RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 SALL3Q9BXA9 1300 aa20.77■□□□□ 0.92
SUDS3-204ENST00000543473 IPO5O00410 1097 aaKnown RBP20.77■□□□□ 0.92
SUDS3-204ENST00000543473 C21orf2O43822 256 aa20.77■□□□□ 0.92
SUDS3-204ENST00000543473 GDF11O95390 407 aa20.77■□□□□ 0.92
SUDS3-204ENST00000543473 CHN1P15882 459 aa20.77■□□□□ 0.92
SUDS3-204ENST00000543473 UBXN2AP68543 259 aa20.77■□□□□ 0.92
SUDS3-204ENST00000543473 CDR2Q01850 454 aa20.77■□□□□ 0.92
SUDS3-204ENST00000543473 SLC27A3Q5K4L6 730 aa20.77■□□□□ 0.92
SUDS3-204ENST00000543473 TRAPPC11Q7Z392 1133 aa20.77■□□□□ 0.92
SUDS3-204ENST00000543473 PPARGC1AQ9UBK2 798 aaKnown RBP20.77■□□□□ 0.92
SUDS3-204ENST00000543473 ERVK-24P63145 666 aa20.77■□□□□ 0.91
SUDS3-204ENST00000543473 CCDC137Q6PK04 289 aaKnown RBP20.77■□□□□ 0.91
SUDS3-204ENST00000543473 A0A0G2JLW4 131 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 TTI1O43156 1089 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 P4HA1P13674 534 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 CAV1Q03135 178 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 DHX34Q14147 1143 aaKnown RBP20.76■□□□□ 0.91
SUDS3-204ENST00000543473 MMEL1Q495T6 779 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 PIP4K2CQ8TBX8 421 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 TTC17Q96AE7 1141 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 DYDC2Q96IM9 177 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 PRMT1Q99873 361 aaKnown RBP20.76■□□□□ 0.91
SUDS3-204ENST00000543473 DCTN4Q9UJW0 460 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 TCP11X1B4DZS4 312 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 SPAG7O75391 227 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 HAUS5O94927 633 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 RINT1Q6NUQ1 792 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 TRIM65Q6PJ69 517 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 SPATA21Q7Z572 469 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 GRAMD1AQ96CP6 724 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 SGSM3Q96HU1 749 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 ANAPC7Q9UJX3 599 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 ARL2BPQ9Y2Y0 163 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 DEPDC5O75140 1603 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 PNMA6FA0A0J9YX94 578 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 NOP56O00567 594 aaKnown RBP20.76■□□□□ 0.91
SUDS3-204ENST00000543473 TOM1L1O75674 476 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 RHOBTB3O94955 611 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 GARSP41250 739 aaKnown RBP20.76■□□□□ 0.91
SUDS3-204ENST00000543473 ESRRGP62508 458 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 GLYCTKQ8IVS8 523 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 HPS3Q969F9 1004 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 SCYL1Q96KG9 808 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 TMEM47Q9BQJ4 181 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 PHF20Q9BVI0 1012 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 KANSL2Q9H9L4 492 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 CD248Q9HCU0 757 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 GINM1Q9NU53 330 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 PNMA2Q9UL42 364 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 IQANK1A0A1B0GTG1 560 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 MCF2LO15068 1137 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 AGTP01019 485 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 IRX1P78414 480 aaPredicted RBP20.76■□□□□ 0.91
SUDS3-204ENST00000543473 MRPS9P82933 396 aaKnown RBP20.76■□□□□ 0.91
SUDS3-204ENST00000543473 RFFLQ8WZ73 363 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 FAM81BQ96LP2 452 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 ANKZF1Q9H8Y5 726 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 CD209Q9NNX6 404 aa20.76■□□□□ 0.91
SUDS3-204ENST00000543473 SASH3O75995 380 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 TMED1Q13445 227 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 HEMGNQ9BXL5 484 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 HPS5Q9UPZ3 1129 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 PPP1R3GB7ZBB8 358 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 RAD51CO43502 376 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 CREB3O43889 395 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 ZRANB2O95218 330 aaKnown RBP eCLIP20.75■□□□□ 0.91
SUDS3-204ENST00000543473 HSPA9P38646 679 aaKnown RBP20.75■□□□□ 0.91
SUDS3-204ENST00000543473 AGBL2Q5U5Z8 902 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 PPWD1Q96BP3 646 aaKnown RBP20.75■□□□□ 0.91
SUDS3-204ENST00000543473 CNOT8Q9UFF9 292 aaKnown RBP20.75■□□□□ 0.91
SUDS3-204ENST00000543473 SPECC1L-ADORA2AF8WAN1 911 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 CDK8P49336 464 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 PTPAQ15257 358 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 TMCO4Q5TGY1 634 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 DNAJC24Q6P3W2 148 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 HIPK4Q8NE63 616 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 ENO4A6NNW6 628 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 GOLGA8SH3BPF8 625 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 GPC4O75487 556 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 SAT1P21673 171 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 KNOP1Q1ED39 458 aaKnown RBP20.75■□□□□ 0.91
SUDS3-204ENST00000543473 ANKRD20A4Q4UJ75 823 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 BRDTQ58F21 947 aaPredicted RBP20.75■□□□□ 0.91
SUDS3-204ENST00000543473 ANKRD20A8PQ5CZ79 823 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 ANKRD20A2Q5SQ80 823 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 ANKRD20A1Q5TYW2 823 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 ATG16L1Q676U5 607 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 ANO3Q9BYT9 981 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 EPS15L1Q9UBC2 864 aa20.75■□□□□ 0.91
SUDS3-204ENST00000543473 CPP00450 1065 aa20.74■□□□□ 0.91
SUDS3-204ENST00000543473 STK4Q13043 487 aa20.74■□□□□ 0.91
SUDS3-204ENST00000543473 MKRN3Q13064 507 aaKnown RBP20.74■□□□□ 0.91
SUDS3-204ENST00000543473 DRAP1Q14919 205 aaPredicted RBP20.74■□□□□ 0.91
SUDS3-204ENST00000543473 SULF1Q8IWU6 871 aa20.74■□□□□ 0.91
SUDS3-204ENST00000543473 SLC17A8Q8NDX2 589 aa20.74■□□□□ 0.91
SUDS3-204ENST00000543473 YY1AP1Q9H869 796 aa20.74■□□□□ 0.91
SUDS3-204ENST00000543473 GEMIN8Q9NWZ8 242 aaKnown RBP20.74■□□□□ 0.91
SUDS3-204ENST00000543473 BARHL2Q9NY43 387 aa20.74■□□□□ 0.91
SUDS3-204ENST00000543473 GINS2Q9Y248 185 aa20.74■□□□□ 0.91
SUDS3-204ENST00000543473 HPSEQ9Y251 543 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms