RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 PGK1P00558 417 aa10.55□□□□□ -0.72
YBX3-215ENST00000544504 RPN1P04843 607 aaKnown RBP10.55□□□□□ -0.72
YBX3-215ENST00000544504 GAP43P17677 238 aa10.55□□□□□ -0.72
YBX3-215ENST00000544504 CYP11B2P19099 503 aa10.55□□□□□ -0.72
YBX3-215ENST00000544504 GUCY2CP25092 1073 aa10.55□□□□□ -0.72
YBX3-215ENST00000544504 RFC5P40937 340 aa10.55□□□□□ -0.72
YBX3-215ENST00000544504 SARSP49591 514 aaKnown RBP10.55□□□□□ -0.72
YBX3-215ENST00000544504 NLRP12P59046 1061 aa10.55□□□□□ -0.72
YBX3-215ENST00000544504 TFF2Q03403 129 aa10.55□□□□□ -0.72
YBX3-215ENST00000544504 TYRO3Q06418 890 aa10.55□□□□□ -0.72
YBX3-215ENST00000544504 STIM1Q13586 685 aa10.55□□□□□ -0.72
YBX3-215ENST00000544504 UGCGQ16739 394 aa10.55□□□□□ -0.72
YBX3-215ENST00000544504 UTP14CQ5TAP6 766 aaKnown RBP10.55□□□□□ -0.72
YBX3-215ENST00000544504 UNC13DQ70J99 1090 aa10.55□□□□□ -0.72
YBX3-215ENST00000544504 TMEM199Q8N511 208 aa10.55□□□□□ -0.72
YBX3-215ENST00000544504 MLKLQ8NB16 471 aa10.55□□□□□ -0.72
YBX3-215ENST00000544504 MCPH1Q8NEM0 835 aa10.55□□□□□ -0.72
YBX3-215ENST00000544504 AFG1LQ8WV93 481 aa10.55□□□□□ -0.72
YBX3-215ENST00000544504 HERVK_113Q902F9 699 aa10.55□□□□□ -0.72
YBX3-215ENST00000544504 DDX12PQ92771 950 aa10.55□□□□□ -0.72
YBX3-215ENST00000544504 COPS5Q92905 334 aa10.55□□□□□ -0.72
YBX3-215ENST00000544504 TSEN34Q9BSV6 310 aaKnown RBP10.55□□□□□ -0.72
YBX3-215ENST00000544504 NIFKQ9BYG3 293 aaKnown RBP10.55□□□□□ -0.72
YBX3-215ENST00000544504 TSPY26PQ9H489 355 aa10.55□□□□□ -0.72
YBX3-215ENST00000544504 BCAS3Q9H6U6 928 aa10.55□□□□□ -0.72
YBX3-215ENST00000544504 STARD7Q9NQZ5 370 aa10.55□□□□□ -0.72
YBX3-215ENST00000544504 SEL1LQ9UBV2 794 aa10.55□□□□□ -0.72
YBX3-215ENST00000544504 SEPT9Q9UHD8 586 aaPredicted RBP10.55□□□□□ -0.72
YBX3-215ENST00000544504 COL4A3BPQ9Y5P4 624 aa10.55□□□□□ -0.72
YBX3-215ENST00000544504 MROH7Q68CQ1 1323 aa10.55□□□□□ -0.72
YBX3-215ENST00000544504 COL1A2P08123 1366 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 MYH9P35579 1960 aaKnown RBP10.54□□□□□ -0.72
YBX3-215ENST00000544504 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.54□□□□□ -0.72
YBX3-215ENST00000544504 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.54□□□□□ -0.72
YBX3-215ENST00000544504 MOXD2PA6NHM9 499 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 MYMKA6NI61 221 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 ZNF862O60290 1169 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 SORBS3O60504 671 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 GPR37L1O60883 481 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 DGAT1O75907 488 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 RHOBTB3O94955 611 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 LGALS2P05162 132 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 MMP3P08254 477 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 IDEP14735 1019 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 SCP2P22307 547 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 ABCD1P33897 745 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 RARRES1P49788 294 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 KCNQ1P51787 676 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 ACLYP53396 1101 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 GJA9P57773 515 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 PSMC6P62333 389 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 NKX3-2P78367 333 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 CUL4BQ13620 913 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 ZNF484Q5JVG2 852 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 RINT1Q6NUQ1 792 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 PADI6Q6TGC4 694 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 STXBP4Q6ZWJ1 553 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 ANO5Q75V66 913 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 ALYREFQ86V81 257 aaKnown RBP10.54□□□□□ -0.72
YBX3-215ENST00000544504 GRAMD1CQ8IYS0 662 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 ATP8B4Q8TF62 1192 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 STAMQ92783 540 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 CEP170P1Q96L14 293 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 DRC1Q96MC2 740 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 MTRQ99707 1265 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 KATNAL1Q9BW62 490 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 UPF3AQ9H1J1 476 aaKnown RBP10.54□□□□□ -0.72
YBX3-215ENST00000544504 MTIF3Q9H2K0 278 aaKnown RBP10.54□□□□□ -0.72
YBX3-215ENST00000544504 DOCK5Q9H7D0 1870 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 CYP26B1Q9NR63 512 aa10.54□□□□□ -0.72
YBX3-215ENST00000544504 WRAP73Q9P2S5 460 aaPredicted RBP10.54□□□□□ -0.72
YBX3-215ENST00000544504 H3BRB1 525 aa10.53□□□□□ -0.72
YBX3-215ENST00000544504 ADAMTS4O75173 837 aa10.53□□□□□ -0.72
YBX3-215ENST00000544504 FAM13AO94988 1023 aa10.53□□□□□ -0.72
YBX3-215ENST00000544504 PRR29P0C7W0 189 aa10.53□□□□□ -0.72
YBX3-215ENST00000544504 CSF2RAP15509 400 aa10.53□□□□□ -0.72
YBX3-215ENST00000544504 MORC3Q14149 939 aa10.53□□□□□ -0.72
YBX3-215ENST00000544504 FSCN1Q16658 493 aaKnown RBP10.53□□□□□ -0.72
YBX3-215ENST00000544504 ZNF658Q5TYW1 1059 aaPredicted RBP10.53□□□□□ -0.72
YBX3-215ENST00000544504 C1orf186Q6ZWK4 172 aa10.53□□□□□ -0.72
YBX3-215ENST00000544504 ZNF365Q70YC5 407 aa10.53□□□□□ -0.72
YBX3-215ENST00000544504 DYMQ7RTS9 669 aa10.53□□□□□ -0.72
YBX3-215ENST00000544504 MICALL1Q8N3F8 863 aa10.53□□□□□ -0.72
YBX3-215ENST00000544504 LRRC15Q8TF66 581 aa10.53□□□□□ -0.72
YBX3-215ENST00000544504 SLC7A3Q8WY07 619 aa10.53□□□□□ -0.72
YBX3-215ENST00000544504 KIFAP3Q92845 792 aa10.53□□□□□ -0.72
YBX3-215ENST00000544504 DNAJC19Q96DA6 116 aa10.53□□□□□ -0.72
YBX3-215ENST00000544504 SNX27Q96L92 541 aa10.53□□□□□ -0.72
YBX3-215ENST00000544504 PCYT2Q99447 389 aa10.53□□□□□ -0.72
YBX3-215ENST00000544504 BLZF1Q9H2G9 400 aa10.53□□□□□ -0.72
YBX3-215ENST00000544504 NKX2-4Q9H2Z4 354 aa10.53□□□□□ -0.72
YBX3-215ENST00000544504 TUT1Q9H6E5 874 aaKnown RBP10.53□□□□□ -0.72
YBX3-215ENST00000544504 C17orf75Q9HAS0 396 aa10.53□□□□□ -0.72
YBX3-215ENST00000544504 PANK4Q9NVE7 773 aa10.53□□□□□ -0.72
YBX3-215ENST00000544504 LARSQ9P2J5 1176 aaKnown RBP10.53□□□□□ -0.72
YBX3-215ENST00000544504 MAN1B1Q9UKM7 699 aa10.53□□□□□ -0.72
YBX3-215ENST00000544504 TRPC6Q9Y210 931 aa10.53□□□□□ -0.72
YBX3-215ENST00000544504 FRMD3A2A2Y4 597 aa10.52□□□□□ -0.73
YBX3-215ENST00000544504 RRN3P2A6NIE6 340 aa10.52□□□□□ -0.73
YBX3-215ENST00000544504 H0YCG3 227 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms