RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 ASGR1P07306 291 aa11.79□□□□□ -0.52
DDB1-221ENST00000543162 SMIM10L2AP0DMW4 78 aa11.79□□□□□ -0.52
DDB1-221ENST00000543162 SMIM10L2BP0DMW5 78 aa11.79□□□□□ -0.52
DDB1-221ENST00000543162 KLRC1P26715 233 aa11.79□□□□□ -0.52
DDB1-221ENST00000543162 ERCC5P28715 1186 aaPredicted RBP11.79□□□□□ -0.52
DDB1-221ENST00000543162 DNM2P50570 870 aa11.79□□□□□ -0.52
DDB1-221ENST00000543162 PEX3P56589 373 aa11.79□□□□□ -0.52
DDB1-221ENST00000543162 SOX10P56693 466 aa11.79□□□□□ -0.52
DDB1-221ENST00000543162 RTP1P59025 263 aa11.79□□□□□ -0.52
DDB1-221ENST00000543162 DMP1Q13316 513 aaPredicted RBP11.79□□□□□ -0.52
DDB1-221ENST00000543162 LRRC41Q15345 812 aa11.79□□□□□ -0.52
DDB1-221ENST00000543162 KCNA10Q16322 511 aa11.79□□□□□ -0.52
DDB1-221ENST00000543162 PKN2Q16513 984 aaKnown RBP11.79□□□□□ -0.52
DDB1-221ENST00000543162 COBLL1Q53SF7 1204 aa11.79□□□□□ -0.52
DDB1-221ENST00000543162 IER5Q5VY09 327 aa11.79□□□□□ -0.52
DDB1-221ENST00000543162 LHX8Q68G74 356 aa11.79□□□□□ -0.52
DDB1-221ENST00000543162 FBXO46Q6PJ61 603 aaPredicted RBP11.79□□□□□ -0.52
DDB1-221ENST00000543162 STXBP4Q6ZWJ1 553 aa11.79□□□□□ -0.52
DDB1-221ENST00000543162 MYOCDQ8IZQ8 938 aa11.79□□□□□ -0.52
DDB1-221ENST00000543162 GUF1Q8N442 669 aaKnown RBP11.79□□□□□ -0.52
DDB1-221ENST00000543162 DHTKD1Q96HY7 919 aaPredicted RBP11.79□□□□□ -0.52
DDB1-221ENST00000543162 SUGCTQ9HAC7 445 aa11.79□□□□□ -0.52
DDB1-221ENST00000543162 CTNND2Q9UQB3 1225 aa11.79□□□□□ -0.52
DDB1-221ENST00000543162 NRCAMQ92823 1304 aa11.79□□□□□ -0.52
DDB1-221ENST00000543162 KAT6AQ92794 2004 aa11.79□□□□□ -0.52
DDB1-221ENST00000543162 IGKV6-21A0A0C4DH24 114 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 FSD2A1L4K1 749 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 CCDC169A6NNP5 214 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 BECN2A8MW95 431 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 K7ENM7 598 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 MYCP01106 439 aaPredicted RBP11.78□□□□□ -0.52
DDB1-221ENST00000543162 MYBP10242 640 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 MAPTP10636 758 aaKnown RBP11.78□□□□□ -0.52
DDB1-221ENST00000543162 CCL5P13501 91 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 NMT1P30419 496 aaKnown RBP11.78□□□□□ -0.52
DDB1-221ENST00000543162 ARL2P36404 184 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 SMTNP53814 917 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 PAK1Q13153 545 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 PPP2R5AQ15172 486 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 CCSAPQ6IQ19 270 aaPredicted RBP11.78□□□□□ -0.52
DDB1-221ENST00000543162 EFCAB12Q6NXP0 572 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 MTHFD1LQ6UB35 978 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 ZNF720Q7Z2F6 126 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 LUZP1Q86V48 1076 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 LRRC71Q8N4P6 559 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 AOPEPQ8N6M6 819 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 METTL13Q8N6R0 699 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 C7orf31Q8N865 590 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 ARRDC4Q8NCT1 418 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 SLC17A8Q8NDX2 589 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 GLIS3Q8NEA6 775 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 LMBR1Q8WVP7 490 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 SPIRE2Q8WWL2 714 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 NELFBQ8WX92 580 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 PSPC1Q8WXF1 523 aaKnown RBP11.78□□□□□ -0.52
DDB1-221ENST00000543162 FGFBP2Q9BYJ0 223 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 KMT5AQ9NQR1 393 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 SETD4Q9NVD3 440 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 KCNG1Q9UIX4 513 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 RWDD2AQ9UIY3 292 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 CEP350Q5VT06 3117 aa11.78□□□□□ -0.52
DDB1-221ENST00000543162 SMTNL1A8MU46 457 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 GOLGA6L19H0YKK7 550 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 IKBKBO14920 756 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 EIF3DO15371 548 aaKnown RBP eCLIP11.77□□□□□ -0.53
DDB1-221ENST00000543162 SLC16A4O15374 487 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 CABYRO75952 493 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 GNAT1P11488 350 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 GLRA2P23416 452 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 TMOD1P28289 359 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 NPTX2P47972 431 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 CLCN3P51790 818 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 CASP5P51878 434 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 ACLYP53396 1101 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 STX17P56962 302 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 MYL5Q02045 173 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 ALCAMQ13740 583 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 MXD4Q14582 209 aaPredicted RBP11.77□□□□□ -0.53
DDB1-221ENST00000543162 IQCB1Q15051 598 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 MTFR1Q15390 333 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 NBPF20Q3BBV1 942 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 MARCH8Q5T0T0 291 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 EPM2AIP1Q7L775 607 aaPredicted RBP11.77□□□□□ -0.53
DDB1-221ENST00000543162 DHX40Q8IX18 779 aaKnown RBP11.77□□□□□ -0.53
DDB1-221ENST00000543162 ENOX1Q8TC92 643 aaKnown RBP11.77□□□□□ -0.53
DDB1-221ENST00000543162 ASAP3Q8TDY4 903 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 PPP1R13LQ8WUF5 828 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 SCFD1Q8WVM8 642 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 PRPF31Q8WWY3 499 aaKnown RBP11.77□□□□□ -0.53
DDB1-221ENST00000543162 BSNDQ8WZ55 320 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 P2RX5Q93086 422 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 VTI1AQ96AJ9 217 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 ZBTB10Q96DT7 871 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 FIZ1Q96SL8 496 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 NTPCRQ9BSD7 190 aaKnown RBP11.77□□□□□ -0.53
DDB1-221ENST00000543162 TSEN34Q9BSV6 310 aaKnown RBP11.77□□□□□ -0.53
DDB1-221ENST00000543162 RNF208Q9H0X6 261 aa11.77□□□□□ -0.53
DDB1-221ENST00000543162 PAK6Q9NQU5 681 aaPredicted RBP11.77□□□□□ -0.53
DDB1-221ENST00000543162 SUCLA2Q9P2R7 463 aaPredicted RBP11.77□□□□□ -0.53
DDB1-221ENST00000543162 HDAC6Q9UBN7 1215 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms