHFD1LQ6UB35 978 aa18.33■□□□□ 0.52
DDX55-212ENST00000544738 CCDC60Q8IWA6 550 aaPredicted RBP18.33■□□□□ 0.52
DDX55-212ENST00000544738 CRIPAKQ8N1N5 446 aa18.33■□□□□ 0.52
DDX55-212ENST00000544738 TRAPPC12Q8WVT3 735 aa18.33■□□□□ 0.52
DDX55-212ENST00000544738 MFSD1Q9H3U5 465 aa18.33■□□□□ 0.52
DDX55-212ENST00000544738 PDRG1Q9NUG6 133 aa18.33■□□□□ 0.52
DDX55-212ENST00000544738 SORCS3Q9UPU3 1222 aa18.33■□□□□ 0.52
DDX55-212ENST00000544738 NR2E1Q9Y466 385 aa18.33■□□□□ 0.52
DDX55-212ENST00000544738 TRPV2Q9Y5S1 764 aa18.33■□□□□ 0.52
DDX55-212ENST00000544738 DMXL1Q9Y485 3027 aa18.33■□□□□ 0.52
DDX55-212ENST00000544738 MYO10Q9HD67 2058 aa18.32■□□□□ 0.52
DDX55-212ENST00000544738 KDM3AQ9Y4C1 1321 aa18.32■□□□□ 0.52
DDX55-212ENST00000544738 KLRC1P26715 233 aa18.32■□□□□ 0.52
DDX55-212ENST00000544738 UBE3AQ05086 875 aa18.32■□□□□ 0.52
DDX55-212ENST00000544738 SYCE2Q6PIF2 218 aa18.32■□□□□ 0.52
DDX55-212ENST00000544738 CKAP2LQ8IYA6 745 aa18.32■□□□□ 0.52
DDX55-212ENST00000544738 RASGRP4Q8TDF6 673 aa18.32■□□□□ 0.52
DDX55-212ENST00000544738 ZBTB10Q96DT7 871 aa18.32■□□□□ 0.52
DDX55-212ENST00000544738 FTHL17Q9BXU8 183 aa18.32■□□□□ 0.52
DDX55-212ENST00000544738 CELF4Q9BZC1 486 aaKnown RBP18.32■□□□□ 0.52
DDX55-212ENST00000544738 SMOC2Q9H3U7 446 aa18.32■□□□□ 0.52
DDX55-212ENST00000544738 PCDHA10Q9Y5I2 948 aa18.32■□□□□ 0.52
DDX55-212ENST00000544738 MAFBQ9Y5Q3 323 aaPredicted RBP18.32■□□□□ 0.52
DDX55-212ENST00000544738 ZNF292O60281 2723 aa18.31■□□□□ 0.52
DDX55-212ENST00000544738 FSD2A1L4K1 749 aa18.31■□□□□ 0.52
DDX55-212ENST00000544738 FGF18O76093 207 aa18.31■□□□□ 0.52
DDX55-212ENST00000544738 GALNT17Q6IS24 598 aa18.31■□□□□ 0.52
DDX55-212ENST00000544738 THNSL1Q8IYQ7 743 aa18.31■□□□□ 0.52
DDX55-212ENST00000544738 BBXQ8WY36 941 aaPredicted RBP18.31■□□□□ 0.52
DDX55-212ENST00000544738 RIT2Q99578 217 aa18.31■□□□□ 0.52
DDX55-212ENST00000544738 AAASQ9NRG9 546 aa18.31■□□□□ 0.52
DDX55-212ENST00000544738 CDH22Q9UJ99 828 aa18.31■□□□□ 0.52
DDX55-212ENST00000544738 PADI3Q9ULW8 664 aa18.31■□□□□ 0.52
DDX55-212ENST00000544738 PCDHA4Q9UN74 947 aa18.31■□□□□ 0.52
DDX55-212ENST00000544738 IGSF9BQ9UPX0 1349 aa18.3■□□□□ 0.52
DDX55-212ENST00000544738 MED19A0JLT2 244 aaPredicted RBP18.3■□□□□ 0.52
DDX55-212ENST00000544738 CDKL5O76039 1030 aa18.3■□□□□ 0.52
DDX55-212ENST00000544738 TMEM62Q0P6H9 643 aa18.3■□□□□ 0.52
DDX55-212ENST00000544738 STK3Q13188 491 aa18.3■□□□□ 0.52
DDX55-212ENST00000544738 PLPP4Q5VZY2 271 aa18.3■□□□□ 0.52
DDX55-212ENST00000544738 TMEM184AQ6ZMB5 413 aa18.3■□□□□ 0.52
DDX55-212ENST00000544738 LENG9Q96B70 501 aa18.3■□□□□ 0.52
DDX55-212ENST00000544738 SAMM50Q9Y512 469 aa18.3■□□□□ 0.52
DDX55-212ENST00000544738 PCDHB7Q9Y5E2 793 aa18.3■□□□□ 0.52
DDX55-212ENST00000544738 TBKBP1A7MCY6 615 aa18.29■□□□□ 0.52
DDX55-212ENST00000544738 WDR64B1ANS9 1081 aa18.29■□□□□ 0.52
DDX55-212ENST00000544738 C2CD4DB7Z1M9 353 aa18.29■□□□□ 0.52
DDX55-212ENST00000544738 EIF5BO60841 1220 aaKnown RBP18.29■□□□□ 0.52
DDX55-212ENST00000544738 ATP4AP20648 1035 aa18.29■□□□□ 0.52
DDX55-212ENST00000544738 ANAPC15P60006 121 aa18.29■□□□□ 0.52
DDX55-212ENST00000544738 PAK2Q13177 524 aa18.29■□□□□ 0.52
DDX55-212ENST00000544738 ODR4Q5SWX8 454 aa18.29■□□□□ 0.52
DDX55-212ENST00000544738 PDE12Q6L8Q7 609 aaKnown RBP18.29■□□□□ 0.52
DDX55-212ENST00000544738 BLIDQ8IZY5 108 aa18.29■□□□□ 0.52
DDX55-212ENST00000544738 DAGLBQ8NCG7 672 aa18.29■□□□□ 0.52
DDX55-212ENST00000544738 FLCNQ8NFG4 579 aa18.29■□□□□ 0.52
DDX55-212ENST00000544738 KCNG4Q8TDN1 519 aa18.29■□□□□ 0.52
DDX55-212ENST00000544738 TBCKQ8TEA7 893 aa18.29■□□□□ 0.52
DDX55-212ENST00000544738 FAM167AQ96KS9 214 aa18.29■□□□□ 0.52
DDX55-212ENST00000544738 LARP6Q9BRS8 491 aaKnown RBP18.29■□□□□ 0.52
DDX55-212ENST00000544738 CEP131Q9UPN4 1083 aa18.29■□□□□ 0.52
DDX55-212ENST00000544738 MSH4O15457 936 aa18.28■□□□□ 0.52
DDX55-212ENST00000544738 ASGR2P07307 311 aa18.28■□□□□ 0.52
DDX55-212ENST00000544738 SFNP31947 248 aa18.28■□□□□ 0.52
DDX55-212ENST00000544738 CLCN5P51795 746 aa18.28■□□□□ 0.52
DDX55-212ENST00000544738 DGLUCYQ7Z3D6 616 aa18.28■□□□□ 0.52
DDX55-212ENST00000544738 KIAA0319LQ8IZA0 1049 aa18.28■□□□□ 0.52
DDX55-212ENST00000544738 SLKQ9H2G2 1235 aaPredicted RBP18.28■□□□□ 0.52
DDX55-212ENST00000544738 DISC1Q9NRI5 854 aa18.28■□□□□ 0.52
DDX55-212ENST00000544738 GABBR1Q9UBS5 961 aa18.28■□□□□ 0.52
DDX55-212ENST00000544738 FRYLO94915 3013 aa18.28■□□□□ 0.52
DDX55-212ENST00000544738 EPG5Q9HCE0 2579 aa18.28■□□□□ 0.52
DDX55-212ENST00000544738 NCOR2Q9Y618 2525 aa18.27■□□□□ 0.52
DDX55-212ENST00000544738 ZBTB42B2RXF5 422 aa18.27■□□□□ 0.52
DDX55-212ENST00000544738 FSCN2O14926 492 aa18.27■□□□□ 0.52
DDX55-212ENST00000544738 MAGEB2O15479 319 aa18.27■□□□□ 0.52
DDX55-212ENST00000544738 GAS7O60861 476 aa18.27■□□□□ 0.52
DDX55-212ENST00000544738 HOXB8P17481 243 aaPredicted RBP18.27■□□□□ 0.52
DDX55-212ENST00000544738 XBP1P17861 261 aa18.27■□□□□ 0.52
DDX55-212ENST00000544738 JAK3P52333 1124 aa18.27■□□□□ 0.52
DDX55-212ENST00000544738 NFX1Q12986 1120 aaKnown RBP18.27■□□□□ 0.52
DDX55-212ENST00000544738 KCNC3Q14003 757 aa18.27■□□□□ 0.52
DDX55-212ENST00000544738 ANKRD1Q15327 319 aa18.27■□□□□ 0.52
DDX55-212ENST00000544738 Q4G0T1 1027 aa18.27■□□□□ 0.52
DDX55-212ENST00000544738 FAM102BQ5T8I3 360 aa18.27■□□□□ 0.52
DDX55-212ENST00000544738 CES5AQ6NT32 575 aa18.27■□□□□ 0.52
DDX55-212ENST00000544738 SLC5A5Q92911 643 aa18.27■□□□□ 0.52
DDX55-212ENST00000544738 RMDN1Q96DB5 314 aa18.27■□□□□ 0.52
DDX55-212ENST00000544738 TEKT3Q9BXF9 490 aa18.27■□□□□ 0.52
DDX55-212ENST00000544738 POMKQ9H5K3 350 aa18.27■□□□□ 0.52
DDX55-212ENST00000544738 ENTPD7Q9NQZ7 604 aa18.27■□□□□ 0.52
DDX55-212ENST00000544738 NRBP2Q9NSY0 501 aa18.27■□□□□ 0.52
DDX55-212ENST00000544738 TYW1Q9NV66 732 aaKnown RBP18.27■□□□□ 0.52
DDX55-212ENST00000544738 RNF216Q9NWF9 866 aaPredicted RBP18.27■□□□□ 0.52
DDX55-212ENST00000544738 HCSTQ9UBK5 93 aa18.27■□□□□ 0.52
DDX55-212ENST00000544738 LIMD1Q9UGP4 676 aa18.27■□□□□ 0.52
DDX55-212ENST00000544738 PUF60Q9UHX1 559 aaKnown RBP18.27■□□□□ 0.52
DDX55-212ENST00000544738 TPRP12270 2363 aaKnown RBP18.26■□□□□ 0.51
DDX55-212ENST00000544738 CYP3A7-CYP3A51PA0A087WV96 503 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms