RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 ADAM22Q9P0K1 906 aa16.48■□□□□ 0.23
CHD4-210ENST00000544040 FAM95CA0A1B0GW59 222 aa16.48■□□□□ 0.23
CHD4-210ENST00000544040 PLEKHG3A1L390 1219 aa16.48■□□□□ 0.23
CHD4-210ENST00000544040 LRRC53A6NM62 1247 aa16.48■□□□□ 0.23
CHD4-210ENST00000544040 ATP5HO75947 161 aa16.48■□□□□ 0.23
CHD4-210ENST00000544040 USPL1Q5W0Q7 1092 aa16.48■□□□□ 0.23
CHD4-210ENST00000544040 GCFC2P16383 781 aaKnown RBP16.48■□□□□ 0.23
CHD4-210ENST00000544040 ARMCX2Q7L311 632 aa16.48■□□□□ 0.23
CHD4-210ENST00000544040 ATXN7L3BQ96GX2 97 aa16.48■□□□□ 0.23
CHD4-210ENST00000544040 PSAPP07602 524 aa16.48■□□□□ 0.23
CHD4-210ENST00000544040 VCAM1P19320 739 aa16.48■□□□□ 0.23
CHD4-210ENST00000544040 ADD2P35612 726 aa16.48■□□□□ 0.23
CHD4-210ENST00000544040 DYNC1I2Q13409 638 aaKnown RBP16.48■□□□□ 0.23
CHD4-210ENST00000544040 NBPF10Q6P3W6 841 aaKnown RBP16.48■□□□□ 0.23
CHD4-210ENST00000544040 ZSWIM5Q9P217 1185 aa16.48■□□□□ 0.23
CHD4-210ENST00000544040 ERVV-2B6SEH9 535 aa16.48■□□□□ 0.23
CHD4-210ENST00000544040 KRT38O76015 456 aa16.48■□□□□ 0.23
CHD4-210ENST00000544040 KRT4P19013 534 aa16.48■□□□□ 0.23
CHD4-210ENST00000544040 CARSP49589 748 aaKnown RBP16.48■□□□□ 0.23
CHD4-210ENST00000544040 MRPS15P82914 257 aaKnown RBP16.48■□□□□ 0.23
CHD4-210ENST00000544040 MIGA2Q7L4E1 593 aa16.48■□□□□ 0.23
CHD4-210ENST00000544040 THNSL1Q8IYQ7 743 aa16.48■□□□□ 0.23
CHD4-210ENST00000544040 B4GALNT2Q8NHY0 566 aa16.48■□□□□ 0.23
CHD4-210ENST00000544040 SEC31BQ9NQW1 1179 aa16.48■□□□□ 0.23
CHD4-210ENST00000544040 TRAF3IP3Q9Y228 551 aa16.48■□□□□ 0.23
CHD4-210ENST00000544040 PPEF1O14829 653 aaPredicted RBP16.47■□□□□ 0.23
CHD4-210ENST00000544040 PJA2O43164 708 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 BMP3P12645 472 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 DBNDD1Q9H9R9 158 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 E9PMD0 336 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 PPARGP37231 505 aaPredicted RBP16.47■□□□□ 0.23
CHD4-210ENST00000544040 CUL3Q13618 768 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 BHMT2Q9H2M3 363 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 MAFGO15525 162 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 SERPINI2O75830 405 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 PLEKHA8P1O95397 391 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 PDXDC2PQ6P474 469 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 ANO5Q75V66 913 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 DDIASQ8IXT1 998 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 RFWD2Q8NHY2 731 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 PCSK1NQ9UHG2 260 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 MYL1P05976 194 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 PHKG2P15735 406 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 CDC37Q16543 378 aaPredicted RBP16.47■□□□□ 0.23
CHD4-210ENST00000544040 ULK4Q96C45 1275 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 GJB4Q9NTQ9 266 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 POLIQ9UNA4 740 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 AURKCQ9UQB9 309 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 EIF2AK2P19525 551 aaKnown RBP16.47■□□□□ 0.23
CHD4-210ENST00000544040 HDAC4P56524 1084 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 NAA30Q147X3 362 aaPredicted RBP16.47■□□□□ 0.23
CHD4-210ENST00000544040 SLC27A3Q5K4L6 730 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 EXOC8Q8IYI6 725 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 ZBED8Q8IZ13 594 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 TEX12Q9BXU0 123 aa16.47■□□□□ 0.23
CHD4-210ENST00000544040 CCDC188H7C350 402 aa16.46■□□□□ 0.23
CHD4-210ENST00000544040 BRAFP15056 766 aa16.46■□□□□ 0.23
CHD4-210ENST00000544040 LRRC63Q05C16 580 aa16.46■□□□□ 0.23
CHD4-210ENST00000544040 CASS4Q9NQ75 786 aa16.46■□□□□ 0.23
CHD4-210ENST00000544040 CDV3Q9UKY7 258 aaKnown RBP16.46■□□□□ 0.23
CHD4-210ENST00000544040 SYNGAP1Q96PV0 1343 aa16.46■□□□□ 0.23
CHD4-210ENST00000544040 BZW1Q7L1Q6 419 aaKnown RBP16.46■□□□□ 0.23
CHD4-210ENST00000544040 ADNPQ9H2P0 1102 aa16.46■□□□□ 0.23
CHD4-210ENST00000544040 FBXL5Q9UKA1 691 aa16.46■□□□□ 0.23
CHD4-210ENST00000544040 SLC8A2Q9UPR5 921 aa16.46■□□□□ 0.23
CHD4-210ENST00000544040 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.46■□□□□ 0.23
CHD4-210ENST00000544040 EIF4G3O43432 1585 aaKnown RBP16.46■□□□□ 0.23
CHD4-210ENST00000544040 PRPF3O43395 683 aaKnown RBP16.46■□□□□ 0.23
CHD4-210ENST00000544040 PDIA2Q13087 525 aaKnown RBP16.46■□□□□ 0.23
CHD4-210ENST00000544040 KLHL38Q2WGJ6 581 aa16.46■□□□□ 0.23
CHD4-210ENST00000544040 NUP85Q9BW27 656 aa16.46■□□□□ 0.23
CHD4-210ENST00000544040 DIS3Q9Y2L1 958 aaKnown RBP16.46■□□□□ 0.23
CHD4-210ENST00000544040 UHRF1BP1Q6BDS2 1440 aa16.46■□□□□ 0.23
CHD4-210ENST00000544040 USP27XA6NNY8 438 aa16.46■□□□□ 0.23
CHD4-210ENST00000544040 SEMA3EO15041 775 aa16.46■□□□□ 0.23
CHD4-210ENST00000544040 TRPC1P48995 793 aa16.46■□□□□ 0.23
CHD4-210ENST00000544040 ALDH18A1P54886 795 aaKnown RBP16.46■□□□□ 0.23
CHD4-210ENST00000544040 AP1B1Q10567 949 aa16.46■□□□□ 0.23
CHD4-210ENST00000544040 GPS1Q13098 491 aa16.46■□□□□ 0.23
CHD4-210ENST00000544040 OSBPP22059 807 aa16.46■□□□□ 0.23
CHD4-210ENST00000544040 MAP3K7CLP57077 242 aa16.46■□□□□ 0.23
CHD4-210ENST00000544040 TTC8Q8TAM2 541 aa16.46■□□□□ 0.23
CHD4-210ENST00000544040 ZCWPW1Q9H0M4 648 aa16.46■□□□□ 0.23
CHD4-210ENST00000544040 FAM49AQ9H0Q0 323 aaPredicted RBP16.46■□□□□ 0.23
CHD4-210ENST00000544040 DDX47Q9H0S4 455 aaKnown RBP16.46■□□□□ 0.23
CHD4-210ENST00000544040 ARHGAP26Q9UNA1 814 aa16.46■□□□□ 0.23
CHD4-210ENST00000544040 BLMP54132 1417 aaPredicted RBP16.46■□□□□ 0.22
CHD4-210ENST00000544040 GCLMP48507 274 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 LRRC36Q1X8D7 754 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 SYCP2LQ5T4T6 812 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 CAPRIN2Q6IMN6 1127 aaKnown RBP16.45■□□□□ 0.22
CHD4-210ENST00000544040 PAWRQ96IZ0 340 aaKnown RBP16.45■□□□□ 0.22
CHD4-210ENST00000544040 ADAM33Q9BZ11 813 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 ZRANB2O95218 330 aaKnown RBP eCLIP16.45■□□□□ 0.22
CHD4-210ENST00000544040 OR9Q1Q8NGQ5 310 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 SCG3Q8WXD2 468 aaKnown RBP16.45■□□□□ 0.22
CHD4-210ENST00000544040 OSBP2Q969R2 916 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 TRAPPC8Q9Y2L5 1435 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 E5RI56 91 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 K7ERI5 159 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms