RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 HOXC9P31274 260 aa20.61■□□□□ 0.89
HDAC4-215ENST00000543185 PLA2G4DQ86XP0 818 aa20.61■□□□□ 0.89
HDAC4-215ENST00000543185 CPXCR1Q8N123 301 aa20.61■□□□□ 0.89
HDAC4-215ENST00000543185 GNPATO15228 680 aa20.61■□□□□ 0.89
HDAC4-215ENST00000543185 DDX56Q9NY93 547 aaKnown RBP20.61■□□□□ 0.89
HDAC4-215ENST00000543185 LGALS16A8MUM7 142 aa20.61■□□□□ 0.89
HDAC4-215ENST00000543185 DNAJC6O75061 913 aa20.61■□□□□ 0.89
HDAC4-215ENST00000543185 ADCY1Q08828 1119 aa20.61■□□□□ 0.89
HDAC4-215ENST00000543185 ALKBH5Q6P6C2 394 aaKnown RBP20.61■□□□□ 0.89
HDAC4-215ENST00000543185 KSR1Q8IVT5 923 aa20.61■□□□□ 0.89
HDAC4-215ENST00000543185 SYBUQ9NX95 663 aa20.61■□□□□ 0.89
HDAC4-215ENST00000543185 PALMO75781 387 aa20.61■□□□□ 0.89
HDAC4-215ENST00000543185 ANO3Q9BYT9 981 aa20.61■□□□□ 0.89
HDAC4-215ENST00000543185 KIF23Q02241 960 aaPredicted RBP20.61■□□□□ 0.89
HDAC4-215ENST00000543185 ZBTB41Q5SVQ8 909 aa20.61■□□□□ 0.89
HDAC4-215ENST00000543185 LZTS3O60299 673 aaPredicted RBP20.61■□□□□ 0.89
HDAC4-215ENST00000543185 STRNO43815 780 aa20.6■□□□□ 0.89
HDAC4-215ENST00000543185 ADRM1Q16186 407 aa20.6■□□□□ 0.89
HDAC4-215ENST00000543185 TRIM72Q6ZMU5 477 aa20.6■□□□□ 0.89
HDAC4-215ENST00000543185 CEP95Q96GE4 821 aa20.6■□□□□ 0.89
HDAC4-215ENST00000543185 ELF1P32519 619 aa20.6■□□□□ 0.89
HDAC4-215ENST00000543185 BBS9Q3SYG4 887 aa20.6■□□□□ 0.89
HDAC4-215ENST00000543185 LRIG3Q6UXM1 1119 aa20.6■□□□□ 0.89
HDAC4-215ENST00000543185 PPP1R2P1Q96PQ5 205 aa20.6■□□□□ 0.89
HDAC4-215ENST00000543185 MRPL1Q9BYD6 325 aaKnown RBP20.6■□□□□ 0.89
HDAC4-215ENST00000543185 FOXP3Q9BZS1 431 aa20.6■□□□□ 0.89
HDAC4-215ENST00000543185 SLC4A7Q9Y6M7 1214 aa20.6■□□□□ 0.89
HDAC4-215ENST00000543185 MYO1DO94832 1006 aa20.6■□□□□ 0.89
HDAC4-215ENST00000543185 BYSLQ13895 437 aaKnown RBP20.6■□□□□ 0.89
HDAC4-215ENST00000543185 CLIC6Q96NY7 704 aa20.6■□□□□ 0.89
HDAC4-215ENST00000543185 AP1M1Q9BXS5 423 aa20.6■□□□□ 0.89
HDAC4-215ENST00000543185 PSD3Q9NYI0 1048 aa20.6■□□□□ 0.89
HDAC4-215ENST00000543185 DYNLT1P63172 113 aa20.6■□□□□ 0.89
HDAC4-215ENST00000543185 TRIM62Q9BVG3 475 aa20.6■□□□□ 0.89
HDAC4-215ENST00000543185 OCM2P0CE71 109 aa20.6■□□□□ 0.89
HDAC4-215ENST00000543185 OCMP0CE72 109 aaPredicted RBP20.6■□□□□ 0.89
HDAC4-215ENST00000543185 SOX5P35711 763 aa20.6■□□□□ 0.89
HDAC4-215ENST00000543185 ZAP70P43403 619 aa20.6■□□□□ 0.89
HDAC4-215ENST00000543185 DPP8Q6V1X1 898 aaPredicted RBP20.6■□□□□ 0.89
HDAC4-215ENST00000543185 TRIM69Q86WT6 500 aa20.6■□□□□ 0.89
HDAC4-215ENST00000543185 KMT5AQ9NQR1 393 aa20.6■□□□□ 0.89
HDAC4-215ENST00000543185 NCAPG2Q86XI2 1143 aa20.6■□□□□ 0.89
HDAC4-215ENST00000543185 ASCC2Q9H1I8 757 aaPredicted RBP20.6■□□□□ 0.89
HDAC4-215ENST00000543185 GEMIN8Q9NWZ8 242 aaKnown RBP20.6■□□□□ 0.89
HDAC4-215ENST00000543185 EIF3HO15372 352 aaKnown RBP eCLIP20.6■□□□□ 0.89
HDAC4-215ENST00000543185 TBXAS1P24557 533 aaPredicted RBP20.6■□□□□ 0.89
HDAC4-215ENST00000543185 HIPK4Q8NE63 616 aa20.6■□□□□ 0.89
HDAC4-215ENST00000543185 FIS1Q9Y3D6 152 aa20.6■□□□□ 0.89
HDAC4-215ENST00000543185 GOLGA8RI6L899 631 aa20.59■□□□□ 0.89
HDAC4-215ENST00000543185 ZRANB2O95218 330 aaKnown RBP eCLIP20.59■□□□□ 0.89
HDAC4-215ENST00000543185 MECOMQ03112 1051 aa20.59■□□□□ 0.89
HDAC4-215ENST00000543185 ANGPT2O15123 496 aa20.59■□□□□ 0.89
HDAC4-215ENST00000543185 PGM1P36871 562 aa20.59■□□□□ 0.89
HDAC4-215ENST00000543185 IMPG1Q17R60 797 aa20.59■□□□□ 0.89
HDAC4-215ENST00000543185 GPIHBP1Q8IV16 184 aa20.59■□□□□ 0.89
HDAC4-215ENST00000543185 TMEM245Q9H330 911 aa20.59■□□□□ 0.89
HDAC4-215ENST00000543185 KIAA1586Q9HCI6 787 aa20.59■□□□□ 0.89
HDAC4-215ENST00000543185 ZNF263O14978 683 aa20.59■□□□□ 0.89
HDAC4-215ENST00000543185 ACADSP16219 412 aa20.59■□□□□ 0.89
HDAC4-215ENST00000543185 ITPRIPL1Q6GPH6 555 aa20.59■□□□□ 0.89
HDAC4-215ENST00000543185 GAS2L3Q86XJ1 694 aa20.59■□□□□ 0.89
HDAC4-215ENST00000543185 JAG2Q9Y219 1238 aa20.59■□□□□ 0.89
HDAC4-215ENST00000543185 EYA1Q99502 592 aa20.59■□□□□ 0.89
HDAC4-215ENST00000543185 AGTP01019 485 aa20.59■□□□□ 0.89
HDAC4-215ENST00000543185 MAPKAPK5Q8IW41 473 aa20.59■□□□□ 0.89
HDAC4-215ENST00000543185 SMCR8Q8TEV9 937 aaPredicted RBP20.59■□□□□ 0.89
HDAC4-215ENST00000543185 PARD3BQ8TEW8 1205 aa20.59■□□□□ 0.89
HDAC4-215ENST00000543185 ADD3Q9UEY8 706 aaKnown RBP20.59■□□□□ 0.89
HDAC4-215ENST00000543185 SEPT9Q9UHD8 586 aaPredicted RBP20.59■□□□□ 0.89
HDAC4-215ENST00000543185 PKP1Q13835 747 aa20.59■□□□□ 0.89
HDAC4-215ENST00000543185 GINM1Q9NU53 330 aa20.59■□□□□ 0.89
HDAC4-215ENST00000543185 TNNQ9UQP3 1299 aa20.59■□□□□ 0.89
HDAC4-215ENST00000543185 SPOUT1Q5T280 376 aaKnown RBP20.59■□□□□ 0.89
HDAC4-215ENST00000543185 SUCLG2Q96I99 432 aa20.59■□□□□ 0.89
HDAC4-215ENST00000543185 GPR108Q9NPR9 543 aa20.59■□□□□ 0.89
HDAC4-215ENST00000543185 ADGRL2O95490 1459 aa20.59■□□□□ 0.89
HDAC4-215ENST00000543185 WDR19Q8NEZ3 1342 aa20.59■□□□□ 0.89
HDAC4-215ENST00000543185 hCG_1642624A0A1W2PR95 340 aa20.58■□□□□ 0.89
HDAC4-215ENST00000543185 ZNF839A8K0R7 811 aa20.58■□□□□ 0.89
HDAC4-215ENST00000543185 KHDRBS2Q5VWX1 349 aaKnown RBP20.58■□□□□ 0.89
HDAC4-215ENST00000543185 ZNF577Q9BSK1 485 aa20.58■□□□□ 0.89
HDAC4-215ENST00000543185 MRPS25P82663 173 aaKnown RBP20.58■□□□□ 0.89
HDAC4-215ENST00000543185 ITSN1Q15811 1721 aa20.58■□□□□ 0.89
HDAC4-215ENST00000543185 RIMBP2O15034 1052 aa20.58■□□□□ 0.89
HDAC4-215ENST00000543185 NR5A1Q13285 461 aa20.58■□□□□ 0.89
HDAC4-215ENST00000543185 GPKOWQ92917 476 aaPredicted RBP eCLIP20.58■□□□□ 0.89
HDAC4-215ENST00000543185 TADA1Q96BN2 335 aa20.58■□□□□ 0.89
HDAC4-215ENST00000543185 NSMCE4AQ9NXX6 385 aa20.58■□□□□ 0.89
HDAC4-215ENST00000543185 ADAMTS12P58397 1594 aa20.58■□□□□ 0.89
HDAC4-215ENST00000543185 TOGARAM2Q6ZUX3 1019 aa20.58■□□□□ 0.89
HDAC4-215ENST00000543185 SETD3Q86TU7 594 aaPredicted RBP20.58■□□□□ 0.89
HDAC4-215ENST00000543185 CATSPER3Q86XQ3 398 aa20.58■□□□□ 0.89
HDAC4-215ENST00000543185 CCDC17Q96LX7 622 aa20.58■□□□□ 0.89
HDAC4-215ENST00000543185 LRRC4Q9HBW1 653 aa20.58■□□□□ 0.89
HDAC4-215ENST00000543185 STAT4Q14765 748 aa20.58■□□□□ 0.88
HDAC4-215ENST00000543185 KCNK16Q96T55 309 aa20.58■□□□□ 0.88
HDAC4-215ENST00000543185 DCDC2Q9UHG0 476 aa20.58■□□□□ 0.88
HDAC4-215ENST00000543185 LRRIQ3A6PVS8 624 aaPredicted RBP20.58■□□□□ 0.88
HDAC4-215ENST00000543185 RCAN1P53805 252 aa20.58■□□□□ 0.88
HDAC4-215ENST00000543185 PTK2BQ14289 1009 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms